RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 SMU1Q2TAY7 513 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 SYTL3Q4VX76 610 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 MLIPQ5VWP3 458 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 ANKRD22Q5VYY1 191 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 PAOXQ6QHF9 649 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 FKBP9P1Q75LS8 142 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 ZNF767PQ75MW2 155 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 COX15Q7KZN9 410 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 PPP1R32Q7Z5V6 425 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 MRGPREQ86SM8 312 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 LINC00523Q86TU6 105 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 ZC3H7AQ8IWR0 971 aaKnown RBP7.75□□□□□ -1.17
HDAC6-234ENST00000493923 LILRA2Q8N149 483 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 SVOPQ8N4V2 548 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 NAT8LQ8N9F0 302 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 THAP4Q8WY91 577 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 TANKQ92844 425 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 ZUFSPQ96AP4 578 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 C19orf60Q96EN9 201 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 CIB1Q99828 191 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 P2RY12Q9H244 342 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 MUC13Q9H3R2 512 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 NECTIN3Q9NQS3 549 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 ACSS2Q9NR19 701 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 DCDC2Q9UHG0 476 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 RIMKLBQ9ULI2 386 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.75□□□□□ -1.17
HDAC6-234ENST00000493923 PCDHGB4Q9UN71 923 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 NOSIPQ9Y314 301 aaKnown RBP7.75□□□□□ -1.17
HDAC6-234ENST00000493923 PCDHGB5Q9Y5G0 923 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 MAU2Q9Y6X3 613 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 CELSR2Q9HCU4 2923 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 ARPC4-TTLL3A0A0A6YYG9 625 aa7.74□□□□□ -1.17
HDAC6-234ENST00000493923 A0A1W2PPV9 198 aa7.74□□□□□ -1.17
HDAC6-234ENST00000493923 TCRBV3S1A0A5B6 114 aa7.74□□□□□ -1.17
HDAC6-234ENST00000493923 MAGEB16A2A368 324 aa7.74□□□□□ -1.17
HDAC6-234ENST00000493923 BLACEA4D250 179 aa7.74□□□□□ -1.17
HDAC6-234ENST00000493923 ERI2A8K979 691 aaKnown RBP7.74□□□□□ -1.17
HDAC6-234ENST00000493923 CCRL2O00421 344 aa7.74□□□□□ -1.17
HDAC6-234ENST00000493923 ACOT8O14734 319 aa7.74□□□□□ -1.17
HDAC6-234ENST00000493923 CD3EAPO15446 510 aaKnown RBP7.74□□□□□ -1.17
HDAC6-234ENST00000493923 NIPSNAP2O75323 286 aa7.74□□□□□ -1.17
HDAC6-234ENST00000493923 SEMA7AO75326 666 aa7.74□□□□□ -1.17
HDAC6-234ENST00000493923 CCNKO75909 580 aa7.74□□□□□ -1.17
HDAC6-234ENST00000493923 OR2B3O76000 313 aa7.74□□□□□ -1.17
HDAC6-234ENST00000493923 NADKO95544 446 aaPredicted RBP7.74□□□□□ -1.17
HDAC6-234ENST00000493923 YES1P07947 543 aa7.74□□□□□ -1.17
HDAC6-234ENST00000493923 GSTM1P09488 218 aa7.74□□□□□ -1.17
HDAC6-234ENST00000493923 OR56A5P0C7T3 313 aa7.74□□□□□ -1.17
HDAC6-234ENST00000493923 KITP10721 976 aa7.74□□□□□ -1.17
HDAC6-234ENST00000493923 SSTR1P30872 391 aa7.74□□□□□ -1.17
HDAC6-234ENST00000493923 IDUAP35475 653 aa7.74□□□□□ -1.17
HDAC6-234ENST00000493923 CAPGP40121 348 aa7.74□□□□□ -1.17
HDAC6-234ENST00000493923 PGDP52209 483 aa7.74□□□□□ -1.17
HDAC6-234ENST00000493923 S100A12P80511 92 aa7.74□□□□□ -1.17
HDAC6-234ENST00000493923 EPS8Q12929 822 aa7.74□□□□□ -1.17
HDAC6-234ENST00000493923 TRIM25Q14258 630 aaKnown RBP7.74□□□□□ -1.17
HDAC6-234ENST00000493923 FASTKQ14296 549 aaKnown RBP7.74□□□□□ -1.17
HDAC6-234ENST00000493923 BBS9Q3SYG4 887 aa7.74□□□□□ -1.17
HDAC6-234ENST00000493923 SLC36A3Q495N2 470 aa7.74□□□□□ -1.17
HDAC6-234ENST00000493923 ZFP69Q49AA0 526 aa7.74□□□□□ -1.17
HDAC6-234ENST00000493923 FASTKD1Q53R41 847 aaKnown RBP7.74□□□□□ -1.17
HDAC6-234ENST00000493923 RHBDD2Q6NTF9 364 aa7.74□□□□□ -1.17
HDAC6-234ENST00000493923 MRPL14Q6P1L8 145 aaKnown RBP7.74□□□□□ -1.17
HDAC6-234ENST00000493923 EPGNQ6UW88 154 aa7.74□□□□□ -1.17
HDAC6-234ENST00000493923 SHISA6Q6ZSJ9 500 aa7.74□□□□□ -1.17
HDAC6-234ENST00000493923 PRSS48Q7RTY5 328 aa7.74□□□□□ -1.17
HDAC6-234ENST00000493923 SLC22A16Q86VW1 577 aa7.74□□□□□ -1.17
HDAC6-234ENST00000493923 MCATQ8IVS2 390 aaKnown RBP7.74□□□□□ -1.17
HDAC6-234ENST00000493923 TCAIMQ8N3R3 496 aa7.74□□□□□ -1.17
HDAC6-234ENST00000493923 DHRSXQ8N5I4 330 aa7.74□□□□□ -1.17
HDAC6-234ENST00000493923 METTL27Q8N6F8 245 aaPredicted RBP7.74□□□□□ -1.17
HDAC6-234ENST00000493923 NATD1Q8N6N6 113 aa7.74□□□□□ -1.17
HDAC6-234ENST00000493923 MRRFQ96E11 262 aaKnown RBP7.74□□□□□ -1.17
HDAC6-234ENST00000493923 MFSD3Q96ES6 412 aa7.74□□□□□ -1.17
HDAC6-234ENST00000493923 TCTN2Q96GX1 697 aa7.74□□□□□ -1.17
HDAC6-234ENST00000493923 DACH2Q96NX9 599 aa7.74□□□□□ -1.17
HDAC6-234ENST00000493923 PSMG3-AS1Q96PY0 264 aa7.74□□□□□ -1.17
HDAC6-234ENST00000493923 CDRT15Q96T59 188 aa7.74□□□□□ -1.17
HDAC6-234ENST00000493923 SLC30A3Q99726 388 aa7.74□□□□□ -1.17
HDAC6-234ENST00000493923 EBF4Q9BQW3 602 aa7.74□□□□□ -1.17
HDAC6-234ENST00000493923 CHID1Q9BWS9 393 aa7.74□□□□□ -1.17
HDAC6-234ENST00000493923 EPS8L2Q9H6S3 715 aa7.74□□□□□ -1.17
HDAC6-234ENST00000493923 WDR41Q9HAD4 459 aa7.74□□□□□ -1.17
HDAC6-234ENST00000493923 FANCEQ9HB96 536 aa7.74□□□□□ -1.17
HDAC6-234ENST00000493923 CATSPERZQ9NTU4 200 aa7.74□□□□□ -1.17
HDAC6-234ENST00000493923 PAK1IP1Q9NWT1 392 aaPredicted RBP7.74□□□□□ -1.17
HDAC6-234ENST00000493923 OR6C2Q9NZP2 312 aa7.74□□□□□ -1.17
HDAC6-234ENST00000493923 PAK5Q9P286 719 aa7.74□□□□□ -1.17
HDAC6-234ENST00000493923 VTI1BQ9UEU0 232 aa7.74□□□□□ -1.17
HDAC6-234ENST00000493923 MARCOQ9UEW3 520 aaPredicted RBP7.74□□□□□ -1.17
HDAC6-234ENST00000493923 SERTAD3Q9UJW9 196 aa7.74□□□□□ -1.17
HDAC6-234ENST00000493923 VPS4AQ9UN37 437 aa7.74□□□□□ -1.17
HDAC6-234ENST00000493923 PTRH2Q9Y3E5 179 aaKnown RBP7.74□□□□□ -1.17
HDAC6-234ENST00000493923 MAP4K5Q9Y4K4 846 aa7.74□□□□□ -1.17
HDAC6-234ENST00000493923 PCDHGA9Q9Y5G4 932 aaKnown RBP7.74□□□□□ -1.17
HDAC6-234ENST00000493923 CSAG2Q9Y5P2 127 aa7.74□□□□□ -1.17
HDAC6-234ENST00000493923 A3GALT2U3KPV4 340 aa7.74□□□□□ -1.17
HDAC6-234ENST00000493923 SCN3AQ9NY46 2000 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 LOC105369274A0A096LPK9 316 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms