RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 ECSCRQ19T08 205 aa3.67□□□□□ -1.82
SMC4-224ENST00000494612 RFTN2Q52LD8 501 aaPredicted RBP3.67□□□□□ -1.82
SMC4-224ENST00000494612 PRAMEF7Q5VXH5 474 aa3.67□□□□□ -1.82
SMC4-224ENST00000494612 TRIM65Q6PJ69 517 aa3.67□□□□□ -1.82
SMC4-224ENST00000494612 C3P1Q6ZMU1 363 aa3.67□□□□□ -1.82
SMC4-224ENST00000494612 ZFAND4Q86XD8 727 aa3.67□□□□□ -1.82
SMC4-224ENST00000494612 MIPOL1Q8TD10 442 aa3.67□□□□□ -1.82
SMC4-224ENST00000494612 GTF3AQ92664 365 aaKnown RBP3.67□□□□□ -1.82
SMC4-224ENST00000494612 MRPL24Q96A35 216 aaKnown RBP3.67□□□□□ -1.82
SMC4-224ENST00000494612 DTD2Q96FN9 168 aa3.67□□□□□ -1.82
SMC4-224ENST00000494612 ATP6V0BQ99437 205 aa3.67□□□□□ -1.82
SMC4-224ENST00000494612 SSX3Q99909 188 aa3.67□□□□□ -1.82
SMC4-224ENST00000494612 FAM213AQ9BRX8 229 aa3.67□□□□□ -1.82
SMC4-224ENST00000494612 LRRC61Q9BV99 259 aa3.67□□□□□ -1.82
SMC4-224ENST00000494612 FUNDC2Q9BWH2 189 aa3.67□□□□□ -1.82
SMC4-224ENST00000494612 WWP1Q9H0M0 922 aa3.67□□□□□ -1.82
SMC4-224ENST00000494612 ZDHHC6Q9H6R6 413 aa3.67□□□□□ -1.82
SMC4-224ENST00000494612 MARCH7Q9H992 704 aa3.67□□□□□ -1.82
SMC4-224ENST00000494612 COMMD8Q9NX08 183 aa3.67□□□□□ -1.82
SMC4-224ENST00000494612 CYP39A1Q9NYL5 469 aa3.67□□□□□ -1.82
SMC4-224ENST00000494612 MRTO4Q9UKD2 239 aaKnown RBP3.67□□□□□ -1.82
SMC4-224ENST00000494612 ZNF346Q9UL40 294 aaKnown RBP3.67□□□□□ -1.82
SMC4-224ENST00000494612 FOXA2Q9Y261 457 aaPredicted RBP3.67□□□□□ -1.82
SMC4-224ENST00000494612 KIF7Q2M1P5 1343 aa3.67□□□□□ -1.82
SMC4-224ENST00000494612 DNMT1P26358 1616 aaKnown RBP3.66□□□□□ -1.82
SMC4-224ENST00000494612 PREX2Q70Z35 1606 aa3.66□□□□□ -1.82
SMC4-224ENST00000494612 IGHV3-38A0A0C4DH36 116 aa3.66□□□□□ -1.82
SMC4-224ENST00000494612 A0A0J9YWU9 116 aa3.66□□□□□ -1.82
SMC4-224ENST00000494612 LOC390937A0A1W2PQ73 354 aa3.66□□□□□ -1.82
SMC4-224ENST00000494612 SLC28A1O00337 649 aa3.66□□□□□ -1.82
SMC4-224ENST00000494612 SNAP91O60641 907 aa3.66□□□□□ -1.82
SMC4-224ENST00000494612 HSF2BPO75031 334 aa3.66□□□□□ -1.82
SMC4-224ENST00000494612 ANXA9O76027 345 aa3.66□□□□□ -1.82
SMC4-224ENST00000494612 FGF19O95750 216 aa3.66□□□□□ -1.82
SMC4-224ENST00000494612 RNF224P0DH78 156 aa3.66□□□□□ -1.82
SMC4-224ENST00000494612 ANPEPP15144 967 aa3.66□□□□□ -1.82
SMC4-224ENST00000494612 AREGP15514 252 aa3.66□□□□□ -1.82
SMC4-224ENST00000494612 PKLRP30613 574 aa3.66□□□□□ -1.82
SMC4-224ENST00000494612 FHITP49789 147 aa3.66□□□□□ -1.82
SMC4-224ENST00000494612 GABPAQ06546 454 aa3.66□□□□□ -1.82
SMC4-224ENST00000494612 ZNF146Q15072 292 aa3.66□□□□□ -1.82
SMC4-224ENST00000494612 EPC2Q52LR7 807 aa3.66□□□□□ -1.82
SMC4-224ENST00000494612 ETFRF1Q6IPR1 90 aa3.66□□□□□ -1.82
SMC4-224ENST00000494612 CD164L2Q6UWJ8 174 aa3.66□□□□□ -1.82
SMC4-224ENST00000494612 B3GLCTQ6Y288 498 aa3.66□□□□□ -1.82
SMC4-224ENST00000494612 CYP4V2Q6ZWL3 525 aaPredicted RBP3.66□□□□□ -1.82
SMC4-224ENST00000494612 TBC1D10CQ8IV04 446 aa3.66□□□□□ -1.82
SMC4-224ENST00000494612 OR4N5Q8IXE1 308 aa3.66□□□□□ -1.82
SMC4-224ENST00000494612 CCNYQ8ND76 341 aa3.66□□□□□ -1.82
SMC4-224ENST00000494612 SPPL2AQ8TCT8 520 aa3.66□□□□□ -1.82
SMC4-224ENST00000494612 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.66□□□□□ -1.82
SMC4-224ENST00000494612 ALKBH3Q96Q83 286 aaPredicted RBP3.66□□□□□ -1.82
SMC4-224ENST00000494612 LGMNQ99538 433 aa3.66□□□□□ -1.82
SMC4-224ENST00000494612 TRIM15Q9C019 465 aa3.66□□□□□ -1.82
SMC4-224ENST00000494612 KCNMB3Q9NPA1 279 aa3.66□□□□□ -1.82
SMC4-224ENST00000494612 GDF3Q9NR23 364 aa3.66□□□□□ -1.82
SMC4-224ENST00000494612 TECRQ9NZ01 308 aaKnown RBP3.66□□□□□ -1.82
SMC4-224ENST00000494612 MOSPD1Q9UJG1 213 aa3.66□□□□□ -1.82
SMC4-224ENST00000494612 MOB4Q9Y3A3 225 aa3.66□□□□□ -1.82
SMC4-224ENST00000494612 STRAPQ9Y3F4 350 aaKnown RBP3.66□□□□□ -1.82
SMC4-224ENST00000494612 KNSTRNQ9Y448 316 aa3.66□□□□□ -1.82
SMC4-224ENST00000494612 TROQ12816 1431 aaPredicted RBP3.66□□□□□ -1.82
SMC4-224ENST00000494612 SPAG9O60271 1321 aaKnown RBP3.66□□□□□ -1.82
SMC4-224ENST00000494612 A2ML1A8K2U0 1454 aa3.66□□□□□ -1.82
SMC4-224ENST00000494612 RNF17Q9BXT8 1623 aaKnown RBP3.66□□□□□ -1.82
SMC4-224ENST00000494612 DHX29Q7Z478 1369 aaKnown RBP3.65□□□□□ -1.82
SMC4-224ENST00000494612 SETD1AO15047 1707 aaKnown RBP3.65□□□□□ -1.82
SMC4-224ENST00000494612 SAMD9LQ8IVG5 1584 aa3.65□□□□□ -1.82
SMC4-224ENST00000494612 NEURL4Q96JN8 1562 aa3.65□□□□□ -1.82
SMC4-224ENST00000494612 FMN1Q68DA7 1419 aa3.65□□□□□ -1.83
SMC4-224ENST00000494612 MACROD2A1Z1Q3 448 aa3.65□□□□□ -1.83
SMC4-224ENST00000494612 RNF103O00237 685 aa3.65□□□□□ -1.83
SMC4-224ENST00000494612 PDHXO00330 501 aa3.65□□□□□ -1.83
SMC4-224ENST00000494612 KIAA0513O60268 411 aa3.65□□□□□ -1.83
SMC4-224ENST00000494612 BCAS2O75934 225 aaPredicted RBP3.65□□□□□ -1.83
SMC4-224ENST00000494612 REC8O95072 547 aa3.65□□□□□ -1.83
SMC4-224ENST00000494612 CXCL14O95715 111 aa3.65□□□□□ -1.83
SMC4-224ENST00000494612 ABHD2P08910 425 aa3.65□□□□□ -1.83
SMC4-224ENST00000494612 GLRA1P23415 457 aa3.65□□□□□ -1.83
SMC4-224ENST00000494612 RPL9P32969 192 aaKnown RBP3.65□□□□□ -1.83
SMC4-224ENST00000494612 CAPGP40121 348 aa3.65□□□□□ -1.83
SMC4-224ENST00000494612 MTIF2P46199 727 aaKnown RBP3.65□□□□□ -1.83
SMC4-224ENST00000494612 ATP4BP51164 291 aa3.65□□□□□ -1.83
SMC4-224ENST00000494612 CNN1P51911 297 aaKnown RBP3.65□□□□□ -1.83
SMC4-224ENST00000494612 GEMP55040 296 aa3.65□□□□□ -1.83
SMC4-224ENST00000494612 RPL27P61353 136 aaKnown RBP3.65□□□□□ -1.83
SMC4-224ENST00000494612 FKBP3Q00688 224 aaKnown RBP3.65□□□□□ -1.83
SMC4-224ENST00000494612 MS4A18Q3C1V0 323 aa3.65□□□□□ -1.83
SMC4-224ENST00000494612 CMPK2Q5EBM0 449 aa3.65□□□□□ -1.83
SMC4-224ENST00000494612 ZNF772Q68DY9 489 aaPredicted RBP3.65□□□□□ -1.83
SMC4-224ENST00000494612 ZNF613Q6PF04 617 aa3.65□□□□□ -1.83
SMC4-224ENST00000494612 FAM131BQ86XD5 332 aa3.65□□□□□ -1.83
SMC4-224ENST00000494612 GPATCH11Q8N954 259 aa3.65□□□□□ -1.83
SMC4-224ENST00000494612 SIDT2Q8NBJ9 832 aaKnown RBP3.65□□□□□ -1.83
SMC4-224ENST00000494612 SSC4DQ8WTU2 575 aa3.65□□□□□ -1.83
SMC4-224ENST00000494612 GLYATL1Q969I3 302 aa3.65□□□□□ -1.83
SMC4-224ENST00000494612 ZNF689Q96CS4 500 aaPredicted RBP3.65□□□□□ -1.83
SMC4-224ENST00000494612 SLC45A3Q96JT2 553 aa3.65□□□□□ -1.83
SMC4-224ENST00000494612 ZNF597Q96LX8 424 aa3.65□□□□□ -1.83
SMC4-224ENST00000494612 TRIM51Q9BSJ1 452 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms