RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 ALPPL2P10696 532 aa10.06□□□□□ -0.8
CLCN6-208ENST00000494028 ELK4P28324 431 aa10.06□□□□□ -0.8
CLCN6-208ENST00000494028 GPC1P35052 558 aa10.06□□□□□ -0.8
CLCN6-208ENST00000494028 XCR1P46094 333 aa10.06□□□□□ -0.8
CLCN6-208ENST00000494028 CCT3P49368 545 aaKnown RBP10.06□□□□□ -0.8
CLCN6-208ENST00000494028 DAPP51397 102 aa10.06□□□□□ -0.8
CLCN6-208ENST00000494028 MAZP56270 477 aaKnown RBP10.06□□□□□ -0.8
CLCN6-208ENST00000494028 BTN3A2P78410 334 aa10.06□□□□□ -0.8
CLCN6-208ENST00000494028 SPIBQ01892 262 aa10.06□□□□□ -0.8
CLCN6-208ENST00000494028 LTB4RQ15722 352 aa10.06□□□□□ -0.8
CLCN6-208ENST00000494028 CTU2Q2VPK5 515 aaKnown RBP10.06□□□□□ -0.8
CLCN6-208ENST00000494028 FRMPD2BQ6IN97 320 aa10.06□□□□□ -0.8
CLCN6-208ENST00000494028 LAIR2Q6ISS4 152 aa10.06□□□□□ -0.8
CLCN6-208ENST00000494028 REEP3Q6NUK4 255 aa10.06□□□□□ -0.8
CLCN6-208ENST00000494028 BORAQ6PGQ7 559 aa10.06□□□□□ -0.8
CLCN6-208ENST00000494028 RBM44Q6ZP01 1051 aaKnown RBP10.06□□□□□ -0.8
CLCN6-208ENST00000494028 SZRD1Q7Z422 152 aa10.06□□□□□ -0.8
CLCN6-208ENST00000494028 TAF8Q7Z7C8 310 aa10.06□□□□□ -0.8
CLCN6-208ENST00000494028 OOSP2Q86WS3 158 aa10.06□□□□□ -0.8
CLCN6-208ENST00000494028 ZNF761Q86XN6 746 aaPredicted RBP10.06□□□□□ -0.8
CLCN6-208ENST00000494028 ARMC8Q8IUR7 673 aa10.06□□□□□ -0.8
CLCN6-208ENST00000494028 ZC3H7AQ8IWR0 971 aaKnown RBP10.06□□□□□ -0.8
CLCN6-208ENST00000494028 ZNF555Q8NEP9 628 aa10.06□□□□□ -0.8
CLCN6-208ENST00000494028 BAHD1Q8TBE0 780 aaPredicted RBP10.06□□□□□ -0.8
CLCN6-208ENST00000494028 FAM174AQ8TBP5 190 aa10.06□□□□□ -0.8
CLCN6-208ENST00000494028 FBLIM1Q8WUP2 373 aa10.06□□□□□ -0.8
CLCN6-208ENST00000494028 RAB8BQ92930 207 aa10.06□□□□□ -0.8
CLCN6-208ENST00000494028 KLHDC7BQ96G42 594 aa10.06□□□□□ -0.8
CLCN6-208ENST00000494028 ZNF681Q96N22 645 aa10.06□□□□□ -0.8
CLCN6-208ENST00000494028 ZNF300Q96RE9 604 aaPredicted RBP10.06□□□□□ -0.8
CLCN6-208ENST00000494028 BBS4Q96RK4 519 aa10.06□□□□□ -0.8
CLCN6-208ENST00000494028 CSF3RQ99062 836 aa10.06□□□□□ -0.8
CLCN6-208ENST00000494028 ZFYVE21Q9BQ24 234 aa10.06□□□□□ -0.8
CLCN6-208ENST00000494028 ROGDIQ9GZN7 287 aa10.06□□□□□ -0.8
CLCN6-208ENST00000494028 KLHL25Q9H0H3 589 aa10.06□□□□□ -0.8
CLCN6-208ENST00000494028 OR51I1Q9H343 314 aa10.06□□□□□ -0.8
CLCN6-208ENST00000494028 SEMA3GQ9NS98 782 aa10.06□□□□□ -0.8
CLCN6-208ENST00000494028 TUBA8Q9NY65 449 aaPredicted RBP10.06□□□□□ -0.8
CLCN6-208ENST00000494028 NDUFA13Q9P0J0 144 aa10.06□□□□□ -0.8
CLCN6-208ENST00000494028 PDP1Q9P0J1 537 aaPredicted RBP10.06□□□□□ -0.8
CLCN6-208ENST00000494028 KIF17Q9P2E2 1029 aa10.06□□□□□ -0.8
CLCN6-208ENST00000494028 P2RX2Q9UBL9 471 aa10.06□□□□□ -0.8
CLCN6-208ENST00000494028 PHF11Q9UIL8 331 aa10.06□□□□□ -0.8
CLCN6-208ENST00000494028 POMT2Q9UKY4 750 aa10.06□□□□□ -0.8
CLCN6-208ENST00000494028 BAG5Q9UL15 447 aa10.06□□□□□ -0.8
CLCN6-208ENST00000494028 RAB23Q9ULC3 237 aa10.06□□□□□ -0.8
CLCN6-208ENST00000494028 MRPS2Q9Y399 296 aaKnown RBP10.06□□□□□ -0.8
CLCN6-208ENST00000494028 TESMINQ9Y4I5 508 aa10.06□□□□□ -0.8
CLCN6-208ENST00000494028 A0A087WXM4 84 aa10.05□□□□□ -0.8
CLCN6-208ENST00000494028 OR5K3A6NET4 321 aa10.05□□□□□ -0.8
CLCN6-208ENST00000494028 C5orf58C9J3I9 102 aa10.05□□□□□ -0.8
CLCN6-208ENST00000494028 SLC16A6O15403 523 aa10.05□□□□□ -0.8
CLCN6-208ENST00000494028 PROM1O43490 865 aa10.05□□□□□ -0.8
CLCN6-208ENST00000494028 JRKO75564 520 aa10.05□□□□□ -0.8
CLCN6-208ENST00000494028 PDE9AO76083 593 aa10.05□□□□□ -0.8
CLCN6-208ENST00000494028 NME1P15531 152 aaKnown RBP10.05□□□□□ -0.8
CLCN6-208ENST00000494028 CSNK2A2P19784 350 aaPredicted RBP10.05□□□□□ -0.8
CLCN6-208ENST00000494028 CD27P26842 260 aa10.05□□□□□ -0.8
CLCN6-208ENST00000494028 MAGEA8P43361 318 aa10.05□□□□□ -0.8
CLCN6-208ENST00000494028 YAP1P46937 504 aaKnown RBP10.05□□□□□ -0.8
CLCN6-208ENST00000494028 LIMS1P48059 325 aa10.05□□□□□ -0.8
CLCN6-208ENST00000494028 RXRGP48443 463 aa10.05□□□□□ -0.8
CLCN6-208ENST00000494028 HLCSP50747 726 aa10.05□□□□□ -0.8
CLCN6-208ENST00000494028 STARD6P59095 220 aa10.05□□□□□ -0.8
CLCN6-208ENST00000494028 RELAQ04206 551 aa10.05□□□□□ -0.8
CLCN6-208ENST00000494028 CD47Q08722 323 aa10.05□□□□□ -0.8
CLCN6-208ENST00000494028 IL18R1Q13478 541 aa10.05□□□□□ -0.8
CLCN6-208ENST00000494028 C1orf61Q13536 156 aa10.05□□□□□ -0.8
CLCN6-208ENST00000494028 KEAP1Q14145 624 aa10.05□□□□□ -0.8
CLCN6-208ENST00000494028 SUZ12Q15022 739 aaKnown RBP10.05□□□□□ -0.8
CLCN6-208ENST00000494028 GPR19Q15760 415 aa10.05□□□□□ -0.8
CLCN6-208ENST00000494028 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.05□□□□□ -0.8
CLCN6-208ENST00000494028 FBXO42Q6P3S6 717 aa10.05□□□□□ -0.8
CLCN6-208ENST00000494028 THAP5Q7Z6K1 395 aa10.05□□□□□ -0.8
CLCN6-208ENST00000494028 GALNT5Q7Z7M9 940 aa10.05□□□□□ -0.8
CLCN6-208ENST00000494028 LGI4Q8N135 537 aa10.05□□□□□ -0.8
CLCN6-208ENST00000494028 SMYD1Q8NB12 490 aa10.05□□□□□ -0.8
CLCN6-208ENST00000494028 CAMKVQ8NCB2 501 aa10.05□□□□□ -0.8
CLCN6-208ENST00000494028 PIK3C3Q8NEB9 887 aa10.05□□□□□ -0.8
CLCN6-208ENST00000494028 OR56A1Q8NGH5 318 aa10.05□□□□□ -0.8
CLCN6-208ENST00000494028 OR5D16Q8NGK9 328 aa10.05□□□□□ -0.8
CLCN6-208ENST00000494028 OR9A2Q8NGT5 310 aa10.05□□□□□ -0.8
CLCN6-208ENST00000494028 MIPOL1Q8TD10 442 aa10.05□□□□□ -0.8
CLCN6-208ENST00000494028 ZDHHC1Q8WTX9 485 aa10.05□□□□□ -0.8
CLCN6-208ENST00000494028 SLC38A5Q8WUX1 472 aa10.05□□□□□ -0.8
CLCN6-208ENST00000494028 LZICQ8WZA0 190 aa10.05□□□□□ -0.8
CLCN6-208ENST00000494028 NCSTNQ92542 709 aa10.05□□□□□ -0.8
CLCN6-208ENST00000494028 HDAC2Q92769 488 aaKnown RBP10.05□□□□□ -0.8
CLCN6-208ENST00000494028 HLA-CQ95604 372 aa10.05□□□□□ -0.8
CLCN6-208ENST00000494028 MOAP1Q96BY2 351 aa10.05□□□□□ -0.8
CLCN6-208ENST00000494028 SERINC2Q96SA4 455 aa10.05□□□□□ -0.8
CLCN6-208ENST00000494028 ZNF347Q96SE7 839 aa10.05□□□□□ -0.8
CLCN6-208ENST00000494028 PSD2Q9BQI7 771 aa10.05□□□□□ -0.8
CLCN6-208ENST00000494028 RSPO3Q9BXY4 272 aaPredicted RBP10.05□□□□□ -0.8
CLCN6-208ENST00000494028 GABARAPL3Q9BY60 117 aa10.05□□□□□ -0.8
CLCN6-208ENST00000494028 YTHDF1Q9BYJ9 559 aaKnown RBP10.05□□□□□ -0.8
CLCN6-208ENST00000494028 PCED1AQ9H1Q7 454 aa10.05□□□□□ -0.8
CLCN6-208ENST00000494028 RIBC2Q9H4K1 309 aa10.05□□□□□ -0.8
CLCN6-208ENST00000494028 RUBCNLQ9H714 662 aa10.05□□□□□ -0.8
CLCN6-208ENST00000494028 TMEM74BQ9NUR3 256 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms