RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 ARRDC3Q96B67 414 aa12.79□□□□□ -0.36
GPC1-209ENST00000495100 SLC35G5Q96KT7 338 aa12.79□□□□□ -0.36
GPC1-209ENST00000495100 LRRC3BQ96PB8 259 aa12.79□□□□□ -0.36
GPC1-209ENST00000495100 NEURL2Q9BR09 285 aa12.79□□□□□ -0.36
GPC1-209ENST00000495100 RDH14Q9HBH5 336 aa12.79□□□□□ -0.36
GPC1-209ENST00000495100 GTF2A1LQ9UNN4 478 aa12.79□□□□□ -0.36
GPC1-209ENST00000495100 TNFRSF21O75509 655 aa12.79□□□□□ -0.36
GPC1-209ENST00000495100 FGBP02675 491 aa12.79□□□□□ -0.36
GPC1-209ENST00000495100 PRNPP04156 253 aa12.79□□□□□ -0.36
GPC1-209ENST00000495100 SLC6A12P48065 614 aa12.79□□□□□ -0.36
GPC1-209ENST00000495100 RGS8P57771 180 aaPredicted RBP12.79□□□□□ -0.36
GPC1-209ENST00000495100 DEFB134Q4QY38 66 aa12.79□□□□□ -0.36
GPC1-209ENST00000495100 GRHL2Q6ISB3 625 aa12.79□□□□□ -0.36
GPC1-209ENST00000495100 KRT73Q86Y46 540 aa12.79□□□□□ -0.36
GPC1-209ENST00000495100 TRAM1L1Q8N609 369 aa12.79□□□□□ -0.36
GPC1-209ENST00000495100 TESCQ96BS2 214 aa12.79□□□□□ -0.36
GPC1-209ENST00000495100 TIFAQ96CG3 184 aa12.79□□□□□ -0.36
GPC1-209ENST00000495100 ZG16BQ96DA0 208 aa12.79□□□□□ -0.36
GPC1-209ENST00000495100 LMLNQ96KR4 655 aa12.79□□□□□ -0.36
GPC1-209ENST00000495100 PIP5K1AQ99755 562 aa12.79□□□□□ -0.36
GPC1-209ENST00000495100 EFCAB11Q9BUY7 163 aa12.79□□□□□ -0.36
GPC1-209ENST00000495100 UCK2Q9BZX2 261 aa12.79□□□□□ -0.36
GPC1-209ENST00000495100 CSNK1G3Q9Y6M4 447 aa12.79□□□□□ -0.36
GPC1-209ENST00000495100 CD8B2A6NJW9 211 aa12.79□□□□□ -0.36
GPC1-209ENST00000495100 CCNYL3P0C7X3 344 aa12.79□□□□□ -0.36
GPC1-209ENST00000495100 C7P10643 843 aa12.79□□□□□ -0.36
GPC1-209ENST00000495100 CD8BP10966 210 aa12.79□□□□□ -0.36
GPC1-209ENST00000495100 GPX2P18283 190 aa12.79□□□□□ -0.36
GPC1-209ENST00000495100 CD72P21854 359 aa12.79□□□□□ -0.36
GPC1-209ENST00000495100 CSTF2P33240 577 aaKnown RBP eCLIP12.79□□□□□ -0.36
GPC1-209ENST00000495100 CRISP1P54107 249 aa12.79□□□□□ -0.36
GPC1-209ENST00000495100 CSNK2BP67870 215 aa12.79□□□□□ -0.36
GPC1-209ENST00000495100 IL18Q14116 193 aa12.79□□□□□ -0.36
GPC1-209ENST00000495100 LTB4RQ15722 352 aa12.79□□□□□ -0.36
GPC1-209ENST00000495100 ODF4Q2M2E3 257 aa12.79□□□□□ -0.36
GPC1-209ENST00000495100 PRSS48Q7RTY5 328 aa12.79□□□□□ -0.36
GPC1-209ENST00000495100 OR6Q1Q8NGQ2 317 aa12.79□□□□□ -0.36
GPC1-209ENST00000495100 FAM46AQ96IP4 442 aaKnown RBP12.79□□□□□ -0.36
GPC1-209ENST00000495100 CCDC115Q96NT0 180 aa12.79□□□□□ -0.36
GPC1-209ENST00000495100 MVB12BQ9H7P6 319 aa12.79□□□□□ -0.36
GPC1-209ENST00000495100 WSB2Q9NYS7 404 aaPredicted RBP12.79□□□□□ -0.36
GPC1-209ENST00000495100 PTGFRNQ9P2B2 879 aa12.79□□□□□ -0.36
GPC1-209ENST00000495100 SSR3Q9UNL2 185 aa12.79□□□□□ -0.36
GPC1-209ENST00000495100 LOC285556D6RIA3 1793 aa12.79□□□□□ -0.36
GPC1-209ENST00000495100 PSMD9O00233 223 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 RASGRP1O95267 797 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 NTSP30990 170 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 IFNA8P32881 189 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 SLC9A3P48764 834 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 ITGA1P56199 1179 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 SNRPD2P62316 118 aaKnown RBP12.78□□□□□ -0.36
GPC1-209ENST00000495100 RAE1P78406 368 aaKnown RBP12.78□□□□□ -0.36
GPC1-209ENST00000495100 MICAQ29983 383 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 LRRC26Q2I0M4 334 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 ZNF783Q6ZMS7 281 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 Q6ZNB5 142 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 LAX1Q8IWV1 398 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 CPA6Q8N4T0 437 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 PARP16Q8N5Y8 322 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 L3MBTL4Q8NA19 623 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 ENKURQ8TC29 256 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 NEDD4LQ96PU5 975 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 DPH7Q9BTV6 452 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 KLHL31Q9H511 634 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 POFUT2Q9Y2G5 429 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 ZNF510Q9Y2H8 683 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 NEUROG3Q9Y4Z2 214 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 GPC6Q9Y625 555 aaPredicted RBP12.78□□□□□ -0.36
GPC1-209ENST00000495100 ASXL3Q9C0F0 2248 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 NCOR1O75376 2440 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 ZC3H12DA2A288 527 aaKnown RBP12.78□□□□□ -0.36
GPC1-209ENST00000495100 OR2W5A6NFC9 320 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 NARSO43776 548 aaKnown RBP12.78□□□□□ -0.36
GPC1-209ENST00000495100 SERPINB7O75635 380 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 GYPBP06028 91 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 GKN3PP0CG01 181 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 GSTT2P0CG29 244 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 GSTT2BP0CG30 244 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 SAGP10523 405 aaPredicted RBP12.78□□□□□ -0.36
GPC1-209ENST00000495100 ADRB3P13945 408 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 FUT1P19526 365 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 CERS1P27544 350 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 SLC15A1P46059 708 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 RGS6P49758 472 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 OR2B6P58173 313 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 SLAMF1Q13291 335 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 ZNF234Q14588 700 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 C6orf132Q5T0Z8 1188 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 NDUFAF5Q5TEU4 345 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 FAM46CQ5VWP2 391 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 C18orf63Q68DL7 685 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 GLCCI1Q86VQ1 547 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 LACC1Q8IV20 430 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 CBARPQ8N350 705 aaPredicted RBP12.78□□□□□ -0.36
GPC1-209ENST00000495100 CYB561A3Q8NBI2 242 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 ZFPM2Q8WW38 1151 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 DEPDC7Q96QD5 511 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 ZNF607Q96SK3 696 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 GIMAP4Q9NUV9 329 aa12.78□□□□□ -0.36
GPC1-209ENST00000495100 AHCTF1Q8WYP5 2266 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms