RNA–Protein interactions for RNA: ENST00000493796.5

CD46-217, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-217ENST00000493796 LINC00301Q8NCQ3 95 aa3□□□□□ -1.93
CD46-217ENST00000493796 OR4D10Q8NGI6 311 aa3□□□□□ -1.93
CD46-217ENST00000493796 CHPT1Q8WUD6 406 aa3□□□□□ -1.93
CD46-217ENST00000493796 C8orf76Q96K31 380 aa3□□□□□ -1.93
CD46-217ENST00000493796 BTBD9Q96Q07 612 aa3□□□□□ -1.93
CD46-217ENST00000493796 PARK7Q99497 189 aaKnown RBP3□□□□□ -1.93
CD46-217ENST00000493796 HSD17B14Q9BPX1 270 aa3□□□□□ -1.93
CD46-217ENST00000493796 LLPHQ9BRT6 129 aaKnown RBP3□□□□□ -1.93
CD46-217ENST00000493796 PI4K2AQ9BTU6 479 aa3□□□□□ -1.93
CD46-217ENST00000493796 TRPV6Q9H1D0 765 aa3□□□□□ -1.93
CD46-217ENST00000493796 PARLQ9H300 379 aa3□□□□□ -1.93
CD46-217ENST00000493796 MINDY3Q9H8M7 445 aa3□□□□□ -1.93
CD46-217ENST00000493796 GNB4Q9HAV0 340 aa3□□□□□ -1.93
CD46-217ENST00000493796 ZCCHC17Q9NP64 241 aaKnown RBP3□□□□□ -1.93
CD46-217ENST00000493796 XPNPEP1Q9NQW7 623 aa3□□□□□ -1.93
CD46-217ENST00000493796 SH3GLB2Q9NR46 395 aa3□□□□□ -1.93
CD46-217ENST00000493796 RBM28Q9NW13 759 aaKnown RBP3□□□□□ -1.93
CD46-217ENST00000493796 CTSZQ9UBR2 303 aa3□□□□□ -1.93
CD46-217ENST00000493796 ISY1Q9ULR0 285 aaKnown RBP3□□□□□ -1.93
CD46-217ENST00000493796 ZNF510Q9Y2H8 683 aa3□□□□□ -1.93
CD46-217ENST00000493796 TANC1Q9C0D5 1861 aa3□□□□□ -1.93
CD46-217ENST00000493796 PLXNA4Q9HCM2 1894 aa3□□□□□ -1.93
CD46-217ENST00000493796 USP34Q70CQ2 3546 aa3□□□□□ -1.93
CD46-217ENST00000493796 SCN1AP35498 2009 aa3□□□□□ -1.93
CD46-217ENST00000493796 MYO7AQ13402 2215 aa3□□□□□ -1.93
CD46-217ENST00000493796 VWA8A3KMH1 1905 aa2.99□□□□□ -1.93
CD46-217ENST00000493796 IGHV4-30-2A0A087WSY4 118 aa2.99□□□□□ -1.93
CD46-217ENST00000493796 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.99□□□□□ -1.93
CD46-217ENST00000493796 A0A1B0GVL5 298 aa2.99□□□□□ -1.93
CD46-217ENST00000493796 VPS37CA5D8V6 355 aaPredicted RBP2.99□□□□□ -1.93
CD46-217ENST00000493796 A8MXK9 166 aa2.99□□□□□ -1.93
CD46-217ENST00000493796 E9PMD0 336 aa2.99□□□□□ -1.93
CD46-217ENST00000493796 SLC1A7O00341 560 aa2.99□□□□□ -1.93
CD46-217ENST00000493796 GGPS1O95749 300 aa2.99□□□□□ -1.93
CD46-217ENST00000493796 SLC25A27O95847 323 aa2.99□□□□□ -1.93
CD46-217ENST00000493796 SERPING1P05155 500 aa2.99□□□□□ -1.93
CD46-217ENST00000493796 FYNP06241 537 aa2.99□□□□□ -1.93
CD46-217ENST00000493796 POLR2MP0CAP2 368 aa2.99□□□□□ -1.93
CD46-217ENST00000493796 CALM1P0DP23 149 aa2.99□□□□□ -1.93
CD46-217ENST00000493796 CALM2P0DP24 149 aa2.99□□□□□ -1.93
CD46-217ENST00000493796 CALM3P0DP25 149 aa2.99□□□□□ -1.93
CD46-217ENST00000493796 HSD17B3P37058 310 aa2.99□□□□□ -1.93
CD46-217ENST00000493796 RAD52P43351 418 aa2.99□□□□□ -1.93
CD46-217ENST00000493796 NDUFA8P51970 172 aa2.99□□□□□ -1.93
CD46-217ENST00000493796 OR1D5P58170 312 aa2.99□□□□□ -1.93
CD46-217ENST00000493796 DHODHQ02127 395 aa2.99□□□□□ -1.93
CD46-217ENST00000493796 SP4Q02446 784 aa2.99□□□□□ -1.93
CD46-217ENST00000493796 ZNF177Q13360 481 aaPredicted RBP2.99□□□□□ -1.93
CD46-217ENST00000493796 CEP55Q53EZ4 464 aa2.99□□□□□ -1.93
CD46-217ENST00000493796 LACTB2Q53H82 288 aaPredicted RBP2.99□□□□□ -1.93
CD46-217ENST00000493796 CELF3Q5SZQ8 465 aaKnown RBP2.99□□□□□ -1.93
CD46-217ENST00000493796 OR4C11Q6IEV9 310 aa2.99□□□□□ -1.93
CD46-217ENST00000493796 CXCL17Q6UXB2 119 aa2.99□□□□□ -1.93
CD46-217ENST00000493796 SLC47A2Q86VL8 602 aa2.99□□□□□ -1.93
CD46-217ENST00000493796 FAM131BQ86XD5 332 aa2.99□□□□□ -1.93
CD46-217ENST00000493796 PLA2G4DQ86XP0 818 aa2.99□□□□□ -1.93
CD46-217ENST00000493796 CATSPER3Q86XQ3 398 aa2.99□□□□□ -1.93
CD46-217ENST00000493796 ABHD12Q8N2K0 398 aa2.99□□□□□ -1.93
CD46-217ENST00000493796 LINC00612Q8N6U2 182 aa2.99□□□□□ -1.93
CD46-217ENST00000493796 DNAJC19Q96DA6 116 aa2.99□□□□□ -1.93
CD46-217ENST00000493796 PDLIM5Q96HC4 596 aaKnown RBP2.99□□□□□ -1.93
CD46-217ENST00000493796 DEFB118Q96PH6 123 aa2.99□□□□□ -1.93
CD46-217ENST00000493796 NDNQ99608 321 aa2.99□□□□□ -1.93
CD46-217ENST00000493796 LZTS2Q9BRK4 669 aa2.99□□□□□ -1.93
CD46-217ENST00000493796 DNAI2Q9GZS0 605 aa2.99□□□□□ -1.93
CD46-217ENST00000493796 HSD3B7Q9H2F3 369 aa2.99□□□□□ -1.93
CD46-217ENST00000493796 GPN1Q9HCN4 374 aaPredicted RBP2.99□□□□□ -1.93
CD46-217ENST00000493796 XAB2Q9HCS7 855 aaKnown RBP2.99□□□□□ -1.93
CD46-217ENST00000493796 ANKEF1Q9NU02 776 aa2.99□□□□□ -1.93
CD46-217ENST00000493796 TBC1D13Q9NVG8 400 aa2.99□□□□□ -1.93
CD46-217ENST00000493796 HACD3Q9P035 362 aa2.99□□□□□ -1.93
CD46-217ENST00000493796 THAP10Q9P2Z0 257 aaPredicted RBP2.99□□□□□ -1.93
CD46-217ENST00000493796 SMC3Q9UQE7 1217 aa2.99□□□□□ -1.93
CD46-217ENST00000493796 MRPL11Q9Y3B7 192 aaKnown RBP2.99□□□□□ -1.93
CD46-217ENST00000493796 WDR87Q6ZQQ6 2873 aa2.99□□□□□ -1.93
CD46-217ENST00000493796 PDE4DIPQ5VU43 2346 aa2.99□□□□□ -1.93
CD46-217ENST00000493796 FRYLO94915 3013 aa2.98□□□□□ -1.93
CD46-217ENST00000493796 VPS13AQ96RL7 3174 aa2.98□□□□□ -1.93
CD46-217ENST00000493796 ZNF638Q14966 1978 aaKnown RBP2.98□□□□□ -1.93
CD46-217ENST00000493796 ERICH2A1L162 156 aa2.98□□□□□ -1.93
CD46-217ENST00000493796 URADA6NGE7 173 aa2.98□□□□□ -1.93
CD46-217ENST00000493796 ACOD1A6NK06 481 aa2.98□□□□□ -1.93
CD46-217ENST00000493796 SRRM5B3KS81 715 aa2.98□□□□□ -1.93
CD46-217ENST00000493796 UBE2CO00762 179 aa2.98□□□□□ -1.93
CD46-217ENST00000493796 TLX2O43763 284 aaPredicted RBP2.98□□□□□ -1.93
CD46-217ENST00000493796 SNAP91O60641 907 aa2.98□□□□□ -1.93
CD46-217ENST00000493796 NXPH4O95158 308 aa2.98□□□□□ -1.93
CD46-217ENST00000493796 CHRNA1P02708 482 aa2.98□□□□□ -1.93
CD46-217ENST00000493796 ASGR1P07306 291 aa2.98□□□□□ -1.93
CD46-217ENST00000493796 KIF5BP33176 963 aa2.98□□□□□ -1.93
CD46-217ENST00000493796 CAPGP40121 348 aa2.98□□□□□ -1.93
CD46-217ENST00000493796 PPP5CP53041 499 aa2.98□□□□□ -1.93
CD46-217ENST00000493796 LIMK2P53671 638 aa2.98□□□□□ -1.93
CD46-217ENST00000493796 MAP2K1Q02750 393 aaPredicted RBP2.98□□□□□ -1.93
CD46-217ENST00000493796 CACNG1Q06432 222 aa2.98□□□□□ -1.93
CD46-217ENST00000493796 KARSQ15046 597 aaKnown RBP2.98□□□□□ -1.93
CD46-217ENST00000493796 KYNUQ16719 465 aa2.98□□□□□ -1.93
CD46-217ENST00000493796 KRT80Q6KB66 452 aa2.98□□□□□ -1.93
CD46-217ENST00000493796 SLC39A4Q6P5W5 647 aa2.98□□□□□ -1.93
CD46-217ENST00000493796 CYB5D1Q6P9G0 228 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms