RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 Q6ZS92 163 aa15.18■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 ZNF605Q86T29 641 aa15.18■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 DDIASQ8IXT1 998 aa15.18■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 MMP21Q8N119 569 aa15.18■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 LGI4Q8N135 537 aa15.18■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 OR4K14Q8NGD5 310 aa15.18■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 FAM76AQ8TAV0 307 aa15.18■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 SLC2A12Q8TD20 617 aa15.18■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 MGARPQ8TDB4 240 aa15.18■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 C16orf78Q8WTQ4 265 aa15.18■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 HAS2Q92819 552 aa15.18■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 ARL8AQ96BM9 186 aa15.18■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 PPWD1Q96BP3 646 aaKnown RBP15.18■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 RBM18Q96H35 190 aaKnown RBP15.18■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 METTL2AQ96IZ6 378 aaKnown RBP15.18■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 NPAS2Q99743 824 aa15.18■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 DEFB126Q9BYW3 111 aa15.18■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 RNF32Q9H0A6 362 aa15.18■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 ILKAPQ9H0C8 392 aaPredicted RBP15.18■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 EPN3Q9H201 632 aa15.18■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 VIPAS39Q9H9C1 493 aa15.18■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 NKIRAS1Q9NYS0 192 aa15.18■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 PLA2G3Q9NZ20 509 aa15.18■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 STMN3Q9NZ72 180 aa15.18■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 ZDHHC2Q9UIJ5 367 aa15.18■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 ZNF223Q9UK11 482 aaPredicted RBP15.18■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 CSAG2Q9Y5P2 127 aa15.18■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 COL6A6A6NMZ7 2263 aa15.17■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 PIP5K1BO14986 540 aa15.17■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 ITM2AO43736 263 aa15.17■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 LYPLA1O75608 230 aaPredicted RBP15.17■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 SORBS2O94875 1100 aaKnown RBP15.17■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 DDAH2O95865 285 aa15.17■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 WDPCPO95876 746 aa15.17■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 IL3P08700 152 aa15.17■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 ANXA4P09525 319 aaPredicted RBP15.17■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 SLC35E2P0CK97 266 aa15.17■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 ALDH9A1P49189 494 aa15.17■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 WDR4P57081 412 aaKnown RBP15.17■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 ZNF763Q0D2J5 394 aa15.17■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 BEST3Q8N1M1 668 aa15.17■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 OR1N1Q8NGS0 311 aa15.17■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 OR2T11Q8NH01 316 aa15.17■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 ART5Q96L15 291 aa15.17■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 OR8D2Q9GZM6 311 aa15.17■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 CDCP1Q9H5V8 836 aa15.17■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 LRTM1Q9HBL6 345 aa15.17■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 SLAMF7Q9NQ25 335 aa15.17■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 C1orf109Q9NX04 203 aa15.17■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 LUZP4Q9P127 313 aa15.17■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 CES1P1Q9UKY3 287 aa15.17■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 DLGAP4Q9Y2H0 992 aa15.17■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 POLR3HQ9Y535 204 aaPredicted RBP15.17■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 MAN1A2O60476 641 aa15.16■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 SEC22BO75396 215 aa15.16■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 SNUPNO95149 360 aaKnown RBP15.16■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 DRD2P14416 443 aa15.16■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 GALNSP34059 522 aa15.16■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 SLC1A6P48664 564 aa15.16■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 STX3Q13277 289 aa15.16■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 HEPACAMQ14CZ8 416 aa15.16■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 SPRED3Q2MJR0 410 aa15.16■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 PLEKHN1Q494U1 663 aaPredicted RBP15.16■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 NOXRED1Q6NXP6 359 aa15.16■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 DGAT2L6Q6ZPD8 337 aa15.16■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 Q6ZSR9 355 aa15.16■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 RPS19BP1Q86WX3 136 aaKnown RBP15.16■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 GOLGA6L1Q8N7Z2 621 aa15.16■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 ZNF321PQ8N8H1 164 aa15.16■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 Q8NA96 180 aa15.16■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 CDC26Q8NHZ8 85 aa15.16■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 KLHL29Q96CT2 875 aa15.16■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 ATP6V1G3Q96LB4 118 aa15.16■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 SH3GL2Q99962 352 aa15.16■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 HEY2Q9UBP5 337 aa15.16■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 COPS7AQ9UBW8 275 aa15.16■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 PSME2Q9UL46 239 aa15.16■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 A0A1W2PS29 197 aa15.15■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 OR5H15A6NDH6 313 aa15.15■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 GABRR3A8MPY1 467 aa15.15■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 FCHO1O14526 889 aa15.15■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 LSM1O15116 133 aaKnown RBP15.15■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 SKAP2O75563 359 aaPredicted RBP15.15■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 ERAL1O75616 437 aaKnown RBP15.15■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 ZFAND5O76080 213 aa15.15■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 F10P00742 488 aa15.15■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 CPMP14384 443 aa15.15■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 PORP16435 677 aaPredicted RBP15.15■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 XKP51811 444 aa15.15■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 MLF1P58340 268 aa15.15■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 ZNF169Q14929 603 aaPredicted RBP15.15■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 KIAA0040Q15053 153 aa15.15■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 TLR1Q15399 786 aa15.15■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 ZNF750Q32MQ0 723 aa15.15■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 TTMPQ5BVD1 217 aa15.15■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 HSDL2Q6YN16 418 aa15.15■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 ARMC10Q8N2F6 343 aa15.15■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 ZNF781Q8N8C0 355 aa15.15■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 CATSPER1Q8NEC5 780 aa15.15■□□□□ 0.02
MSH5-SAPCD1-206ENST00000491552 ZNF721Q8TF20 911 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms