RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 DUSP11O75319 330 aaKnown RBP3.91□□□□□ -1.78
NCKAP1-208ENST00000495619 CSDE1O75534 798 aaKnown RBP3.91□□□□□ -1.78
NCKAP1-208ENST00000495619 VENTXO95231 258 aa3.91□□□□□ -1.78
NCKAP1-208ENST00000495619 CALCAP01258 141 aa3.91□□□□□ -1.78
NCKAP1-208ENST00000495619 FCGR3AP08637 254 aa3.91□□□□□ -1.78
NCKAP1-208ENST00000495619 ODC1P11926 461 aa3.91□□□□□ -1.78
NCKAP1-208ENST00000495619 CPA3P15088 417 aa3.91□□□□□ -1.78
NCKAP1-208ENST00000495619 EZRP15311 586 aaKnown RBP3.91□□□□□ -1.78
NCKAP1-208ENST00000495619 CTNNA1P35221 906 aaKnown RBP3.91□□□□□ -1.78
NCKAP1-208ENST00000495619 FNTAP49354 379 aa3.91□□□□□ -1.78
NCKAP1-208ENST00000495619 GABPAQ06546 454 aa3.91□□□□□ -1.78
NCKAP1-208ENST00000495619 SLC17A1Q14916 467 aa3.91□□□□□ -1.78
NCKAP1-208ENST00000495619 CCDC158Q5M9N0 1113 aa3.91□□□□□ -1.78
NCKAP1-208ENST00000495619 SIGLEC15Q6ZMC9 328 aa3.91□□□□□ -1.78
NCKAP1-208ENST00000495619 CLYBLQ8N0X4 340 aa3.91□□□□□ -1.78
NCKAP1-208ENST00000495619 THEM5Q8N1Q8 247 aa3.91□□□□□ -1.78
NCKAP1-208ENST00000495619 Q8N7P7 452 aa3.91□□□□□ -1.78
NCKAP1-208ENST00000495619 PRCCQ92733 491 aaPredicted RBP3.91□□□□□ -1.78
NCKAP1-208ENST00000495619 ATP6V1E2Q96A05 226 aa3.91□□□□□ -1.78
NCKAP1-208ENST00000495619 AMBNQ9NP70 447 aa3.91□□□□□ -1.78
NCKAP1-208ENST00000495619 ABCB8Q9NUT2 735 aa3.91□□□□□ -1.78
NCKAP1-208ENST00000495619 ARMCX1Q9P291 453 aa3.91□□□□□ -1.78
NCKAP1-208ENST00000495619 EIF3KQ9UBQ5 218 aaKnown RBP3.91□□□□□ -1.78
NCKAP1-208ENST00000495619 ZNF256Q9Y2P7 627 aaPredicted RBP3.91□□□□□ -1.78
NCKAP1-208ENST00000495619 ATP6AP2A0A1C7CYW4 349 aa3.9□□□□□ -1.79
NCKAP1-208ENST00000495619 ZSCAN5CA6NGD5 496 aaPredicted RBP3.9□□□□□ -1.79
NCKAP1-208ENST00000495619 E2F3O00716 465 aa3.9□□□□□ -1.79
NCKAP1-208ENST00000495619 CHUKO15111 745 aa3.9□□□□□ -1.79
NCKAP1-208ENST00000495619 CSO75390 466 aaKnown RBP3.9□□□□□ -1.79
NCKAP1-208ENST00000495619 GAS8O95995 478 aa3.9□□□□□ -1.79
NCKAP1-208ENST00000495619 MMP10P09238 476 aa3.9□□□□□ -1.79
NCKAP1-208ENST00000495619 GJB2P29033 226 aa3.9□□□□□ -1.79
NCKAP1-208ENST00000495619 IST1P53990 364 aa3.9□□□□□ -1.79
NCKAP1-208ENST00000495619 STX1BP61266 288 aa3.9□□□□□ -1.79
NCKAP1-208ENST00000495619 IGLV3-21P80748 117 aaPredicted RBP3.9□□□□□ -1.79
NCKAP1-208ENST00000495619 SLMAPQ14BN4 828 aa3.9□□□□□ -1.79
NCKAP1-208ENST00000495619 SPHARQ15513 63 aa3.9□□□□□ -1.79
NCKAP1-208ENST00000495619 LCE3EQ5T5B0 92 aa3.9□□□□□ -1.79
NCKAP1-208ENST00000495619 CCDC71Q8IV32 467 aaPredicted RBP3.9□□□□□ -1.79
NCKAP1-208ENST00000495619 SYCP3Q8IZU3 236 aa3.9□□□□□ -1.79
NCKAP1-208ENST00000495619 TMCO5AQ8N6Q1 288 aa3.9□□□□□ -1.79
NCKAP1-208ENST00000495619 ZNRF1Q8ND25 227 aa3.9□□□□□ -1.79
NCKAP1-208ENST00000495619 PTP4A1Q93096 173 aa3.9□□□□□ -1.79
NCKAP1-208ENST00000495619 PPP1R16AQ96I34 528 aa3.9□□□□□ -1.79
NCKAP1-208ENST00000495619 MCCC1Q96RQ3 725 aaPredicted RBP3.9□□□□□ -1.79
NCKAP1-208ENST00000495619 RAB40CQ96S21 281 aa3.9□□□□□ -1.79
NCKAP1-208ENST00000495619 CNIH4Q9P003 139 aa3.9□□□□□ -1.79
NCKAP1-208ENST00000495619 CIDEBQ9UHD4 219 aa3.9□□□□□ -1.79
NCKAP1-208ENST00000495619 OR1A2Q9Y585 309 aa3.9□□□□□ -1.79
NCKAP1-208ENST00000495619 C13orf42A0A1B0GVH6 325 aa3.89□□□□□ -1.79
NCKAP1-208ENST00000495619 H0YIG0 161 aa3.89□□□□□ -1.79
NCKAP1-208ENST00000495619 ZNF263O14978 683 aa3.89□□□□□ -1.79
NCKAP1-208ENST00000495619 FMO6PO60774 539 aa3.89□□□□□ -1.79
NCKAP1-208ENST00000495619 ZNF253O75346 499 aa3.89□□□□□ -1.79
NCKAP1-208ENST00000495619 ATP6V1B1P15313 513 aa3.89□□□□□ -1.79
NCKAP1-208ENST00000495619 MFGE8Q08431 387 aaPredicted RBP3.89□□□□□ -1.79
NCKAP1-208ENST00000495619 MEF2DQ14814 521 aa3.89□□□□□ -1.79
NCKAP1-208ENST00000495619 FUT11Q495W5 492 aa3.89□□□□□ -1.79
NCKAP1-208ENST00000495619 GLRA4Q5JXX5 417 aa3.89□□□□□ -1.79
NCKAP1-208ENST00000495619 IYDQ6PHW0 289 aa3.89□□□□□ -1.79
NCKAP1-208ENST00000495619 AQP12AQ8IXF9 295 aa3.89□□□□□ -1.79
NCKAP1-208ENST00000495619 SLC22A18ASQ8N1D0 253 aa3.89□□□□□ -1.79
NCKAP1-208ENST00000495619 OR1K1Q8NGR3 316 aa3.89□□□□□ -1.79
NCKAP1-208ENST00000495619 MRPL24Q96A35 216 aaKnown RBP3.89□□□□□ -1.79
NCKAP1-208ENST00000495619 GUCD1Q96NT3 240 aa3.89□□□□□ -1.79
NCKAP1-208ENST00000495619 SSX3Q99909 188 aa3.89□□□□□ -1.79
NCKAP1-208ENST00000495619 SPAG8Q99932 426 aaPredicted RBP3.89□□□□□ -1.79
NCKAP1-208ENST00000495619 ZNF559Q9BR84 538 aa3.89□□□□□ -1.79
NCKAP1-208ENST00000495619 ALDH8A1Q9H2A2 487 aaPredicted RBP3.89□□□□□ -1.79
NCKAP1-208ENST00000495619 IL1RAPL2Q9NP60 686 aa3.89□□□□□ -1.79
NCKAP1-208ENST00000495619 SEC14L4Q9UDX3 406 aa3.89□□□□□ -1.79
NCKAP1-208ENST00000495619 ZNF646O15015 1829 aaPredicted RBP3.88□□□□□ -1.79
NCKAP1-208ENST00000495619 ATRXP46100 2492 aa3.88□□□□□ -1.79
NCKAP1-208ENST00000495619 ANXA9O76027 345 aa3.88□□□□□ -1.79
NCKAP1-208ENST00000495619 GLCEO94923 617 aa3.88□□□□□ -1.79
NCKAP1-208ENST00000495619 SNRPCP09234 159 aaKnown RBP3.88□□□□□ -1.79
NCKAP1-208ENST00000495619 FOSL2P15408 326 aa3.88□□□□□ -1.79
NCKAP1-208ENST00000495619 VCLP18206 1134 aa3.88□□□□□ -1.79
NCKAP1-208ENST00000495619 MAGEB1P43366 347 aa3.88□□□□□ -1.79
NCKAP1-208ENST00000495619 RPL27P61353 136 aaKnown RBP3.88□□□□□ -1.79
NCKAP1-208ENST00000495619 RPS6KA1Q15418 735 aa3.88□□□□□ -1.79
NCKAP1-208ENST00000495619 ANKRD55Q3KP44 614 aa3.88□□□□□ -1.79
NCKAP1-208ENST00000495619 ODF2Q5BJF6 829 aa3.88□□□□□ -1.79
NCKAP1-208ENST00000495619 PARP8Q8N3A8 854 aa3.88□□□□□ -1.79
NCKAP1-208ENST00000495619 FBXO25Q8TCJ0 367 aa3.88□□□□□ -1.79
NCKAP1-208ENST00000495619 GGHQ92820 318 aa3.88□□□□□ -1.79
NCKAP1-208ENST00000495619 PCED1BQ96HM7 432 aa3.88□□□□□ -1.79
NCKAP1-208ENST00000495619 ZIM3Q96PE6 472 aa3.88□□□□□ -1.79
NCKAP1-208ENST00000495619 S1PR3Q99500 378 aa3.88□□□□□ -1.79
NCKAP1-208ENST00000495619 YTHDF1Q9BYJ9 559 aaKnown RBP3.88□□□□□ -1.79
NCKAP1-208ENST00000495619 ACPTQ9BZG2 426 aa3.88□□□□□ -1.79
NCKAP1-208ENST00000495619 WWP1Q9H0M0 922 aa3.88□□□□□ -1.79
NCKAP1-208ENST00000495619 ZDHHC6Q9H6R6 413 aa3.88□□□□□ -1.79
NCKAP1-208ENST00000495619 A0A1W2PQ72 361 aa3.87□□□□□ -1.79
NCKAP1-208ENST00000495619 P4HA1P13674 534 aa3.87□□□□□ -1.79
NCKAP1-208ENST00000495619 GLRA1P23415 457 aa3.87□□□□□ -1.79
NCKAP1-208ENST00000495619 DRD3P35462 400 aa3.87□□□□□ -1.79
NCKAP1-208ENST00000495619 KCNK10P57789 538 aa3.87□□□□□ -1.79
NCKAP1-208ENST00000495619 CDKL1Q00532 357 aa3.87□□□□□ -1.79
NCKAP1-208ENST00000495619 MORF4L2Q15014 288 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms