RNA–Protein interactions for RNA: ENST00000491791.1

USP4-214, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 821 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-214ENST00000491791 MUL1Q969V5 352 aa10.17□□□□□ -0.78
USP4-214ENST00000491791 TPD52L3Q96J77 140 aa10.17□□□□□ -0.78
USP4-214ENST00000491791 MPP4Q96JB8 637 aa10.17□□□□□ -0.78
USP4-214ENST00000491791 MYOCQ99972 504 aa10.17□□□□□ -0.78
USP4-214ENST00000491791 ROGDIQ9GZN7 287 aa10.17□□□□□ -0.78
USP4-214ENST00000491791 XKR8Q9H6D3 395 aa10.17□□□□□ -0.78
USP4-214ENST00000491791 GPN2Q9H9Y4 310 aaPredicted RBP10.17□□□□□ -0.78
USP4-214ENST00000491791 KRT84Q9NSB2 600 aa10.17□□□□□ -0.78
USP4-214ENST00000491791 ACER3Q9NUN7 267 aa10.17□□□□□ -0.78
USP4-214ENST00000491791 EXD2Q9NVH0 621 aa10.17□□□□□ -0.78
USP4-214ENST00000491791 TEX10Q9NXF1 929 aaPredicted RBP10.17□□□□□ -0.78
USP4-214ENST00000491791 ZNF624Q9P2J8 865 aaPredicted RBP10.17□□□□□ -0.78
USP4-214ENST00000491791 TBC1D29Q9UFV1 150 aa10.17□□□□□ -0.78
USP4-214ENST00000491791 ACAD8Q9UKU7 415 aa10.17□□□□□ -0.78
USP4-214ENST00000491791 POFUT2Q9Y2G5 429 aa10.17□□□□□ -0.78
USP4-214ENST00000491791 TPRKBQ9Y3C4 175 aa10.17□□□□□ -0.78
USP4-214ENST00000491791 MAP4K5Q9Y4K4 846 aa10.17□□□□□ -0.78
USP4-214ENST00000491791 R4GN57 208 aa10.17□□□□□ -0.78
USP4-214ENST00000491791 NUP214P35658 2090 aaPredicted RBP10.16□□□□□ -0.78
USP4-214ENST00000491791 HEATR5BQ9P2D3 2071 aa10.16□□□□□ -0.78
USP4-214ENST00000491791 PLXND1Q9Y4D7 1925 aa10.16□□□□□ -0.78
USP4-214ENST00000491791 OR5K4A6NMS3 321 aa10.16□□□□□ -0.78
USP4-214ENST00000491791 SLC31A1O15431 190 aa10.16□□□□□ -0.78
USP4-214ENST00000491791 PROM1O43490 865 aa10.16□□□□□ -0.78
USP4-214ENST00000491791 ASNA1O43681 348 aa10.16□□□□□ -0.78
USP4-214ENST00000491791 SP9P0CG40 484 aa10.16□□□□□ -0.78
USP4-214ENST00000491791 ACADMP11310 421 aa10.16□□□□□ -0.78
USP4-214ENST00000491791 ETS2P15036 469 aa10.16□□□□□ -0.78
USP4-214ENST00000491791 NDUFV2P19404 249 aa10.16□□□□□ -0.78
USP4-214ENST00000491791 PCSK6P29122 969 aa10.16□□□□□ -0.78
USP4-214ENST00000491791 RRM2P31350 389 aa10.16□□□□□ -0.78
USP4-214ENST00000491791 AKT2P31751 481 aa10.16□□□□□ -0.78
USP4-214ENST00000491791 SSR2P43308 183 aa10.16□□□□□ -0.78
USP4-214ENST00000491791 KCNJ5P48544 419 aa10.16□□□□□ -0.78
USP4-214ENST00000491791 CCT3P49368 545 aaKnown RBP10.16□□□□□ -0.78
USP4-214ENST00000491791 ANXA11P50995 505 aaKnown RBP10.16□□□□□ -0.78
USP4-214ENST00000491791 CYP4F2P78329 520 aa10.16□□□□□ -0.78
USP4-214ENST00000491791 MVKQ03426 396 aa10.16□□□□□ -0.78
USP4-214ENST00000491791 GNA13Q14344 377 aa10.16□□□□□ -0.78
USP4-214ENST00000491791 LRRC32Q14392 662 aa10.16□□□□□ -0.78
USP4-214ENST00000491791 MANEAQ5SRI9 462 aa10.16□□□□□ -0.78
USP4-214ENST00000491791 ENPP7Q6UWV6 458 aa10.16□□□□□ -0.78
USP4-214ENST00000491791 TMEM92Q6UXU6 159 aa10.16□□□□□ -0.78
USP4-214ENST00000491791 LINC00299Q6ZSB3 139 aa10.16□□□□□ -0.78
USP4-214ENST00000491791 DGLUCYQ7Z3D6 616 aa10.16□□□□□ -0.78
USP4-214ENST00000491791 GALNT10Q86SR1 603 aa10.16□□□□□ -0.78
USP4-214ENST00000491791 CLVS1Q8IUQ0 354 aaPredicted RBP10.16□□□□□ -0.78
USP4-214ENST00000491791 SAMD14Q8IZD0 417 aaPredicted RBP10.16□□□□□ -0.78
USP4-214ENST00000491791 HORMAD2Q8N7B1 307 aa10.16□□□□□ -0.78
USP4-214ENST00000491791 AMER3Q8N944 861 aa10.16□□□□□ -0.78
USP4-214ENST00000491791 ACOT4Q8N9L9 421 aa10.16□□□□□ -0.78
USP4-214ENST00000491791 GPBAR1Q8TDU6 330 aa10.16□□□□□ -0.78
USP4-214ENST00000491791 LCN9Q8WX39 176 aa10.16□□□□□ -0.78
USP4-214ENST00000491791 GAL3ST3Q96A11 431 aa10.16□□□□□ -0.78
USP4-214ENST00000491791 ZNF681Q96N22 645 aa10.16□□□□□ -0.78
USP4-214ENST00000491791 BTBD2Q9BX70 525 aa10.16□□□□□ -0.78
USP4-214ENST00000491791 ABCG4Q9H172 646 aa10.16□□□□□ -0.78
USP4-214ENST00000491791 SLC6A17Q9H1V8 727 aa10.16□□□□□ -0.78
USP4-214ENST00000491791 GLIPR2Q9H4G4 154 aa10.16□□□□□ -0.78
USP4-214ENST00000491791 KLHL31Q9H511 634 aa10.16□□□□□ -0.78
USP4-214ENST00000491791 RUBCNLQ9H714 662 aa10.16□□□□□ -0.78
USP4-214ENST00000491791 FZD3Q9NPG1 666 aa10.16□□□□□ -0.78
USP4-214ENST00000491791 SEMA3GQ9NS98 782 aa10.16□□□□□ -0.78
USP4-214ENST00000491791 SPHK1Q9NYA1 384 aa10.16□□□□□ -0.78
USP4-214ENST00000491791 PILRAQ9UKJ1 303 aa10.16□□□□□ -0.78
USP4-214ENST00000491791 ACSL6Q9UKU0 697 aa10.16□□□□□ -0.78
USP4-214ENST00000491791 ENTPD2Q9Y5L3 495 aa10.16□□□□□ -0.78
USP4-214ENST00000491791 GMPPBQ9Y5P6 360 aa10.16□□□□□ -0.78
USP4-214ENST00000491791 DOCK9Q9BZ29 2069 aa10.16□□□□□ -0.78
USP4-214ENST00000491791 LRP4O75096 1905 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 PRAMEF33A0A0G2JMD5 474 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 A0A1W2PR48 441 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 CCDC160A6NGH7 325 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 CHURC1-FNTBB4DL54 471 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 H3BMQ9 156 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 HAT1O14929 419 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 LAMTOR5O43504 91 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 B4GAT1O43505 415 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 PRAMEF10O60809 474 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 OXSR1O95747 527 aaPredicted RBP10.15□□□□□ -0.78
USP4-214ENST00000491791 ANGPTL1O95841 491 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 IFNW1P05000 195 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 IL7RP16871 459 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 GABRG2P18507 467 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 CBLP22681 906 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 NTSP30990 170 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 MAT2AP31153 395 aaKnown RBP10.15□□□□□ -0.78
USP4-214ENST00000491791 ACSL1P33121 698 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 SOAT1P35610 550 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 GGT2P36268 569 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 RABIFP47224 123 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 TPD52P55327 224 aaPredicted RBP10.15□□□□□ -0.78
USP4-214ENST00000491791 SMIM11AP58511 58 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 STARD6P59095 220 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 SRP54P61011 504 aaKnown RBP10.15□□□□□ -0.78
USP4-214ENST00000491791 RPP38P78345 283 aaKnown RBP10.15□□□□□ -0.78
USP4-214ENST00000491791 PPP1R8Q12972 351 aaKnown RBP10.15□□□□□ -0.78
USP4-214ENST00000491791 PUM1Q14671 1186 aaKnown RBP eCLIP10.15□□□□□ -0.78
USP4-214ENST00000491791 TPRG1LQ5T0D9 272 aa10.15□□□□□ -0.78
USP4-214ENST00000491791 AP1ARQ63HQ0 302 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms