RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 CCL23P55773 120 aa14.6□□□□□ -0.07
SDF4-207ENST00000494748 FABP5Q01469 135 aa14.6□□□□□ -0.07
SDF4-207ENST00000494748 RIN1Q13671 783 aa14.6□□□□□ -0.07
SDF4-207ENST00000494748 SLC25A30Q5SVS4 291 aa14.6□□□□□ -0.07
SDF4-207ENST00000494748 CNIH2Q6PI25 160 aa14.6□□□□□ -0.07
SDF4-207ENST00000494748 CD200R1LQ6Q8B3 271 aa14.6□□□□□ -0.07
SDF4-207ENST00000494748 USP30Q70CQ3 517 aa14.6□□□□□ -0.07
SDF4-207ENST00000494748 SIX5Q8N196 739 aa14.6□□□□□ -0.07
SDF4-207ENST00000494748 FAM26EQ8N5C1 309 aa14.6□□□□□ -0.07
SDF4-207ENST00000494748 ZNF485Q8NCK3 441 aa14.6□□□□□ -0.07
SDF4-207ENST00000494748 GALNT9Q9HCQ5 603 aa14.6□□□□□ -0.07
SDF4-207ENST00000494748 NLKQ9UBE8 527 aa14.6□□□□□ -0.07
SDF4-207ENST00000494748 DNMT3AQ9Y6K1 912 aaPredicted RBP14.6□□□□□ -0.07
SDF4-207ENST00000494748 A0A1W2PQ72 361 aa14.59□□□□□ -0.07
SDF4-207ENST00000494748 SHISA3A0PJX4 238 aa14.59□□□□□ -0.07
SDF4-207ENST00000494748 WASHC1A8K0Z3 465 aa14.59□□□□□ -0.07
SDF4-207ENST00000494748 UBL4AP11441 157 aa14.59□□□□□ -0.07
SDF4-207ENST00000494748 ATP1B2P14415 290 aaPredicted RBP14.59□□□□□ -0.07
SDF4-207ENST00000494748 UQCRC1P31930 480 aa14.59□□□□□ -0.07
SDF4-207ENST00000494748 XKP51811 444 aa14.59□□□□□ -0.07
SDF4-207ENST00000494748 ZNF763Q0D2J5 394 aa14.59□□□□□ -0.07
SDF4-207ENST00000494748 OR2G6Q5TZ20 316 aa14.59□□□□□ -0.07
SDF4-207ENST00000494748 TPRG1Q6ZUI0 275 aa14.59□□□□□ -0.07
SDF4-207ENST00000494748 RBM45Q8IUH3 476 aaKnown RBP14.59□□□□□ -0.07
SDF4-207ENST00000494748 BCL7CQ8WUZ0 217 aaPredicted RBP14.59□□□□□ -0.07
SDF4-207ENST00000494748 ECHDC3Q96DC8 303 aa14.59□□□□□ -0.07
SDF4-207ENST00000494748 SCRN2Q96FV2 425 aa14.59□□□□□ -0.07
SDF4-207ENST00000494748 TM9SF2Q99805 663 aa14.59□□□□□ -0.07
SDF4-207ENST00000494748 TMEM43Q9BTV4 400 aa14.59□□□□□ -0.07
SDF4-207ENST00000494748 ANKRA2Q9H9E1 313 aa14.59□□□□□ -0.07
SDF4-207ENST00000494748 CLEC4EQ9ULY5 219 aa14.59□□□□□ -0.07
SDF4-207ENST00000494748 SH2B3Q9UQQ2 575 aa14.59□□□□□ -0.07
SDF4-207ENST00000494748 PPIL1Q9Y3C6 166 aa14.59□□□□□ -0.07
SDF4-207ENST00000494748 MYL12BO14950 172 aa14.59□□□□□ -0.07
SDF4-207ENST00000494748 SLCO2B1O94956 709 aa14.59□□□□□ -0.07
SDF4-207ENST00000494748 ARSBP15848 533 aa14.59□□□□□ -0.07
SDF4-207ENST00000494748 CD79BP40259 229 aa14.59□□□□□ -0.07
SDF4-207ENST00000494748 GATMP50440 423 aa14.59□□□□□ -0.07
SDF4-207ENST00000494748 HEPACAMQ14CZ8 416 aa14.59□□□□□ -0.07
SDF4-207ENST00000494748 CDONQ4KMG0 1287 aa14.59□□□□□ -0.07
SDF4-207ENST00000494748 TRIM40Q6P9F5 258 aa14.59□□□□□ -0.07
SDF4-207ENST00000494748 Q8N402 240 aa14.59□□□□□ -0.07
SDF4-207ENST00000494748 NATD1Q8N6N6 113 aa14.59□□□□□ -0.07
SDF4-207ENST00000494748 BMPERQ8N8U9 685 aa14.59□□□□□ -0.07
SDF4-207ENST00000494748 WDR48Q8TAF3 677 aa14.59□□□□□ -0.07
SDF4-207ENST00000494748 TMEM163Q8TC26 289 aa14.59□□□□□ -0.07
SDF4-207ENST00000494748 KCTD7Q96MP8 289 aa14.59□□□□□ -0.07
SDF4-207ENST00000494748 KCNN3Q9UGI6 736 aa14.59□□□□□ -0.07
SDF4-207ENST00000494748 MGAT4BQ9UQ53 548 aa14.59□□□□□ -0.07
SDF4-207ENST00000494748 PCDHGB7Q9Y5F8 929 aa14.59□□□□□ -0.07
SDF4-207ENST00000494748 HPGDSO60760 199 aa14.59□□□□□ -0.07
SDF4-207ENST00000494748 SLC2A2P11168 524 aaPredicted RBP14.59□□□□□ -0.07
SDF4-207ENST00000494748 CYBAP13498 195 aa14.59□□□□□ -0.07
SDF4-207ENST00000494748 NAE1Q13564 534 aa14.59□□□□□ -0.07
SDF4-207ENST00000494748 TPBGQ13641 420 aa14.59□□□□□ -0.07
SDF4-207ENST00000494748 FAM71E1Q6IPT2 247 aa14.59□□□□□ -0.07
SDF4-207ENST00000494748 AGTRAPQ6RW13 159 aa14.59□□□□□ -0.07
SDF4-207ENST00000494748 COMMD6Q7Z4G1 85 aa14.59□□□□□ -0.07
SDF4-207ENST00000494748 COMTD1Q86VU5 262 aa14.59□□□□□ -0.07
SDF4-207ENST00000494748 MMP21Q8N119 569 aa14.59□□□□□ -0.07
SDF4-207ENST00000494748 C2orf15Q8WU43 125 aaKnown RBP14.59□□□□□ -0.07
SDF4-207ENST00000494748 MARVELD3Q96A59 401 aa14.59□□□□□ -0.07
SDF4-207ENST00000494748 QRFPRQ96P65 431 aa14.59□□□□□ -0.07
SDF4-207ENST00000494748 ATF6BQ99941 703 aa14.59□□□□□ -0.07
SDF4-207ENST00000494748 EIF3KQ9UBQ5 218 aaKnown RBP14.59□□□□□ -0.07
SDF4-207ENST00000494748 ACAD8Q9UKU7 415 aa14.59□□□□□ -0.07
SDF4-207ENST00000494748 SPIN1Q9Y657 262 aaPredicted RBP14.59□□□□□ -0.07
SDF4-207ENST00000494748 CDH10Q9Y6N8 788 aa14.59□□□□□ -0.07
SDF4-207ENST00000494748 LYRM1O43325 122 aa14.58□□□□□ -0.07
SDF4-207ENST00000494748 ADAMTS4O75173 837 aa14.58□□□□□ -0.07
SDF4-207ENST00000494748 SLC43A1O75387 559 aa14.58□□□□□ -0.07
SDF4-207ENST00000494748 RAB36O95755 333 aa14.58□□□□□ -0.07
SDF4-207ENST00000494748 MYL12AP19105 171 aa14.58□□□□□ -0.07
SDF4-207ENST00000494748 IMPA1P29218 277 aa14.58□□□□□ -0.07
SDF4-207ENST00000494748 TOR2AQ5JU69 321 aa14.58□□□□□ -0.07
SDF4-207ENST00000494748 FUT10Q6P4F1 479 aa14.58□□□□□ -0.07
SDF4-207ENST00000494748 OR56A3Q8NH54 315 aa14.58□□□□□ -0.07
SDF4-207ENST00000494748 CLP1Q92989 425 aaKnown RBP14.58□□□□□ -0.07
SDF4-207ENST00000494748 BHMTQ93088 406 aa14.58□□□□□ -0.07
SDF4-207ENST00000494748 PDXPQ96GD0 296 aa14.58□□□□□ -0.07
SDF4-207ENST00000494748 ZNF582Q96NG8 517 aaPredicted RBP14.58□□□□□ -0.07
SDF4-207ENST00000494748 MVB12BQ9H7P6 319 aa14.58□□□□□ -0.07
SDF4-207ENST00000494748 OR12D1P0DN82 309 aa14.58□□□□□ -0.08
SDF4-207ENST00000494748 IFI30P13284 250 aa14.58□□□□□ -0.08
SDF4-207ENST00000494748 DDX5P17844 614 aaKnown RBP14.58□□□□□ -0.08
SDF4-207ENST00000494748 CTGFP29279 349 aa14.58□□□□□ -0.08
SDF4-207ENST00000494748 SLC11A1P49279 550 aa14.58□□□□□ -0.08
SDF4-207ENST00000494748 C1DQ13901 141 aaKnown RBP14.58□□□□□ -0.08
SDF4-207ENST00000494748 NFE2L1Q14494 772 aa14.58□□□□□ -0.08
SDF4-207ENST00000494748 CCNJQ5T5M9 372 aa14.58□□□□□ -0.08
SDF4-207ENST00000494748 SLCO4C1Q6ZQN7 724 aa14.58□□□□□ -0.08
SDF4-207ENST00000494748 IDO2Q6ZQW0 420 aa14.58□□□□□ -0.08
SDF4-207ENST00000494748 TAGAPQ8N103 731 aa14.58□□□□□ -0.08
SDF4-207ENST00000494748 PLA2G15Q8NCC3 412 aa14.58□□□□□ -0.08
SDF4-207ENST00000494748 SLC22A12Q96S37 553 aa14.58□□□□□ -0.08
SDF4-207ENST00000494748 POLDIP3Q9BY77 421 aaKnown RBP14.58□□□□□ -0.08
SDF4-207ENST00000494748 RERGLQ9H628 205 aa14.58□□□□□ -0.08
SDF4-207ENST00000494748 MALT1Q9UDY8 824 aa14.58□□□□□ -0.08
SDF4-207ENST00000494748 ANGPT4Q9Y264 503 aa14.58□□□□□ -0.08
SDF4-207ENST00000494748 HSPB11Q9Y547 144 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms