RNA–Protein interactions for RNA: ENST00000495425.6

SLC47A1-204, Transcript of solute carrier family 47 member 1, humanhuman

TSL 2

Gene SLC47A1, Length 1,066 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1-204ENST00000495425 MRPS33Q9Y291 106 aaKnown RBP12.37□□□□□ -0.43
SLC47A1-204ENST00000495425 MBD3L4A6NDZ8 208 aaPredicted RBP12.36□□□□□ -0.43
SLC47A1-204ENST00000495425 MBD3L3A6NE82 208 aaPredicted RBP12.36□□□□□ -0.43
SLC47A1-204ENST00000495425 MBD3L5A6NJ08 208 aaPredicted RBP12.36□□□□□ -0.43
SLC47A1-204ENST00000495425 LRRC3CA6NJW4 275 aa12.36□□□□□ -0.43
SLC47A1-204ENST00000495425 FAM159BA6NKW6 160 aa12.36□□□□□ -0.43
SLC47A1-204ENST00000495425 C4orf51C9J302 202 aa12.36□□□□□ -0.43
SLC47A1-204ENST00000495425 ATP8B1O43520 1251 aa12.36□□□□□ -0.43
SLC47A1-204ENST00000495425 ZNF354AO60765 605 aaPredicted RBP12.36□□□□□ -0.43
SLC47A1-204ENST00000495425 SERPINA6P08185 405 aa12.36□□□□□ -0.43
SLC47A1-204ENST00000495425 CTSSP25774 331 aa12.36□□□□□ -0.43
SLC47A1-204ENST00000495425 RAB38P57729 211 aa12.36□□□□□ -0.43
SLC47A1-204ENST00000495425 IL2P60568 153 aa12.36□□□□□ -0.43
SLC47A1-204ENST00000495425 CRYZQ08257 329 aaKnown RBP12.36□□□□□ -0.43
SLC47A1-204ENST00000495425 BMPR2Q13873 1038 aa12.36□□□□□ -0.43
SLC47A1-204ENST00000495425 MPEG1Q2M385 716 aa12.36□□□□□ -0.43
SLC47A1-204ENST00000495425 CYS1Q717R9 158 aa12.36□□□□□ -0.43
SLC47A1-204ENST00000495425 LIX1Q8N485 282 aa12.36□□□□□ -0.43
SLC47A1-204ENST00000495425 ANKRD53Q8N9V6 530 aa12.36□□□□□ -0.43
SLC47A1-204ENST00000495425 OR5L2Q8NGL0 311 aa12.36□□□□□ -0.43
SLC47A1-204ENST00000495425 MBD3L2Q8NHZ7 208 aaPredicted RBP12.36□□□□□ -0.43
SLC47A1-204ENST00000495425 PAQR8Q8TEZ7 354 aa12.36□□□□□ -0.43
SLC47A1-204ENST00000495425 ANKRD49Q8WVL7 239 aa12.36□□□□□ -0.43
SLC47A1-204ENST00000495425 ALKBH8Q96BT7 664 aaKnown RBP12.36□□□□□ -0.43
SLC47A1-204ENST00000495425 VPS39Q96JC1 886 aa12.36□□□□□ -0.43
SLC47A1-204ENST00000495425 OR4K3Q96R72 315 aa12.36□□□□□ -0.43
SLC47A1-204ENST00000495425 PRDM14Q9GZV8 571 aa12.36□□□□□ -0.43
SLC47A1-204ENST00000495425 RHOJQ9H4E5 214 aa12.36□□□□□ -0.43
SLC47A1-204ENST00000495425 CAB39LQ9H9S4 337 aa12.36□□□□□ -0.43
SLC47A1-204ENST00000495425 CLCA3PQ9Y6N3 262 aa12.36□□□□□ -0.43
SLC47A1-204ENST00000495425 CUBNO60494 3623 aa12.36□□□□□ -0.43
SLC47A1-204ENST00000495425 RAI1Q7Z5J4 1906 aaPredicted RBP12.35□□□□□ -0.43
SLC47A1-204ENST00000495425 SH3D21A4FU49 640 aa12.35□□□□□ -0.43
SLC47A1-204ENST00000495425 TRIM64A6NGJ6 449 aa12.35□□□□□ -0.43
SLC47A1-204ENST00000495425 TRIM64BA6NI03 449 aa12.35□□□□□ -0.43
SLC47A1-204ENST00000495425 CD8B2A6NJW9 211 aa12.35□□□□□ -0.43
SLC47A1-204ENST00000495425 RNF212BA8MTL3 300 aa12.35□□□□□ -0.43
SLC47A1-204ENST00000495425 KDM4EB2RXH2 506 aaPredicted RBP12.35□□□□□ -0.43
SLC47A1-204ENST00000495425 EEF1E1-BLOC1S5C9J1V9 151 aa12.35□□□□□ -0.43
SLC47A1-204ENST00000495425 CDC7O00311 574 aa12.35□□□□□ -0.43
SLC47A1-204ENST00000495425 EEF1E1O43324 174 aaKnown RBP12.35□□□□□ -0.43
SLC47A1-204ENST00000495425 RRP9O43818 475 aaKnown RBP12.35□□□□□ -0.43
SLC47A1-204ENST00000495425 RHOXF2BP0C7M4 288 aa12.35□□□□□ -0.43
SLC47A1-204ENST00000495425 RFPL3SP0C7P2 107 aa12.35□□□□□ -0.43
SLC47A1-204ENST00000495425 ZNF37AP17032 561 aaPredicted RBP12.35□□□□□ -0.43
SLC47A1-204ENST00000495425 PIGAP37287 484 aa12.35□□□□□ -0.43
SLC47A1-204ENST00000495425 AP1S2P56377 157 aa12.35□□□□□ -0.43
SLC47A1-204ENST00000495425 RNF4P78317 190 aa12.35□□□□□ -0.43
SLC47A1-204ENST00000495425 SLC13A2Q13183 592 aa12.35□□□□□ -0.43
SLC47A1-204ENST00000495425 ZNF791Q3KP31 576 aaPredicted RBP12.35□□□□□ -0.43
SLC47A1-204ENST00000495425 KBTBD12Q3ZCT8 623 aa12.35□□□□□ -0.43
SLC47A1-204ENST00000495425 SLC22A10Q63ZE4 541 aa12.35□□□□□ -0.43
SLC47A1-204ENST00000495425 PHC2Q8IXK0 858 aa12.35□□□□□ -0.43
SLC47A1-204ENST00000495425 DND1Q8IYX4 353 aaKnown RBP12.35□□□□□ -0.43
SLC47A1-204ENST00000495425 TMEM52Q8NDY8 209 aa12.35□□□□□ -0.43
SLC47A1-204ENST00000495425 FBF1Q8TES7 1133 aa12.35□□□□□ -0.43
SLC47A1-204ENST00000495425 SLC5A11Q8WWX8 675 aa12.35□□□□□ -0.43
SLC47A1-204ENST00000495425 NEIL2Q969S2 332 aa12.35□□□□□ -0.43
SLC47A1-204ENST00000495425 GAL3ST3Q96A11 431 aa12.35□□□□□ -0.43
SLC47A1-204ENST00000495425 PDLIM5Q96HC4 596 aaKnown RBP12.35□□□□□ -0.43
SLC47A1-204ENST00000495425 RHOXF2Q9BQY4 288 aa12.35□□□□□ -0.43
SLC47A1-204ENST00000495425 PHACTR1Q9C0D0 580 aa12.35□□□□□ -0.43
SLC47A1-204ENST00000495425 PELI2Q9HAT8 420 aa12.35□□□□□ -0.43
SLC47A1-204ENST00000495425 NSMCE4AQ9NXX6 385 aa12.35□□□□□ -0.43
SLC47A1-204ENST00000495425 EIF3LQ9Y262 564 aaKnown RBP12.35□□□□□ -0.43
SLC47A1-204ENST00000495425 NBEAL1Q6ZS30 2694 aa12.35□□□□□ -0.43
SLC47A1-204ENST00000495425 KIAA1549Q9HCM3 1950 aa12.34□□□□□ -0.43
SLC47A1-204ENST00000495425 DOCK7Q96N67 2140 aa12.34□□□□□ -0.43
SLC47A1-204ENST00000495425 ARID1AO14497 2285 aa12.34□□□□□ -0.43
SLC47A1-204ENST00000495425 WISP3O95389 354 aaPredicted RBP12.34□□□□□ -0.43
SLC47A1-204ENST00000495425 GSTA2P09210 222 aa12.34□□□□□ -0.43
SLC47A1-204ENST00000495425 HIST1H2AGP0C0S8 130 aaPredicted RBP12.34□□□□□ -0.43
SLC47A1-204ENST00000495425 HIST1H2ADP20671 130 aa12.34□□□□□ -0.43
SLC47A1-204ENST00000495425 FPR1P21462 350 aa12.34□□□□□ -0.43
SLC47A1-204ENST00000495425 GMPRP36959 345 aa12.34□□□□□ -0.43
SLC47A1-204ENST00000495425 HNF4AP41235 474 aa12.34□□□□□ -0.43
SLC47A1-204ENST00000495425 HNRNPFP52597 415 aaKnown RBP12.34□□□□□ -0.43
SLC47A1-204ENST00000495425 WNT3P56703 355 aa12.34□□□□□ -0.43
SLC47A1-204ENST00000495425 STXBP1P61764 594 aaKnown RBP12.34□□□□□ -0.43
SLC47A1-204ENST00000495425 KCNJ2P63252 427 aa12.34□□□□□ -0.43
SLC47A1-204ENST00000495425 CSHL1Q14406 222 aa12.34□□□□□ -0.43
SLC47A1-204ENST00000495425 EFTUD2Q15029 972 aaKnown RBP eCLIP12.34□□□□□ -0.439e-7■■■■□ 23.5
SLC47A1-204ENST00000495425 TOR1AIP1Q5JTV8 583 aa12.34□□□□□ -0.43
SLC47A1-204ENST00000495425 SBSNQ6UWP8 590 aa12.34□□□□□ -0.43
SLC47A1-204ENST00000495425 SPATA6LQ8N4H0 392 aa12.34□□□□□ -0.43
SLC47A1-204ENST00000495425 PPM1NQ8N819 430 aa12.34□□□□□ -0.43
SLC47A1-204ENST00000495425 NUBPLQ8TB37 319 aa12.34□□□□□ -0.43
SLC47A1-204ENST00000495425 PTPMT1Q8WUK0 201 aaPredicted RBP12.34□□□□□ -0.43
SLC47A1-204ENST00000495425 CDKL2Q92772 493 aa12.34□□□□□ -0.43
SLC47A1-204ENST00000495425 PYCR2Q96C36 320 aa12.34□□□□□ -0.43
SLC47A1-204ENST00000495425 HIST1H2AHQ96KK5 128 aa12.34□□□□□ -0.43
SLC47A1-204ENST00000495425 RBBP8Q99708 897 aa12.34□□□□□ -0.43
SLC47A1-204ENST00000495425 TIMP4Q99727 224 aa12.34□□□□□ -0.43
SLC47A1-204ENST00000495425 CPNE1Q99829 537 aa12.34□□□□□ -0.43
SLC47A1-204ENST00000495425 HIST1H2AJQ99878 128 aa12.34□□□□□ -0.43
SLC47A1-204ENST00000495425 AIF1LQ9BQI0 150 aa12.34□□□□□ -0.43
SLC47A1-204ENST00000495425 H2AFJQ9BTM1 129 aa12.34□□□□□ -0.43
SLC47A1-204ENST00000495425 AICDAQ9GZX7 198 aa12.34□□□□□ -0.43
SLC47A1-204ENST00000495425 KLHL31Q9H511 634 aa12.34□□□□□ -0.43
SLC47A1-204ENST00000495425 VTI1BQ9UEU0 232 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms