RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 ALDH6A1Q02252 535 aaKnown RBP16.4■□□□□ 0.22
HDAC4-211ENST00000494800 RBPJQ06330 500 aa16.4■□□□□ 0.22
HDAC4-211ENST00000494800 ASPHQ12797 758 aa16.4■□□□□ 0.22
HDAC4-211ENST00000494800 NDUFAF5Q5TEU4 345 aa16.4■□□□□ 0.22
HDAC4-211ENST00000494800 ZNF468Q5VIY5 522 aaPredicted RBP16.4■□□□□ 0.22
HDAC4-211ENST00000494800 GFRALQ6UXV0 394 aa16.4■□□□□ 0.22
HDAC4-211ENST00000494800 C4orf33Q8N1A6 199 aa16.4■□□□□ 0.22
HDAC4-211ENST00000494800 OR4K14Q8NGD5 310 aa16.4■□□□□ 0.22
HDAC4-211ENST00000494800 AENQ8WTP8 325 aaKnown RBP16.4■□□□□ 0.22
HDAC4-211ENST00000494800 CAVIN3Q969G5 261 aa16.4■□□□□ 0.22
HDAC4-211ENST00000494800 PPWD1Q96BP3 646 aaKnown RBP16.4■□□□□ 0.22
HDAC4-211ENST00000494800 SENP5Q96HI0 755 aaPredicted RBP16.4■□□□□ 0.22
HDAC4-211ENST00000494800 FBXL20Q96IG2 436 aa16.4■□□□□ 0.22
HDAC4-211ENST00000494800 CNPPD1Q9BV87 410 aa16.4■□□□□ 0.22
HDAC4-211ENST00000494800 FAIM2Q9BWQ8 316 aa16.4■□□□□ 0.22
HDAC4-211ENST00000494800 MID1IP1Q9NPA3 183 aa16.4■□□□□ 0.22
HDAC4-211ENST00000494800 HPF1Q9NWY4 346 aa16.4■□□□□ 0.22
HDAC4-211ENST00000494800 SEC14L3Q9UDX4 400 aa16.4■□□□□ 0.22
HDAC4-211ENST00000494800 ZNF225Q9UK10 706 aa16.4■□□□□ 0.22
HDAC4-211ENST00000494800 PSME2Q9UL46 239 aa16.4■□□□□ 0.22
HDAC4-211ENST00000494800 OSGIN2Q9Y236 505 aa16.4■□□□□ 0.22
HDAC4-211ENST00000494800 RELNP78509 3460 aa16.39■□□□□ 0.21
HDAC4-211ENST00000494800 C1orf226A1L170 272 aa16.39■□□□□ 0.21
HDAC4-211ENST00000494800 GOLGA6L10A6NI86 522 aa16.39■□□□□ 0.21
HDAC4-211ENST00000494800 FOXO6A8MYZ6 492 aa16.39■□□□□ 0.21
HDAC4-211ENST00000494800 WWP2O00308 870 aa16.39■□□□□ 0.21
HDAC4-211ENST00000494800 DEKP35659 375 aaKnown RBP16.39■□□□□ 0.21
HDAC4-211ENST00000494800 NAGLUP54802 743 aa16.39■□□□□ 0.21
HDAC4-211ENST00000494800 PER3P56645 1201 aa16.39■□□□□ 0.21
HDAC4-211ENST00000494800 TRA2BP62995 288 aaKnown RBP16.39■□□□□ 0.21
HDAC4-211ENST00000494800 PMP22Q01453 160 aa16.39■□□□□ 0.21
HDAC4-211ENST00000494800 SRSF1Q07955 248 aaKnown RBP eCLIP16.39■□□□□ 0.21
HDAC4-211ENST00000494800 SPRED3Q2MJR0 410 aa16.39■□□□□ 0.21
HDAC4-211ENST00000494800 SPIN4Q56A73 249 aa16.39■□□□□ 0.21
HDAC4-211ENST00000494800 SLC29A4Q7RTT9 530 aa16.39■□□□□ 0.21
HDAC4-211ENST00000494800 C1orf52Q8N6N3 182 aaKnown RBP16.39■□□□□ 0.21
HDAC4-211ENST00000494800 POGLUT1Q8NBL1 392 aa16.39■□□□□ 0.21
HDAC4-211ENST00000494800 OR2W6PQ8NHA6 318 aa16.39■□□□□ 0.21
HDAC4-211ENST00000494800 ZNF721Q8TF20 911 aa16.39■□□□□ 0.21
HDAC4-211ENST00000494800 HBEGFQ99075 208 aa16.39■□□□□ 0.21
HDAC4-211ENST00000494800 HES7Q9BYE0 225 aa16.39■□□□□ 0.21
HDAC4-211ENST00000494800 GSTO2Q9H4Y5 243 aa16.39■□□□□ 0.21
HDAC4-211ENST00000494800 RYDENQ9NUL5 291 aaKnown RBP16.39■□□□□ 0.21
HDAC4-211ENST00000494800 OXSMQ9NWU1 459 aa16.39■□□□□ 0.21
HDAC4-211ENST00000494800 TEX10Q9NXF1 929 aaPredicted RBP16.39■□□□□ 0.21
HDAC4-211ENST00000494800 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.39■□□□□ 0.21
HDAC4-211ENST00000494800 V9GYY5 206 aaPredicted RBP16.39■□□□□ 0.21
HDAC4-211ENST00000494800 ASPDHA6ND91 283 aa16.38■□□□□ 0.21
HDAC4-211ENST00000494800 PRKNO60260 465 aaPredicted RBP16.38■□□□□ 0.21
HDAC4-211ENST00000494800 SEMA7AO75326 666 aa16.38■□□□□ 0.21
HDAC4-211ENST00000494800 UNC5CO95185 931 aa16.38■□□□□ 0.21
HDAC4-211ENST00000494800 TUBBP07437 444 aa16.38■□□□□ 0.21
HDAC4-211ENST00000494800 TDGF1P3P51864 188 aa16.38■□□□□ 0.21
HDAC4-211ENST00000494800 HK2P52789 917 aa16.38■□□□□ 0.21
HDAC4-211ENST00000494800 SLC18A2Q05940 514 aa16.38■□□□□ 0.21
HDAC4-211ENST00000494800 GALNT1Q10472 559 aaPredicted RBP16.38■□□□□ 0.21
HDAC4-211ENST00000494800 TBL3Q12788 808 aaKnown RBP16.38■□□□□ 0.21
HDAC4-211ENST00000494800 ZNF267Q14586 743 aaPredicted RBP16.38■□□□□ 0.21
HDAC4-211ENST00000494800 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.38■□□□□ 0.21
HDAC4-211ENST00000494800 KRTCAP3Q53RY4 240 aa16.38■□□□□ 0.21
HDAC4-211ENST00000494800 TCHHL1Q5QJ38 904 aaPredicted RBP16.38■□□□□ 0.21
HDAC4-211ENST00000494800 LIPMQ5VYY2 423 aa16.38■□□□□ 0.21
HDAC4-211ENST00000494800 OPN5Q6U736 354 aa16.38■□□□□ 0.21
HDAC4-211ENST00000494800 RNF111Q6ZNA4 994 aa16.38■□□□□ 0.21
HDAC4-211ENST00000494800 FRMD7Q6ZUT3 714 aa16.38■□□□□ 0.21
HDAC4-211ENST00000494800 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.38■□□□□ 0.21
HDAC4-211ENST00000494800 HOMEZQ8IX15 550 aa16.38■□□□□ 0.21
HDAC4-211ENST00000494800 ZNF321PQ8N8H1 164 aa16.38■□□□□ 0.21
HDAC4-211ENST00000494800 NUBPLQ8TB37 319 aa16.38■□□□□ 0.21
HDAC4-211ENST00000494800 SLC22A8Q8TCC7 542 aa16.38■□□□□ 0.21
HDAC4-211ENST00000494800 AGAP11Q8TF27 550 aa16.38■□□□□ 0.21
HDAC4-211ENST00000494800 APOPT1Q96IL0 206 aa16.38■□□□□ 0.21
HDAC4-211ENST00000494800 FRMD6Q96NE9 622 aa16.38■□□□□ 0.21
HDAC4-211ENST00000494800 RASL10BQ96S79 203 aa16.38■□□□□ 0.21
HDAC4-211ENST00000494800 MKS1Q9NXB0 559 aa16.38■□□□□ 0.21
HDAC4-211ENST00000494800 LGALS13Q9UHV8 139 aa16.38■□□□□ 0.21
HDAC4-211ENST00000494800 A0A1B0GUH1 482 aa16.37■□□□□ 0.21
HDAC4-211ENST00000494800 GNG14A0A1W2PPG7 69 aa16.37■□□□□ 0.21
HDAC4-211ENST00000494800 OR6C76A6NM76 312 aa16.37■□□□□ 0.21
HDAC4-211ENST00000494800 PGRMC2O15173 223 aa16.37■□□□□ 0.21
HDAC4-211ENST00000494800 IGKV3-11P04433 115 aa16.37■□□□□ 0.21
HDAC4-211ENST00000494800 ZNF24P17028 368 aa16.37■□□□□ 0.21
HDAC4-211ENST00000494800 XKP51811 444 aa16.37■□□□□ 0.21
HDAC4-211ENST00000494800 CASP6P55212 293 aa16.37■□□□□ 0.21
HDAC4-211ENST00000494800 ERVK-8P63133 956 aa16.37■□□□□ 0.21
HDAC4-211ENST00000494800 ACSM2AQ08AH3 577 aa16.37■□□□□ 0.21
HDAC4-211ENST00000494800 IMPG1Q17R60 797 aa16.37■□□□□ 0.21
HDAC4-211ENST00000494800 ERCC6LQ2NKX8 1250 aa16.37■□□□□ 0.21
HDAC4-211ENST00000494800 C4orf17Q53FE4 359 aa16.37■□□□□ 0.21
HDAC4-211ENST00000494800 ACSM2BQ68CK6 577 aa16.37■□□□□ 0.21
HDAC4-211ENST00000494800 IL20RBQ6UXL0 311 aa16.37■□□□□ 0.21
HDAC4-211ENST00000494800 GALNT12Q8IXK2 581 aa16.37■□□□□ 0.21
HDAC4-211ENST00000494800 SRRM1Q8IYB3 904 aaKnown RBP16.37■□□□□ 0.21
HDAC4-211ENST00000494800 SREK1Q8WXA9 508 aaKnown RBP16.37■□□□□ 0.21
HDAC4-211ENST00000494800 SMC6Q96SB8 1091 aa16.37■□□□□ 0.21
HDAC4-211ENST00000494800 LIN28AQ9H9Z2 209 aaKnown RBP16.37■□□□□ 0.21
HDAC4-211ENST00000494800 MCM8Q9UJA3 840 aa16.37■□□□□ 0.21
HDAC4-211ENST00000494800 ERVK-19Q9WJR5 959 aa16.37■□□□□ 0.21
HDAC4-211ENST00000494800 TIMM22Q9Y584 194 aa16.37■□□□□ 0.21
HDAC4-211ENST00000494800 PCDHA9Q9Y5H5 950 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms