RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 KLF8O95600 359 aaPredicted RBP13.09□□□□□ -0.31
VCP-207ENST00000493886 OPN1SWP03999 348 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 KRT20P35900 424 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 PCYT1AP49585 367 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 PRIM2P49643 509 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 PRDX1Q06830 199 aaKnown RBP13.09□□□□□ -0.31
VCP-207ENST00000493886 RBBP4Q09028 425 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 SCARB2Q14108 478 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 KRT33BQ14525 404 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 SF3B4Q15427 424 aaKnown RBP eCLIP13.09□□□□□ -0.314e-7■■■■□ 25.3
VCP-207ENST00000493886 FAM180BQ6P0A1 224 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 PLD3Q8IV08 490 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 TMEM121BQ9BXQ6 578 aaPredicted RBP13.09□□□□□ -0.31
VCP-207ENST00000493886 FBRSQ9HAH7 460 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 HMG20AQ9NP66 347 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 KRT84Q9NSB2 600 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 WBP11Q9Y2W2 641 aaKnown RBP13.09□□□□□ -0.31
VCP-207ENST00000493886 PMF1-BGLAPU3KQ54 211 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 CACNB4O00305 520 aaPredicted RBP13.09□□□□□ -0.31
VCP-207ENST00000493886 SCAMP1O15126 338 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 NDUFS4O43181 175 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 KRT75O95678 551 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 BMP4P12644 408 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 PKLRP30613 574 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 PPP2CBP62714 309 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 PPP2CAP67775 309 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 TOP3AQ13472 1001 aaPredicted RBP13.09□□□□□ -0.31
VCP-207ENST00000493886 CCDC71Q8IV32 467 aaPredicted RBP13.09□□□□□ -0.31
VCP-207ENST00000493886 OR2A1Q8NGT9 310 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 NFKBIDQ8NI38 313 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 QRFPRQ96P65 431 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 TMEM38AQ9H6F2 299 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 REEP1Q9H902 201 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 LHX9Q9NQ69 397 aa13.09□□□□□ -0.31
VCP-207ENST00000493886 IGKV1-8A0A0C4DH67 115 aa13.08□□□□□ -0.32
VCP-207ENST00000493886 HAT1O14929 419 aa13.08□□□□□ -0.32
VCP-207ENST00000493886 ZW10O43264 779 aa13.08□□□□□ -0.32
VCP-207ENST00000493886 GABARAPO95166 117 aa13.08□□□□□ -0.32
VCP-207ENST00000493886 ITGAMP11215 1152 aa13.08□□□□□ -0.32
VCP-207ENST00000493886 ALDH9A1P49189 494 aa13.08□□□□□ -0.32
VCP-207ENST00000493886 SELENOWP63302 87 aa13.08□□□□□ -0.32
VCP-207ENST00000493886 SLC35A2P78381 396 aa13.08□□□□□ -0.32
VCP-207ENST00000493886 HTR4Q13639 388 aa13.08□□□□□ -0.32
VCP-207ENST00000493886 ZNF846Q147U1 533 aa13.08□□□□□ -0.32
VCP-207ENST00000493886 CARTPTQ16568 116 aa13.08□□□□□ -0.32
VCP-207ENST00000493886 UAP1L1Q3KQV9 507 aa13.08□□□□□ -0.32
VCP-207ENST00000493886 CYP27C1Q4G0S4 372 aa13.08□□□□□ -0.32
VCP-207ENST00000493886 C4orf46Q504U0 113 aa13.08□□□□□ -0.32
VCP-207ENST00000493886 C6orf132Q5T0Z8 1188 aa13.08□□□□□ -0.32
VCP-207ENST00000493886 KDM4DQ6B0I6 523 aa13.08□□□□□ -0.32
VCP-207ENST00000493886 NIPAL1Q6NVV3 410 aa13.08□□□□□ -0.32
VCP-207ENST00000493886 USP43Q70EL4 1123 aa13.08□□□□□ -0.32
VCP-207ENST00000493886 OR2L8Q8NGY9 312 aa13.08□□□□□ -0.32
VCP-207ENST00000493886 RGMAQ96B86 450 aa13.08□□□□□ -0.32
VCP-207ENST00000493886 RAB11FIP5Q9BXF6 653 aa13.08□□□□□ -0.32
VCP-207ENST00000493886 SACM1LQ9NTJ5 587 aa13.08□□□□□ -0.32
VCP-207ENST00000493886 UNC80Q8N2C7 3258 aa13.08□□□□□ -0.32
VCP-207ENST00000493886 M0R129 80 aa13.08□□□□□ -0.32
VCP-207ENST00000493886 CRYZL1O95825 349 aa13.08□□□□□ -0.32
VCP-207ENST00000493886 VIPP01282 170 aa13.08□□□□□ -0.32
VCP-207ENST00000493886 UQCRC2P22695 453 aa13.08□□□□□ -0.32
VCP-207ENST00000493886 RYKP34925 604 aa13.08□□□□□ -0.32
VCP-207ENST00000493886 B2MP61769 119 aa13.08□□□□□ -0.32
VCP-207ENST00000493886 HEPACAMQ14CZ8 416 aa13.08□□□□□ -0.32
VCP-207ENST00000493886 CDONQ4KMG0 1287 aa13.08□□□□□ -0.32
VCP-207ENST00000493886 FAM124AQ86V42 546 aa13.08□□□□□ -0.32
VCP-207ENST00000493886 NUDT13Q86X67 352 aa13.08□□□□□ -0.32
VCP-207ENST00000493886 PSD4Q8NDX1 1056 aa13.08□□□□□ -0.32
VCP-207ENST00000493886 OR52E1Q8NGJ3 308 aa13.08□□□□□ -0.32
VCP-207ENST00000493886 KCNC2Q96PR1 638 aa13.08□□□□□ -0.32
VCP-207ENST00000493886 ABCG4Q9H172 646 aa13.08□□□□□ -0.32
VCP-207ENST00000493886 EPS8L2Q9H6S3 715 aa13.08□□□□□ -0.32
VCP-207ENST00000493886 MVB12BQ9H7P6 319 aa13.08□□□□□ -0.32
VCP-207ENST00000493886 CXorf36Q9H7Y0 433 aa13.08□□□□□ -0.32
VCP-207ENST00000493886 FGF22Q9HCT0 170 aa13.08□□□□□ -0.32
VCP-207ENST00000493886 UCKL1Q9NWZ5 548 aa13.08□□□□□ -0.32
VCP-207ENST00000493886 THUMPD1Q9NXG2 353 aaKnown RBP13.08□□□□□ -0.32
VCP-207ENST00000493886 SCN3BQ9NY72 215 aa13.08□□□□□ -0.32
VCP-207ENST00000493886 SCHIP1Q9P0W5 487 aaPredicted RBP13.08□□□□□ -0.32
VCP-207ENST00000493886 PADI2Q9Y2J8 665 aa13.08□□□□□ -0.32
VCP-207ENST00000493886 NAALAD2Q9Y3Q0 740 aa13.08□□□□□ -0.32
VCP-207ENST00000493886 SNX8Q9Y5X2 465 aa13.08□□□□□ -0.32
VCP-207ENST00000493886 DPM1O60762 260 aa13.07□□□□□ -0.32
VCP-207ENST00000493886 TBX19O60806 448 aa13.07□□□□□ -0.32
VCP-207ENST00000493886 NUDT6P53370 316 aa13.07□□□□□ -0.32
VCP-207ENST00000493886 CDK6Q00534 326 aa13.07□□□□□ -0.32
VCP-207ENST00000493886 EEF1A2Q05639 463 aaKnown RBP13.07□□□□□ -0.32
VCP-207ENST00000493886 IL18R1Q13478 541 aa13.07□□□□□ -0.32
VCP-207ENST00000493886 UBE3DQ7Z6J8 389 aa13.07□□□□□ -0.32
VCP-207ENST00000493886 SETD9Q8NE22 299 aa13.07□□□□□ -0.32
VCP-207ENST00000493886 FLCNQ8NFG4 579 aa13.07□□□□□ -0.32
VCP-207ENST00000493886 OR52J3Q8NH60 311 aa13.07□□□□□ -0.32
VCP-207ENST00000493886 SPPL2AQ8TCT8 520 aa13.07□□□□□ -0.32
VCP-207ENST00000493886 SIPA1Q96FS4 1042 aa13.07□□□□□ -0.32
VCP-207ENST00000493886 NLNQ9BYT8 704 aa13.07□□□□□ -0.32
VCP-207ENST00000493886 RUBCNLQ9H714 662 aa13.07□□□□□ -0.32
VCP-207ENST00000493886 SLAMF7Q9NQ25 335 aa13.07□□□□□ -0.32
VCP-207ENST00000493886 AKIP1Q9NQ31 210 aa13.07□□□□□ -0.32
VCP-207ENST00000493886 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.07□□□□□ -0.32
VCP-207ENST00000493886 TPRKBQ9Y3C4 175 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms