RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 ESX1Q8N693 406 aa18.18■□□□□ 0.5
USP39-218ENST00000493829 OR4A15Q8NGL6 344 aa18.18■□□□□ 0.5
USP39-218ENST00000493829 SPSB2Q99619 263 aa18.18■□□□□ 0.5
USP39-218ENST00000493829 NRSN2Q9GZP1 204 aa18.18■□□□□ 0.5
USP39-218ENST00000493829 PRDM9Q9NQV7 894 aa18.18■□□□□ 0.5
USP39-218ENST00000493829 LEF1Q9UJU2 399 aaPredicted RBP18.18■□□□□ 0.5
USP39-218ENST00000493829 CROTQ9UKG9 612 aa18.18■□□□□ 0.5
USP39-218ENST00000493829 PCDHGA7Q9Y5G6 932 aa18.18■□□□□ 0.5
USP39-218ENST00000493829 CROCCQ5TZA2 2017 aa18.18■□□□□ 0.5
USP39-218ENST00000493829 BLACEA4D250 179 aa18.18■□□□□ 0.5
USP39-218ENST00000493829 TRABD2BA6NFA1 517 aa18.18■□□□□ 0.5
USP39-218ENST00000493829 CTNSO60931 367 aa18.18■□□□□ 0.5
USP39-218ENST00000493829 ONECUT2O95948 504 aa18.18■□□□□ 0.5
USP39-218ENST00000493829 GSNP06396 782 aa18.18■□□□□ 0.5
USP39-218ENST00000493829 HEXBP07686 556 aa18.18■□□□□ 0.5
USP39-218ENST00000493829 CPMP14384 443 aa18.18■□□□□ 0.5
USP39-218ENST00000493829 DDX5P17844 614 aaKnown RBP18.18■□□□□ 0.5
USP39-218ENST00000493829 CSNK2A2P19784 350 aaPredicted RBP18.18■□□□□ 0.5
USP39-218ENST00000493829 TCN2P20062 427 aa18.18■□□□□ 0.5
USP39-218ENST00000493829 IL10P22301 178 aa18.18■□□□□ 0.5
USP39-218ENST00000493829 CDKN2CP42773 168 aa18.18■□□□□ 0.5
USP39-218ENST00000493829 HSD17B7P56937 341 aa18.18■□□□□ 0.5
USP39-218ENST00000493829 RPS18P62269 152 aaKnown RBP18.18■□□□□ 0.5
USP39-218ENST00000493829 TLR1Q15399 786 aa18.18■□□□□ 0.5
USP39-218ENST00000493829 ANXA8L1Q5VT79 327 aa18.18■□□□□ 0.5
USP39-218ENST00000493829 ZNF517Q6ZMY9 492 aaPredicted RBP18.18■□□□□ 0.5
USP39-218ENST00000493829 LRRC25Q8N386 305 aaPredicted RBP18.18■□□□□ 0.5
USP39-218ENST00000493829 ADCY4Q8NFM4 1077 aa18.18■□□□□ 0.5
USP39-218ENST00000493829 OR9A2Q8NGT5 310 aa18.18■□□□□ 0.5
USP39-218ENST00000493829 PPWD1Q96BP3 646 aaKnown RBP18.18■□□□□ 0.5
USP39-218ENST00000493829 NXPE2Q96DL1 559 aa18.18■□□□□ 0.5
USP39-218ENST00000493829 ZNF764Q96H86 408 aaPredicted RBP18.18■□□□□ 0.5
USP39-218ENST00000493829 NSL1Q96IY1 281 aa18.18■□□□□ 0.5
USP39-218ENST00000493829 ZNF681Q96N22 645 aa18.18■□□□□ 0.5
USP39-218ENST00000493829 MESP1Q9BRJ9 268 aa18.18■□□□□ 0.5
USP39-218ENST00000493829 CRB3Q9BUF7 120 aa18.18■□□□□ 0.5
USP39-218ENST00000493829 TGIF2Q9GZN2 237 aa18.18■□□□□ 0.5
USP39-218ENST00000493829 GLIPR2Q9H4G4 154 aa18.18■□□□□ 0.5
USP39-218ENST00000493829 RMND5AQ9H871 391 aa18.18■□□□□ 0.5
USP39-218ENST00000493829 TAS2R7Q9NYW3 318 aa18.18■□□□□ 0.5
USP39-218ENST00000493829 PTRH2Q9Y3E5 179 aaKnown RBP18.18■□□□□ 0.5
USP39-218ENST00000493829 KNTC1P50748 2209 aa18.17■□□□□ 0.5
USP39-218ENST00000493829 ERICH4A6NGS2 130 aa18.17■□□□□ 0.5
USP39-218ENST00000493829 VSTM2BA6NLU5 285 aa18.17■□□□□ 0.5
USP39-218ENST00000493829 IDSB3KWA1 339 aa18.17■□□□□ 0.5
USP39-218ENST00000493829 OR10H2O60403 315 aa18.17■□□□□ 0.5
USP39-218ENST00000493829 T-ENOLP0DO92 83 aa18.17■□□□□ 0.5
USP39-218ENST00000493829 SOAT1P35610 550 aa18.17■□□□□ 0.5
USP39-218ENST00000493829 MANFP55145 182 aaKnown RBP18.17■□□□□ 0.5
USP39-218ENST00000493829 PCBP4P57723 403 aaKnown RBP18.17■□□□□ 0.5
USP39-218ENST00000493829 MXRA7P84157 204 aa18.17■□□□□ 0.5
USP39-218ENST00000493829 NFYCQ13952 458 aa18.17■□□□□ 0.5
USP39-218ENST00000493829 SPRED3Q2MJR0 410 aa18.17■□□□□ 0.5
USP39-218ENST00000493829 QSOX2Q6ZRP7 698 aa18.17■□□□□ 0.5
USP39-218ENST00000493829 LANCL3Q6ZV70 420 aa18.17■□□□□ 0.5
USP39-218ENST00000493829 CLEC4FQ8N1N0 589 aa18.17■□□□□ 0.5
USP39-218ENST00000493829 FBXO27Q8NI29 283 aa18.17■□□□□ 0.5
USP39-218ENST00000493829 SUN3Q8TAQ9 357 aa18.17■□□□□ 0.5
USP39-218ENST00000493829 ZBED6CLQ96FA7 236 aaPredicted RBP18.17■□□□□ 0.5
USP39-218ENST00000493829 ITCHQ96J02 903 aa18.17■□□□□ 0.5
USP39-218ENST00000493829 AMDHD1Q96NU7 426 aa18.17■□□□□ 0.5
USP39-218ENST00000493829 PANX1Q96RD7 426 aa18.17■□□□□ 0.5
USP39-218ENST00000493829 ALOXE3Q9BYJ1 711 aa18.17■□□□□ 0.5
USP39-218ENST00000493829 SLC26A1Q9H2B4 701 aa18.17■□□□□ 0.5
USP39-218ENST00000493829 SERHLQ9NQF3 203 aa18.17■□□□□ 0.5
USP39-218ENST00000493829 THSD1Q9NS62 852 aa18.17■□□□□ 0.5
USP39-218ENST00000493829 SLAMF8Q9P0V8 285 aa18.17■□□□□ 0.5
USP39-218ENST00000493829 C3orf18Q9UK00 162 aa18.17■□□□□ 0.5
USP39-218ENST00000493829 MMACHCQ9Y4U1 282 aa18.17■□□□□ 0.5
USP39-218ENST00000493829 CLDN16Q9Y5I7 305 aa18.17■□□□□ 0.5
USP39-218ENST00000493829 SNX8Q9Y5X2 465 aa18.17■□□□□ 0.5
USP39-218ENST00000493829 PRSS51A0A1B0GVH4 220 aa18.16■□□□□ 0.5
USP39-218ENST00000493829 BBIP1A8MTZ0 92 aa18.16■□□□□ 0.5
USP39-218ENST00000493829 A8MUA0 341 aa18.16■□□□□ 0.5
USP39-218ENST00000493829 MYO1GB0I1T2 1018 aa18.16■□□□□ 0.5
USP39-218ENST00000493829 RNASET2O00584 256 aaKnown RBP18.16■□□□□ 0.5
USP39-218ENST00000493829 RFXANKO14593 260 aa18.16■□□□□ 0.5
USP39-218ENST00000493829 SCN2BO60939 215 aa18.16■□□□□ 0.5
USP39-218ENST00000493829 RECKO95980 971 aa18.16■□□□□ 0.5
USP39-218ENST00000493829 ALBP02768 609 aa18.16■□□□□ 0.5
USP39-218ENST00000493829 IFNA16P05015 189 aa18.16■□□□□ 0.5
USP39-218ENST00000493829 PORP16435 677 aaPredicted RBP18.16■□□□□ 0.5
USP39-218ENST00000493829 NT5EP21589 574 aa18.16■□□□□ 0.5
USP39-218ENST00000493829 GPC1P35052 558 aa18.16■□□□□ 0.5
USP39-218ENST00000493829 STAT5AP42229 794 aa18.16■□□□□ 0.5
USP39-218ENST00000493829 CDK9P50750 372 aaKnown RBP18.16■□□□□ 0.5
USP39-218ENST00000493829 STX5Q13190 355 aa18.16■□□□□ 0.5
USP39-218ENST00000493829 CAPRIN1Q14444 709 aaKnown RBP18.16■□□□□ 0.5
USP39-218ENST00000493829 TGIF1Q15583 401 aa18.16■□□□□ 0.5
USP39-218ENST00000493829 NSDHLQ15738 373 aa18.16■□□□□ 0.5
USP39-218ENST00000493829 GTDC1Q4AE62 458 aa18.16■□□□□ 0.5
USP39-218ENST00000493829 DGAT2L6Q6ZPD8 337 aa18.16■□□□□ 0.5
USP39-218ENST00000493829 CCDC121Q6ZUS5 278 aa18.16■□□□□ 0.5
USP39-218ENST00000493829 SZRD1Q7Z422 152 aa18.16■□□□□ 0.5
USP39-218ENST00000493829 DHDDSQ86SQ9 333 aa18.16■□□□□ 0.5
USP39-218ENST00000493829 VPS37AQ8NEZ2 397 aa18.16■□□□□ 0.5
USP39-218ENST00000493829 GTF2H4Q92759 462 aa18.16■□□□□ 0.5
USP39-218ENST00000493829 SLC39A3Q9BRY0 314 aa18.16■□□□□ 0.5
USP39-218ENST00000493829 B3GNT4Q9C0J1 378 aa18.16■□□□□ 0.5
USP39-218ENST00000493829 PNO1Q9NRX1 252 aaKnown RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms