RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 BARD1Q99728 777 aaKnown RBP12.9□□□□□ -0.34
SPTBN1-205ENST00000496323 MAP3K3Q99759 626 aa12.9□□□□□ -0.34
SPTBN1-205ENST00000496323 IER2Q9BTL4 223 aa12.9□□□□□ -0.34
SPTBN1-205ENST00000496323 SOX17Q9H6I2 414 aaPredicted RBP12.9□□□□□ -0.34
SPTBN1-205ENST00000496323 SMURF2Q9HAU4 748 aa12.9□□□□□ -0.34
SPTBN1-205ENST00000496323 ZCCHC3Q9NUD5 404 aaKnown RBP12.9□□□□□ -0.34
SPTBN1-205ENST00000496323 THEGQ9P2T0 379 aa12.9□□□□□ -0.34
SPTBN1-205ENST00000496323 SCOCQ9UIL1 159 aa12.9□□□□□ -0.34
SPTBN1-205ENST00000496323 ENTPD4Q9Y227 616 aa12.9□□□□□ -0.34
SPTBN1-205ENST00000496323 MUC3AQ02505 3323 aa12.9□□□□□ -0.34
SPTBN1-205ENST00000496323 PRAMEF27A3QJZ7 478 aa12.89□□□□□ -0.35
SPTBN1-205ENST00000496323 PRAMEF25A6NGN4 478 aa12.89□□□□□ -0.35
SPTBN1-205ENST00000496323 CPN2P22792 545 aa12.89□□□□□ -0.35
SPTBN1-205ENST00000496323 HOXA6P31267 233 aa12.89□□□□□ -0.35
SPTBN1-205ENST00000496323 SIM1P81133 766 aaPredicted RBP12.89□□□□□ -0.35
SPTBN1-205ENST00000496323 ZXDAP98168 799 aa12.89□□□□□ -0.35
SPTBN1-205ENST00000496323 C14orf28Q4W4Y0 310 aa12.89□□□□□ -0.35
SPTBN1-205ENST00000496323 RPS26P11Q5JNZ5 115 aaPredicted RBP12.89□□□□□ -0.35
SPTBN1-205ENST00000496323 OR2T5Q6IEZ7 315 aa12.89□□□□□ -0.35
SPTBN1-205ENST00000496323 KLHL35Q6PF15 583 aa12.89□□□□□ -0.35
SPTBN1-205ENST00000496323 TMEM107Q6UX40 140 aa12.89□□□□□ -0.35
SPTBN1-205ENST00000496323 TMEM64Q6YI46 380 aa12.89□□□□□ -0.35
SPTBN1-205ENST00000496323 FAM92BQ6ZTR7 304 aa12.89□□□□□ -0.35
SPTBN1-205ENST00000496323 SDR16C5Q8N3Y7 309 aa12.89□□□□□ -0.35
SPTBN1-205ENST00000496323 SVOPLQ8N434 492 aa12.89□□□□□ -0.35
SPTBN1-205ENST00000496323 OR5T3Q8NGG3 340 aa12.89□□□□□ -0.35
SPTBN1-205ENST00000496323 OR9A2Q8NGT5 310 aa12.89□□□□□ -0.35
SPTBN1-205ENST00000496323 OR2T29Q8NH02 315 aa12.89□□□□□ -0.35
SPTBN1-205ENST00000496323 TBC1D20Q96BZ9 403 aa12.89□□□□□ -0.35
SPTBN1-205ENST00000496323 MAGED4Q96JG8 741 aa12.89□□□□□ -0.35
SPTBN1-205ENST00000496323 OSBPL10Q9BXB5 764 aa12.89□□□□□ -0.35
SPTBN1-205ENST00000496323 RSPO3Q9BXY4 272 aaPredicted RBP12.89□□□□□ -0.35
SPTBN1-205ENST00000496323 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.89□□□□□ -0.35
SPTBN1-205ENST00000496323 ZSCAN32Q9NX65 697 aa12.89□□□□□ -0.35
SPTBN1-205ENST00000496323 PHF11Q9UIL8 331 aa12.89□□□□□ -0.35
SPTBN1-205ENST00000496323 ANGPT4Q9Y264 503 aa12.89□□□□□ -0.35
SPTBN1-205ENST00000496323 SLC22A7Q9Y694 548 aa12.89□□□□□ -0.35
SPTBN1-205ENST00000496323 ABCA7Q8IZY2 2146 aa12.89□□□□□ -0.35
SPTBN1-205ENST00000496323 A6NHS1 94 aa12.89□□□□□ -0.35
SPTBN1-205ENST00000496323 GALR3O60755 368 aaPredicted RBP12.89□□□□□ -0.35
SPTBN1-205ENST00000496323 TDGF1P13385 188 aa12.89□□□□□ -0.35
SPTBN1-205ENST00000496323 TNFRSF1BP20333 461 aa12.89□□□□□ -0.35
SPTBN1-205ENST00000496323 PRKACGP22612 351 aa12.89□□□□□ -0.35
SPTBN1-205ENST00000496323 BUD31P41223 144 aaPredicted RBP12.89□□□□□ -0.35
SPTBN1-205ENST00000496323 ELOAQ14241 798 aaKnown RBP12.89□□□□□ -0.35
SPTBN1-205ENST00000496323 OR52E8Q6IFG1 317 aa12.89□□□□□ -0.35
SPTBN1-205ENST00000496323 REEP3Q6NUK4 255 aa12.89□□□□□ -0.35
SPTBN1-205ENST00000496323 CEP68Q76N32 757 aa12.89□□□□□ -0.35
SPTBN1-205ENST00000496323 SZRD1Q7Z422 152 aa12.89□□□□□ -0.35
SPTBN1-205ENST00000496323 MCATQ8IVS2 390 aaKnown RBP12.89□□□□□ -0.35
SPTBN1-205ENST00000496323 SLC25A45Q8N413 288 aa12.89□□□□□ -0.35
SPTBN1-205ENST00000496323 DNAJC22Q8N4W6 341 aa12.89□□□□□ -0.35
SPTBN1-205ENST00000496323 OR5D16Q8NGK9 328 aa12.89□□□□□ -0.35
SPTBN1-205ENST00000496323 OR5K1Q8NHB7 308 aa12.89□□□□□ -0.35
SPTBN1-205ENST00000496323 TMEM19Q96HH6 336 aa12.89□□□□□ -0.35
SPTBN1-205ENST00000496323 ANKRA2Q9H9E1 313 aa12.89□□□□□ -0.35
SPTBN1-205ENST00000496323 LYRM4Q9HD34 91 aa12.89□□□□□ -0.35
SPTBN1-205ENST00000496323 NAALAD2Q9Y3Q0 740 aa12.89□□□□□ -0.35
SPTBN1-205ENST00000496323 DPPA5A6NC42 116 aa12.88□□□□□ -0.35
SPTBN1-205ENST00000496323 SMNDC1O75940 238 aaKnown RBP eCLIP12.88□□□□□ -0.35
SPTBN1-205ENST00000496323 CLIC3O95833 236 aa12.88□□□□□ -0.35
SPTBN1-205ENST00000496323 BCHEP06276 602 aa12.88□□□□□ -0.35
SPTBN1-205ENST00000496323 GIMD1P0DJR0 217 aa12.88□□□□□ -0.35
SPTBN1-205ENST00000496323 OR12D1P0DN82 309 aa12.88□□□□□ -0.35
SPTBN1-205ENST00000496323 MPIP34949 423 aa12.88□□□□□ -0.35
SPTBN1-205ENST00000496323 GFERP55789 205 aa12.88□□□□□ -0.35
SPTBN1-205ENST00000496323 BNC1Q01954 994 aa12.88□□□□□ -0.35
SPTBN1-205ENST00000496323 BNIP3Q12983 259 aa12.88□□□□□ -0.35
SPTBN1-205ENST00000496323 SRSF5Q13243 272 aaKnown RBP12.88□□□□□ -0.35
SPTBN1-205ENST00000496323 BIRC2Q13490 618 aa12.88□□□□□ -0.35
SPTBN1-205ENST00000496323 LTB4RQ15722 352 aa12.88□□□□□ -0.35
SPTBN1-205ENST00000496323 OR4N5Q8IXE1 308 aa12.88□□□□□ -0.35
SPTBN1-205ENST00000496323 ZNF655Q8N720 491 aaPredicted RBP12.88□□□□□ -0.35
SPTBN1-205ENST00000496323 SMYD1Q8NB12 490 aa12.88□□□□□ -0.35
SPTBN1-205ENST00000496323 ELP4Q96EB1 424 aa12.88□□□□□ -0.35
SPTBN1-205ENST00000496323 FBXL20Q96IG2 436 aa12.88□□□□□ -0.35
SPTBN1-205ENST00000496323 SLC35G5Q96KT7 338 aa12.88□□□□□ -0.35
SPTBN1-205ENST00000496323 CCDC3Q9BQI4 270 aa12.88□□□□□ -0.35
SPTBN1-205ENST00000496323 OR51I1Q9H343 314 aa12.88□□□□□ -0.35
SPTBN1-205ENST00000496323 SEMA3GQ9NS98 782 aa12.88□□□□□ -0.35
SPTBN1-205ENST00000496323 PSME2Q9UL46 239 aa12.88□□□□□ -0.35
SPTBN1-205ENST00000496323 RAB23Q9ULC3 237 aa12.88□□□□□ -0.35
SPTBN1-205ENST00000496323 PADI2Q9Y2J8 665 aa12.88□□□□□ -0.35
SPTBN1-205ENST00000496323 ZNF780BQ9Y6R6 833 aa12.88□□□□□ -0.35
SPTBN1-205ENST00000496323 RNF215Q9Y6U7 377 aa12.88□□□□□ -0.35
SPTBN1-205ENST00000496323 CCDC163A0A0D9SF12 145 aa12.88□□□□□ -0.35
SPTBN1-205ENST00000496323 MYOCOSA0A1B0GUC4 107 aa12.88□□□□□ -0.35
SPTBN1-205ENST00000496323 CYR61O00622 381 aa12.88□□□□□ -0.35
SPTBN1-205ENST00000496323 E2F6O75461 281 aa12.88□□□□□ -0.35
SPTBN1-205ENST00000496323 PGM3O95394 542 aa12.88□□□□□ -0.35
SPTBN1-205ENST00000496323 HPRP00739 348 aa12.88□□□□□ -0.35
SPTBN1-205ENST00000496323 NELFEP18615 380 aaKnown RBP12.88□□□□□ -0.35
SPTBN1-205ENST00000496323 ZNF10P21506 573 aaPredicted RBP12.88□□□□□ -0.35
SPTBN1-205ENST00000496323 MC3RP41968 323 aa12.88□□□□□ -0.35
SPTBN1-205ENST00000496323 PRKAG1P54619 331 aa12.88□□□□□ -0.35
SPTBN1-205ENST00000496323 ADARB1P78563 741 aaKnown RBP12.88□□□□□ -0.35
SPTBN1-205ENST00000496323 LAPTM4AQ15012 233 aa12.88□□□□□ -0.35
SPTBN1-205ENST00000496323 SHBQ15464 509 aa12.88□□□□□ -0.35
SPTBN1-205ENST00000496323 PRTGQ2VWP7 1150 aa12.88□□□□□ -0.35
SPTBN1-205ENST00000496323 CYP27C1Q4G0S4 372 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms