RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 STX1AQ16623 288 aa3.15□□□□□ -1.91
CLK1-214ENST00000496205 RABL6Q3YEC7 729 aaPredicted RBP3.15□□□□□ -1.91
CLK1-214ENST00000496205 HERC4Q5GLZ8 1057 aaPredicted RBP3.15□□□□□ -1.91
CLK1-214ENST00000496205 ATAD3BQ5T9A4 648 aa3.15□□□□□ -1.91
CLK1-214ENST00000496205 CENPPQ6IPU0 288 aa3.15□□□□□ -1.91
CLK1-214ENST00000496205 DLEU7Q6UYE1 221 aa3.15□□□□□ -1.91
CLK1-214ENST00000496205 ZNF497Q6ZNH5 498 aa3.15□□□□□ -1.91
CLK1-214ENST00000496205 ADGRD2Q7Z7M1 963 aa3.15□□□□□ -1.91
CLK1-214ENST00000496205 CACUL1Q86Y37 369 aa3.15□□□□□ -1.91
CLK1-214ENST00000496205 SLC22A15Q8IZD6 547 aa3.15□□□□□ -1.91
CLK1-214ENST00000496205 OR6S1Q8NH40 331 aa3.15□□□□□ -1.91
CLK1-214ENST00000496205 GLYATL1Q969I3 302 aa3.15□□□□□ -1.91
CLK1-214ENST00000496205 CXorf58Q96LI9 332 aa3.15□□□□□ -1.91
CLK1-214ENST00000496205 GUCD1Q96NT3 240 aa3.15□□□□□ -1.91
CLK1-214ENST00000496205 IL12RB2Q99665 862 aa3.15□□□□□ -1.91
CLK1-214ENST00000496205 OVOL2Q9BRP0 275 aa3.15□□□□□ -1.91
CLK1-214ENST00000496205 UBAC1Q9BSL1 405 aa3.15□□□□□ -1.91
CLK1-214ENST00000496205 CCM2Q9BSQ5 444 aa3.15□□□□□ -1.91
CLK1-214ENST00000496205 TPPP3Q9BW30 176 aa3.15□□□□□ -1.91
CLK1-214ENST00000496205 RBM4Q9BWF3 364 aaKnown RBP3.15□□□□□ -1.91
CLK1-214ENST00000496205 LRRC2Q9BYS8 371 aa3.15□□□□□ -1.91
CLK1-214ENST00000496205 POLR1EQ9GZS1 481 aaKnown RBP3.15□□□□□ -1.91
CLK1-214ENST00000496205 DCLRE1BQ9H816 532 aa3.15□□□□□ -1.91
CLK1-214ENST00000496205 COQ10BQ9H8M1 238 aa3.15□□□□□ -1.91
CLK1-214ENST00000496205 C3orf14Q9HBI5 128 aa3.15□□□□□ -1.91
CLK1-214ENST00000496205 TECRQ9NZ01 308 aaKnown RBP3.15□□□□□ -1.91
CLK1-214ENST00000496205 DNPEPQ9ULA0 475 aa3.15□□□□□ -1.91
CLK1-214ENST00000496205 CAB39Q9Y376 341 aaPredicted RBP3.15□□□□□ -1.91
CLK1-214ENST00000496205 NPC1L1Q9UHC9 1359 aa3.14□□□□□ -1.91
CLK1-214ENST00000496205 NCAPD2Q15021 1401 aa3.14□□□□□ -1.91
CLK1-214ENST00000496205 A0A087WZY1 265 aa3.14□□□□□ -1.91
CLK1-214ENST00000496205 A0A0U1RRA0 63 aa3.14□□□□□ -1.91
CLK1-214ENST00000496205 hCG_38984A0A1B0GV85 526 aa3.14□□□□□ -1.91
CLK1-214ENST00000496205 MACROD2A1Z1Q3 448 aa3.14□□□□□ -1.91
CLK1-214ENST00000496205 E2F3O00716 465 aa3.14□□□□□ -1.91
CLK1-214ENST00000496205 SURF4O15260 269 aa3.14□□□□□ -1.91
CLK1-214ENST00000496205 ADAM12O43184 909 aa3.14□□□□□ -1.91
CLK1-214ENST00000496205 ANGPTL1O95841 491 aa3.14□□□□□ -1.91
CLK1-214ENST00000496205 AK1P00568 194 aa3.14□□□□□ -1.91
CLK1-214ENST00000496205 IGHEP01854 428 aa3.14□□□□□ -1.91
CLK1-214ENST00000496205 ZSCAN5DPP0CG00 497 aa3.14□□□□□ -1.91
CLK1-214ENST00000496205 NCF1P14598 390 aaPredicted RBP3.14□□□□□ -1.91
CLK1-214ENST00000496205 MYOGP15173 224 aa3.14□□□□□ -1.91
CLK1-214ENST00000496205 CYP3A5P20815 502 aa3.14□□□□□ -1.91
CLK1-214ENST00000496205 GLRA1P23415 457 aa3.14□□□□□ -1.91
CLK1-214ENST00000496205 AKT2P31751 481 aa3.14□□□□□ -1.91
CLK1-214ENST00000496205 OTX2P32243 289 aa3.14□□□□□ -1.91
CLK1-214ENST00000496205 FEN1P39748 380 aaKnown RBP3.14□□□□□ -1.91
CLK1-214ENST00000496205 SLC6A12P48065 614 aa3.14□□□□□ -1.91
CLK1-214ENST00000496205 NUMBP49757 651 aa3.14□□□□□ -1.91
CLK1-214ENST00000496205 HNRNPFP52597 415 aaKnown RBP3.14□□□□□ -1.91
CLK1-214ENST00000496205 SSTP61278 116 aa3.14□□□□□ -1.91
CLK1-214ENST00000496205 TRA2BP62995 288 aaKnown RBP3.14□□□□□ -1.91
CLK1-214ENST00000496205 HERV-K104P63124 156 aa3.14□□□□□ -1.91
CLK1-214ENST00000496205 MFGE8Q08431 387 aaPredicted RBP3.14□□□□□ -1.91
CLK1-214ENST00000496205 DRP2Q13474 957 aa3.14□□□□□ -1.91
CLK1-214ENST00000496205 GPM6BQ13491 265 aa3.14□□□□□ -1.91
CLK1-214ENST00000496205 HEPACAMQ14CZ8 416 aa3.14□□□□□ -1.91
CLK1-214ENST00000496205 KRT31Q15323 416 aa3.14□□□□□ -1.91
CLK1-214ENST00000496205 TMEM30BQ3MIR4 351 aa3.14□□□□□ -1.91
CLK1-214ENST00000496205 KRTAP13-3Q3SY46 172 aa3.14□□□□□ -1.91
CLK1-214ENST00000496205 FILIP1LQ4L180 1135 aa3.14□□□□□ -1.91
CLK1-214ENST00000496205 FGD3Q5JSP0 725 aa3.14□□□□□ -1.91
CLK1-214ENST00000496205 CAPN13Q6MZZ7 669 aaPredicted RBP3.14□□□□□ -1.91
CLK1-214ENST00000496205 NEPROQ6NW34 567 aa3.14□□□□□ -1.91
CLK1-214ENST00000496205 FIP1L1Q6UN15 594 aaKnown RBP3.14□□□□□ -1.91
CLK1-214ENST00000496205 CD164L2Q6UWJ8 174 aa3.14□□□□□ -1.91
CLK1-214ENST00000496205 WDR88Q6ZMY6 472 aa3.14□□□□□ -1.91
CLK1-214ENST00000496205 CYP4V2Q6ZWL3 525 aaPredicted RBP3.14□□□□□ -1.91
CLK1-214ENST00000496205 SH2D6Q7Z4S9 175 aa3.14□□□□□ -1.91
CLK1-214ENST00000496205 LSMEM2Q8N112 164 aa3.14□□□□□ -1.91
CLK1-214ENST00000496205 CCDC185Q8N715 623 aa3.14□□□□□ -1.91
CLK1-214ENST00000496205 RELL2Q8NC24 303 aaPredicted RBP3.14□□□□□ -1.91
CLK1-214ENST00000496205 LEMD2Q8NC56 503 aa3.14□□□□□ -1.91
CLK1-214ENST00000496205 RPLP0P6Q8NHW5 317 aa3.14□□□□□ -1.91
CLK1-214ENST00000496205 MAPK15Q8TD08 544 aa3.14□□□□□ -1.91
CLK1-214ENST00000496205 ARHGAP45Q92619 1136 aa3.14□□□□□ -1.91
CLK1-214ENST00000496205 C16orf58Q96GQ5 468 aa3.14□□□□□ -1.91
CLK1-214ENST00000496205 PCED1BQ96HM7 432 aa3.14□□□□□ -1.91
CLK1-214ENST00000496205 MAGED4Q96JG8 741 aa3.14□□□□□ -1.91
CLK1-214ENST00000496205 AGPAT1Q99943 283 aa3.14□□□□□ -1.91
CLK1-214ENST00000496205 CARD6Q9BX69 1037 aa3.14□□□□□ -1.91
CLK1-214ENST00000496205 CLEC7AQ9BXN2 247 aa3.14□□□□□ -1.91
CLK1-214ENST00000496205 SIRPDQ9H106 197 aa3.14□□□□□ -1.91
CLK1-214ENST00000496205 FGF22Q9HCT0 170 aa3.14□□□□□ -1.91
CLK1-214ENST00000496205 TM9SF3Q9HD45 589 aa3.14□□□□□ -1.91
CLK1-214ENST00000496205 FARSBQ9NSD9 589 aaKnown RBP3.14□□□□□ -1.91
CLK1-214ENST00000496205 DDX28Q9NUL7 540 aaKnown RBP3.14□□□□□ -1.91
CLK1-214ENST00000496205 NMRK1Q9NWW6 199 aa3.14□□□□□ -1.91
CLK1-214ENST00000496205 SOHLH2Q9NX45 425 aa3.14□□□□□ -1.91
CLK1-214ENST00000496205 ZNF319Q9P2F9 582 aa3.14□□□□□ -1.91
CLK1-214ENST00000496205 NUDCQ9Y266 331 aa3.14□□□□□ -1.91
CLK1-214ENST00000496205 SELENOKQ9Y6D0 94 aa3.14□□□□□ -1.91
CLK1-214ENST00000496205 CSNK1G3Q9Y6M4 447 aa3.14□□□□□ -1.91
CLK1-214ENST00000496205 KDRP35968 1356 aa3.13□□□□□ -1.91
CLK1-214ENST00000496205 IGHV3-20A0A0C4DH32 117 aa3.13□□□□□ -1.91
CLK1-214ENST00000496205 MEX3AA1L020 520 aaKnown RBP3.13□□□□□ -1.91
CLK1-214ENST00000496205 TMEM89A2RUT3 159 aa3.13□□□□□ -1.91
CLK1-214ENST00000496205 FAM25EA8MYX2 175 aa3.13□□□□□ -1.91
CLK1-214ENST00000496205 SGK1O00141 431 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms