RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 TRIM49P0CI25 452 aa4.57□□□□□ -1.68
SSR3-208ENST00000496050 TRIM49CP0CI26 452 aa4.57□□□□□ -1.68
SSR3-208ENST00000496050 CCND2P30279 289 aa4.57□□□□□ -1.68
SSR3-208ENST00000496050 HSPA1LP34931 641 aa4.57□□□□□ -1.68
SSR3-208ENST00000496050 CD86P42081 329 aa4.57□□□□□ -1.68
SSR3-208ENST00000496050 NLRP11P59045 1033 aaKnown RBP4.57□□□□□ -1.68
SSR3-208ENST00000496050 BTG3Q14201 252 aaPredicted RBP4.57□□□□□ -1.68
SSR3-208ENST00000496050 UPP1Q16831 310 aa4.57□□□□□ -1.68
SSR3-208ENST00000496050 IL23RQ5VWK5 629 aa4.57□□□□□ -1.68
SSR3-208ENST00000496050 LIPJQ5W064 366 aa4.57□□□□□ -1.68
SSR3-208ENST00000496050 RAET1GQ6H3X3 334 aa4.57□□□□□ -1.68
SSR3-208ENST00000496050 ADAM5Q6NVV9 412 aa4.57□□□□□ -1.68
SSR3-208ENST00000496050 CWC27Q6UX04 472 aaKnown RBP4.57□□□□□ -1.68
SSR3-208ENST00000496050 Q6ZRG5 221 aa4.57□□□□□ -1.68
SSR3-208ENST00000496050 ASRGL1Q7L266 308 aa4.57□□□□□ -1.68
SSR3-208ENST00000496050 YRDCQ86U90 279 aaKnown RBP4.57□□□□□ -1.68
SSR3-208ENST00000496050 ERC1Q8IUD2 1116 aa4.57□□□□□ -1.68
SSR3-208ENST00000496050 WDR49Q8IV35 697 aa4.57□□□□□ -1.68
SSR3-208ENST00000496050 LINC00518Q8N0U6 118 aa4.57□□□□□ -1.68
SSR3-208ENST00000496050 WDSUB1Q8N9V3 476 aa4.57□□□□□ -1.68
SSR3-208ENST00000496050 ICA1LQ8NDH6 482 aa4.57□□□□□ -1.68
SSR3-208ENST00000496050 PHYHIPQ92561 330 aa4.57□□□□□ -1.68
SSR3-208ENST00000496050 TMEM45BQ96B21 275 aa4.57□□□□□ -1.68
SSR3-208ENST00000496050 LINC00479Q96M42 142 aa4.57□□□□□ -1.68
SSR3-208ENST00000496050 OPRPNQ99935 248 aaPredicted RBP4.57□□□□□ -1.68
SSR3-208ENST00000496050 DCTN5Q9BTE1 182 aa4.57□□□□□ -1.68
SSR3-208ENST00000496050 CXXC4Q9H2H0 198 aa4.57□□□□□ -1.68
SSR3-208ENST00000496050 DCTPP1Q9H773 170 aa4.57□□□□□ -1.68
SSR3-208ENST00000496050 WDR41Q9HAD4 459 aa4.57□□□□□ -1.68
SSR3-208ENST00000496050 IL1RAPQ9NPH3 570 aa4.57□□□□□ -1.68
SSR3-208ENST00000496050 TAS2R3Q9NYW6 316 aa4.57□□□□□ -1.68
SSR3-208ENST00000496050 CLIP2Q9UDT6 1046 aa4.57□□□□□ -1.68
SSR3-208ENST00000496050 PLA2G4CQ9UP65 541 aa4.57□□□□□ -1.68
SSR3-208ENST00000496050 PTPRUQ92729 1446 aa4.56□□□□□ -1.68
SSR3-208ENST00000496050 TSPAN2O60636 221 aa4.56□□□□□ -1.68
SSR3-208ENST00000496050 TRIM16O95361 564 aa4.56□□□□□ -1.68
SSR3-208ENST00000496050 FCER2P06734 321 aa4.56□□□□□ -1.68
SSR3-208ENST00000496050 ADORA3P0DMS8 318 aa4.56□□□□□ -1.68
SSR3-208ENST00000496050 RALAP11233 206 aa4.56□□□□□ -1.68
SSR3-208ENST00000496050 DNAJB1P25685 340 aa4.56□□□□□ -1.68
SSR3-208ENST00000496050 AKT2P31751 481 aa4.56□□□□□ -1.68
SSR3-208ENST00000496050 ID1P41134 155 aa4.56□□□□□ -1.68
SSR3-208ENST00000496050 SLC26A5P58743 744 aa4.56□□□□□ -1.68
SSR3-208ENST00000496050 RPL27P61353 136 aaKnown RBP4.56□□□□□ -1.68
SSR3-208ENST00000496050 HTD2P86397 168 aa4.56□□□□□ -1.68
SSR3-208ENST00000496050 CALCOCO2Q13137 446 aa4.56□□□□□ -1.68
SSR3-208ENST00000496050 SLC17A1Q14916 467 aa4.56□□□□□ -1.68
SSR3-208ENST00000496050 KARSQ15046 597 aaKnown RBP4.56□□□□□ -1.68
SSR3-208ENST00000496050 ECSCRQ19T08 205 aa4.56□□□□□ -1.68
SSR3-208ENST00000496050 KNOP1Q1ED39 458 aaKnown RBP4.56□□□□□ -1.68
SSR3-208ENST00000496050 SHROOM1Q2M3G4 852 aaPredicted RBP4.56□□□□□ -1.68
SSR3-208ENST00000496050 MS4A18Q3C1V0 323 aa4.56□□□□□ -1.68
SSR3-208ENST00000496050 NEPROQ6NW34 567 aa4.56□□□□□ -1.68
SSR3-208ENST00000496050 IRGCQ6NXR0 463 aa4.56□□□□□ -1.68
SSR3-208ENST00000496050 FAM159AQ6UWV7 190 aa4.56□□□□□ -1.68
SSR3-208ENST00000496050 TMEM26Q6ZUK4 368 aa4.56□□□□□ -1.68
SSR3-208ENST00000496050 CATSPER4Q7RTX7 472 aa4.56□□□□□ -1.68
SSR3-208ENST00000496050 ADGRD2Q7Z7M1 963 aa4.56□□□□□ -1.68
SSR3-208ENST00000496050 ITIH5Q86UX2 942 aa4.56□□□□□ -1.68
SSR3-208ENST00000496050 RNF148Q8N7C7 305 aa4.56□□□□□ -1.68
SSR3-208ENST00000496050 FAM71CQ8NEG0 241 aa4.56□□□□□ -1.68
SSR3-208ENST00000496050 RDH11Q8TC12 318 aa4.56□□□□□ -1.68
SSR3-208ENST00000496050 FBXO25Q8TCJ0 367 aa4.56□□□□□ -1.68
SSR3-208ENST00000496050 TMEM37Q8WXS4 190 aa4.56□□□□□ -1.68
SSR3-208ENST00000496050 P3H4Q92791 437 aa4.56□□□□□ -1.68
SSR3-208ENST00000496050 MRPL38Q96DV4 380 aaKnown RBP4.56□□□□□ -1.68
SSR3-208ENST00000496050 COG3Q96JB2 828 aa4.56□□□□□ -1.68
SSR3-208ENST00000496050 POM121L2Q96KW2 1035 aa4.56□□□□□ -1.68
SSR3-208ENST00000496050 TNFRSF13CQ96RJ3 184 aa4.56□□□□□ -1.68
SSR3-208ENST00000496050 KRTAP1-5Q9BYS1 174 aa4.56□□□□□ -1.68
SSR3-208ENST00000496050 NMNAT2Q9BZQ4 307 aa4.56□□□□□ -1.68
SSR3-208ENST00000496050 PARLQ9H300 379 aa4.56□□□□□ -1.68
SSR3-208ENST00000496050 FAM124BQ9H5Z6 455 aaPredicted RBP4.56□□□□□ -1.68
SSR3-208ENST00000496050 TMEM231Q9H6L2 316 aa4.56□□□□□ -1.68
SSR3-208ENST00000496050 NGBQ9NPG2 151 aa4.56□□□□□ -1.68
SSR3-208ENST00000496050 LHX3Q9UBR4 397 aa4.56□□□□□ -1.68
SSR3-208ENST00000496050 NIP7Q9Y221 180 aaKnown RBP eCLIP4.56□□□□□ -1.68
SSR3-208ENST00000496050 NPC1L1Q9UHC9 1359 aa4.55□□□□□ -1.68
SSR3-208ENST00000496050 IGHV3-38A0A0C4DH36 116 aa4.55□□□□□ -1.68
SSR3-208ENST00000496050 TMEM89A2RUT3 159 aa4.55□□□□□ -1.68
SSR3-208ENST00000496050 G3V2L1 256 aa4.55□□□□□ -1.68
SSR3-208ENST00000496050 FBP2O00757 339 aa4.55□□□□□ -1.68
SSR3-208ENST00000496050 IDH3BO43837 385 aa4.55□□□□□ -1.68
SSR3-208ENST00000496050 ZG16O60844 167 aa4.55□□□□□ -1.68
SSR3-208ENST00000496050 GSTA1P08263 222 aa4.55□□□□□ -1.68
SSR3-208ENST00000496050 CD1DP15813 335 aa4.55□□□□□ -1.68
SSR3-208ENST00000496050 DESP17661 470 aa4.55□□□□□ -1.68
SSR3-208ENST00000496050 UGT1A4P22310 534 aa4.55□□□□□ -1.68
SSR3-208ENST00000496050 TMOD1P28289 359 aa4.55□□□□□ -1.68
SSR3-208ENST00000496050 CHRNA3P32297 505 aa4.55□□□□□ -1.68
SSR3-208ENST00000496050 MTIF2P46199 727 aaKnown RBP4.55□□□□□ -1.68
SSR3-208ENST00000496050 SLC6A8P48029 635 aa4.55□□□□□ -1.68
SSR3-208ENST00000496050 PEX3P56589 373 aa4.55□□□□□ -1.68
SSR3-208ENST00000496050 MYBPC1Q00872 1141 aa4.55□□□□□ -1.68
SSR3-208ENST00000496050 SNX1Q13596 522 aa4.55□□□□□ -1.68
SSR3-208ENST00000496050 DPYSQ14117 519 aa4.55□□□□□ -1.68
SSR3-208ENST00000496050 FASTKQ14296 549 aaKnown RBP4.55□□□□□ -1.68
SSR3-208ENST00000496050 CLPPQ16740 277 aaPredicted RBP4.55□□□□□ -1.68
SSR3-208ENST00000496050 OTUD3Q5T2D3 398 aaPredicted RBP4.55□□□□□ -1.68
SSR3-208ENST00000496050 ISLR2Q6UXK2 745 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms