RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 PIGGQ5H8A4 983 aa11.65□□□□□ -0.54
SKA1-205ENST00000494518 SLC22A10Q63ZE4 541 aa11.65□□□□□ -0.54
SKA1-205ENST00000494518 MED27Q6P2C8 311 aa11.65□□□□□ -0.54
SKA1-205ENST00000494518 ADGRD1Q6QNK2 874 aa11.65□□□□□ -0.54
SKA1-205ENST00000494518 LYPD8Q6UX82 237 aa11.65□□□□□ -0.54
SKA1-205ENST00000494518 TMEM64Q6YI46 380 aa11.65□□□□□ -0.54
SKA1-205ENST00000494518 LRRC70Q7Z2Q7 622 aa11.65□□□□□ -0.54
SKA1-205ENST00000494518 MYLK4Q86YV6 388 aaPredicted RBP11.65□□□□□ -0.54
SKA1-205ENST00000494518 CTAGE3PQ8IX95 158 aa11.65□□□□□ -0.54
SKA1-205ENST00000494518 OR10G3Q8NGC4 313 aa11.65□□□□□ -0.54
SKA1-205ENST00000494518 OR8K3Q8NH51 312 aa11.65□□□□□ -0.54
SKA1-205ENST00000494518 SLC22A8Q8TCC7 542 aa11.65□□□□□ -0.54
SKA1-205ENST00000494518 CDKL2Q92772 493 aa11.65□□□□□ -0.54
SKA1-205ENST00000494518 SARAFQ96BY9 339 aa11.65□□□□□ -0.54
SKA1-205ENST00000494518 GPR22Q99680 433 aa11.65□□□□□ -0.54
SKA1-205ENST00000494518 GPATCH1Q9BRR8 931 aaKnown RBP11.65□□□□□ -0.54
SKA1-205ENST00000494518 ERVK-6Q9BXR3 956 aa11.65□□□□□ -0.54
SKA1-205ENST00000494518 CD244Q9BZW8 370 aa11.65□□□□□ -0.54
SKA1-205ENST00000494518 ZNF703Q9H7S9 590 aaPredicted RBP11.65□□□□□ -0.54
SKA1-205ENST00000494518 ERVK-19Q9WJR5 959 aa11.65□□□□□ -0.54
SKA1-205ENST00000494518 TCRBV9S1A1TA0A576 114 aa11.64□□□□□ -0.55
SKA1-205ENST00000494518 SYNDIG1LA6NDD5 238 aa11.64□□□□□ -0.55
SKA1-205ENST00000494518 LRRC3CA6NJW4 275 aa11.64□□□□□ -0.55
SKA1-205ENST00000494518 GLOD5A6NK44 160 aa11.64□□□□□ -0.55
SKA1-205ENST00000494518 WDR1O75083 606 aa11.64□□□□□ -0.55
SKA1-205ENST00000494518 IGKV3-11P04433 115 aa11.64□□□□□ -0.55
SKA1-205ENST00000494518 UQCRC1P31930 480 aa11.64□□□□□ -0.55
SKA1-205ENST00000494518 GP5P40197 560 aa11.64□□□□□ -0.55
SKA1-205ENST00000494518 RAB10P61026 200 aa11.64□□□□□ -0.55
SKA1-205ENST00000494518 GNG11P61952 73 aa11.64□□□□□ -0.55
SKA1-205ENST00000494518 TNFRSF17Q02223 184 aa11.64□□□□□ -0.55
SKA1-205ENST00000494518 TBCCQ15814 346 aa11.64□□□□□ -0.55
SKA1-205ENST00000494518 MPEG1Q2M385 716 aa11.64□□□□□ -0.55
SKA1-205ENST00000494518 HYAL4Q2M3T9 481 aa11.64□□□□□ -0.55
SKA1-205ENST00000494518 ZNF791Q3KP31 576 aaPredicted RBP11.64□□□□□ -0.55
SKA1-205ENST00000494518 TMEM35AQ53FP2 167 aa11.64□□□□□ -0.55
SKA1-205ENST00000494518 KHDRBS2Q5VWX1 349 aaKnown RBP11.64□□□□□ -0.55
SKA1-205ENST00000494518 ARSKQ6UWY0 536 aa11.64□□□□□ -0.55
SKA1-205ENST00000494518 RAPH1Q70E73 1250 aa11.64□□□□□ -0.55
SKA1-205ENST00000494518 CHSY3Q70JA7 882 aa11.64□□□□□ -0.55
SKA1-205ENST00000494518 BBOF1Q8ND07 529 aa11.64□□□□□ -0.55
SKA1-205ENST00000494518 SRFBP1Q8NEF9 429 aaKnown RBP11.64□□□□□ -0.55
SKA1-205ENST00000494518 OR7G3Q8NG95 312 aa11.64□□□□□ -0.55
SKA1-205ENST00000494518 NUBPLQ8TB37 319 aa11.64□□□□□ -0.55
SKA1-205ENST00000494518 UCN3Q969E3 161 aa11.64□□□□□ -0.55
SKA1-205ENST00000494518 SPACA9Q96E40 222 aaPredicted RBP11.64□□□□□ -0.55
SKA1-205ENST00000494518 MTERF1Q99551 399 aaKnown RBP11.64□□□□□ -0.55
SKA1-205ENST00000494518 CPNE1Q99829 537 aa11.64□□□□□ -0.55
SKA1-205ENST00000494518 RPF2Q9H7B2 306 aaKnown RBP11.64□□□□□ -0.55
SKA1-205ENST00000494518 PROK2Q9HC23 129 aa11.64□□□□□ -0.55
SKA1-205ENST00000494518 SH2D2AQ9NP31 389 aa11.64□□□□□ -0.55
SKA1-205ENST00000494518 CCM2LQ9NUG4 571 aaPredicted RBP11.64□□□□□ -0.55
SKA1-205ENST00000494518 NUDT4Q9NZJ9 180 aa11.64□□□□□ -0.55
SKA1-205ENST00000494518 OPTCQ9UBM4 332 aa11.64□□□□□ -0.55
SKA1-205ENST00000494518 LRRC14BA6NHZ5 514 aa11.63□□□□□ -0.55
SKA1-205ENST00000494518 CCDC188H7C350 402 aa11.63□□□□□ -0.55
SKA1-205ENST00000494518 K7EPI3 171 aa11.63□□□□□ -0.55
SKA1-205ENST00000494518 PLPP1O14494 284 aa11.63□□□□□ -0.55
SKA1-205ENST00000494518 SUSD5O60279 629 aa11.63□□□□□ -0.55
SKA1-205ENST00000494518 OR10H2O60403 315 aa11.63□□□□□ -0.55
SKA1-205ENST00000494518 SCELO95171 688 aa11.63□□□□□ -0.55
SKA1-205ENST00000494518 ALOX15P16050 662 aaPredicted RBP11.63□□□□□ -0.55
SKA1-205ENST00000494518 RPS13P62277 151 aaKnown RBP11.63□□□□□ -0.55
SKA1-205ENST00000494518 IGLV3-21P80748 117 aaPredicted RBP11.63□□□□□ -0.55
SKA1-205ENST00000494518 PLIN5Q00G26 463 aa11.63□□□□□ -0.55
SKA1-205ENST00000494518 ZNF267Q14586 743 aaPredicted RBP11.63□□□□□ -0.55
SKA1-205ENST00000494518 CEBPEQ15744 281 aa11.63□□□□□ -0.55
SKA1-205ENST00000494518 ZKSCAN8Q15776 578 aaPredicted RBP11.63□□□□□ -0.55
SKA1-205ENST00000494518 CDKL4Q5MAI5 379 aa11.63□□□□□ -0.55
SKA1-205ENST00000494518 DEPDC1Q5TB30 811 aa11.63□□□□□ -0.55
SKA1-205ENST00000494518 BICRALQ6AI39 1079 aa11.63□□□□□ -0.55
SKA1-205ENST00000494518 OR4C11Q6IEV9 310 aa11.63□□□□□ -0.55
SKA1-205ENST00000494518 GPR180Q86V85 440 aa11.63□□□□□ -0.55
SKA1-205ENST00000494518 LAS2Q8IYD9 372 aa11.63□□□□□ -0.55
SKA1-205ENST00000494518 FBXW8Q8N3Y1 598 aa11.63□□□□□ -0.55
SKA1-205ENST00000494518 LIX1Q8N485 282 aa11.63□□□□□ -0.55
SKA1-205ENST00000494518 TEX9Q8N6V9 391 aa11.63□□□□□ -0.55
SKA1-205ENST00000494518 PPM1NQ8N819 430 aa11.63□□□□□ -0.55
SKA1-205ENST00000494518 RELL2Q8NC24 303 aaPredicted RBP11.63□□□□□ -0.55
SKA1-205ENST00000494518 HUS1BQ8NHY5 278 aa11.63□□□□□ -0.55
SKA1-205ENST00000494518 PAQR8Q8TEZ7 354 aa11.63□□□□□ -0.55
SKA1-205ENST00000494518 UBE2E3Q969T4 207 aa11.63□□□□□ -0.55
SKA1-205ENST00000494518 ZDHHC16Q969W1 377 aa11.63□□□□□ -0.55
SKA1-205ENST00000494518 CMTM7Q96FZ5 175 aa11.63□□□□□ -0.55
SKA1-205ENST00000494518 RBM18Q96H35 190 aaKnown RBP11.63□□□□□ -0.55
SKA1-205ENST00000494518 FBXL20Q96IG2 436 aa11.63□□□□□ -0.55
SKA1-205ENST00000494518 UBXN10Q96LJ8 280 aa11.63□□□□□ -0.55
SKA1-205ENST00000494518 NAPGQ99747 312 aaPredicted RBP11.63□□□□□ -0.55
SKA1-205ENST00000494518 POLDIP3Q9BY77 421 aaKnown RBP11.63□□□□□ -0.55
SKA1-205ENST00000494518 ZFP64Q9NPA5 681 aa11.63□□□□□ -0.55
SKA1-205ENST00000494518 DMRT3Q9NQL9 472 aa11.63□□□□□ -0.55
SKA1-205ENST00000494518 CRIM1Q9NZV1 1036 aa11.63□□□□□ -0.55
SKA1-205ENST00000494518 BOKQ9UMX3 212 aaPredicted RBP11.63□□□□□ -0.55
SKA1-205ENST00000494518 PLEKHA6Q9Y2H5 1048 aa11.63□□□□□ -0.55
SKA1-205ENST00000494518 SAR1BQ9Y6B6 198 aa11.63□□□□□ -0.55
SKA1-205ENST00000494518 MED12LQ86YW9 2145 aa11.62□□□□□ -0.55
SKA1-205ENST00000494518 C15orf38-AP3S2A0A0A6YYH1 394 aa11.62□□□□□ -0.55
SKA1-205ENST00000494518 IQANK1A0A1B0GTG1 560 aa11.62□□□□□ -0.55
SKA1-205ENST00000494518 A0A1W2PS29 197 aa11.62□□□□□ -0.55
SKA1-205ENST00000494518 FAM159BA6NKW6 160 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms