RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 METTL4Q8N3J2 472 aa18.33■□□□□ 0.52
SMC4-222ENST00000490207 POGLUT1Q8NBL1 392 aa18.33■□□□□ 0.52
SMC4-222ENST00000490207 OR5L2Q8NGL0 311 aa18.33■□□□□ 0.52
SMC4-222ENST00000490207 RELTQ969Z4 430 aa18.33■□□□□ 0.52
SMC4-222ENST00000490207 MAGED4Q96JG8 741 aa18.33■□□□□ 0.52
SMC4-222ENST00000490207 ZNF382Q96SR6 550 aa18.33■□□□□ 0.52
SMC4-222ENST00000490207 BRF2Q9HAW0 419 aa18.33■□□□□ 0.52
SMC4-222ENST00000490207 FARSBQ9NSD9 589 aaKnown RBP18.33■□□□□ 0.52
SMC4-222ENST00000490207 ZNF225Q9UK10 706 aa18.33■□□□□ 0.52
SMC4-222ENST00000490207 DIDO1Q9BTC0 2240 aaKnown RBP18.33■□□□□ 0.52
SMC4-222ENST00000490207 ARHGAP10A1A4S6 786 aa18.32■□□□□ 0.52
SMC4-222ENST00000490207 KLRC4-KLRK1H3BQV0 150 aa18.32■□□□□ 0.52
SMC4-222ENST00000490207 PEX1O43933 1283 aa18.32■□□□□ 0.52
SMC4-222ENST00000490207 GLRA3O75311 464 aa18.32■□□□□ 0.52
SMC4-222ENST00000490207 OR6B1O95007 311 aa18.32■□□□□ 0.52
SMC4-222ENST00000490207 SHBGP04278 402 aa18.32■□□□□ 0.52
SMC4-222ENST00000490207 KLK1P06870 262 aa18.32■□□□□ 0.52
SMC4-222ENST00000490207 RASA2Q15283 850 aa18.32■□□□□ 0.52
SMC4-222ENST00000490207 SPRED3Q2MJR0 410 aa18.32■□□□□ 0.52
SMC4-222ENST00000490207 IL20RBQ6UXL0 311 aa18.32■□□□□ 0.52
SMC4-222ENST00000490207 MDGA2Q7Z553 956 aa18.32■□□□□ 0.52
SMC4-222ENST00000490207 SULF2Q8IWU5 870 aa18.32■□□□□ 0.52
SMC4-222ENST00000490207 PSD4Q8NDX1 1056 aa18.32■□□□□ 0.52
SMC4-222ENST00000490207 SENP5Q96HI0 755 aaPredicted RBP18.32■□□□□ 0.52
SMC4-222ENST00000490207 FBXL20Q96IG2 436 aa18.32■□□□□ 0.52
SMC4-222ENST00000490207 CNPPD1Q9BV87 410 aa18.32■□□□□ 0.52
SMC4-222ENST00000490207 SH3BGRL2Q9UJC5 107 aa18.32■□□□□ 0.52
SMC4-222ENST00000490207 A0A1W2PPM1 405 aa18.31■□□□□ 0.52
SMC4-222ENST00000490207 SMIM23A6NLE4 172 aa18.31■□□□□ 0.52
SMC4-222ENST00000490207 HRKO00198 91 aa18.31■□□□□ 0.52
SMC4-222ENST00000490207 SLC19A2O60779 497 aa18.31■□□□□ 0.52
SMC4-222ENST00000490207 ZG16O60844 167 aa18.31■□□□□ 0.52
SMC4-222ENST00000490207 IGKV3-11P04433 115 aa18.31■□□□□ 0.52
SMC4-222ENST00000490207 CA7P43166 264 aa18.31■□□□□ 0.52
SMC4-222ENST00000490207 SLCO1A2P46721 670 aa18.31■□□□□ 0.52
SMC4-222ENST00000490207 PRKAA2P54646 552 aa18.31■□□□□ 0.52
SMC4-222ENST00000490207 GPR85P60893 370 aa18.31■□□□□ 0.52
SMC4-222ENST00000490207 ERVK-8P63133 956 aa18.31■□□□□ 0.52
SMC4-222ENST00000490207 RNFT1Q5M7Z0 435 aa18.31■□□□□ 0.52
SMC4-222ENST00000490207 TCHHL1Q5QJ38 904 aaPredicted RBP18.31■□□□□ 0.52
SMC4-222ENST00000490207 CCNYL2Q5T2Q4 361 aa18.31■□□□□ 0.52
SMC4-222ENST00000490207 GPRIN3Q6ZVF9 776 aa18.31■□□□□ 0.52
SMC4-222ENST00000490207 COMMD6Q7Z4G1 85 aa18.31■□□□□ 0.52
SMC4-222ENST00000490207 C9orf40Q8IXQ3 194 aa18.31■□□□□ 0.52
SMC4-222ENST00000490207 CDYL2Q8N8U2 506 aa18.31■□□□□ 0.52
SMC4-222ENST00000490207 NUBPLQ8TB37 319 aa18.31■□□□□ 0.52
SMC4-222ENST00000490207 L3HYPDHQ96EM0 354 aa18.31■□□□□ 0.52
SMC4-222ENST00000490207 HBEGFQ99075 208 aa18.31■□□□□ 0.52
SMC4-222ENST00000490207 PPCSQ9HAB8 311 aa18.31■□□□□ 0.52
SMC4-222ENST00000490207 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.31■□□□□ 0.52
SMC4-222ENST00000490207 SUCOQ9UBS9 1254 aaKnown RBP18.31■□□□□ 0.52
SMC4-222ENST00000490207 DCDC2Q9UHG0 476 aa18.31■□□□□ 0.52
SMC4-222ENST00000490207 ERVK-19Q9WJR5 959 aa18.31■□□□□ 0.52
SMC4-222ENST00000490207 STK38LQ9Y2H1 464 aa18.31■□□□□ 0.52
SMC4-222ENST00000490207 WASHC1A8K0Z3 465 aa18.3■□□□□ 0.52
SMC4-222ENST00000490207 TFECO14948 347 aaPredicted RBP18.3■□□□□ 0.52
SMC4-222ENST00000490207 ASNA1O43681 348 aa18.3■□□□□ 0.52
SMC4-222ENST00000490207 KRT6AP02538 564 aa18.3■□□□□ 0.52
SMC4-222ENST00000490207 KRT6BP04259 564 aa18.3■□□□□ 0.52
SMC4-222ENST00000490207 IMPDH1P20839 514 aa18.3■□□□□ 0.52
SMC4-222ENST00000490207 PIK3R1P27986 724 aa18.3■□□□□ 0.52
SMC4-222ENST00000490207 HMOX2P30519 316 aa18.3■□□□□ 0.52
SMC4-222ENST00000490207 RFC3P40938 356 aa18.3■□□□□ 0.52
SMC4-222ENST00000490207 KRT6CP48668 564 aa18.3■□□□□ 0.52
SMC4-222ENST00000490207 MAPK12P53778 367 aa18.3■□□□□ 0.52
SMC4-222ENST00000490207 CASP6P55212 293 aa18.3■□□□□ 0.52
SMC4-222ENST00000490207 GALNT1Q10472 559 aaPredicted RBP18.3■□□□□ 0.52
SMC4-222ENST00000490207 NDUFAF5Q5TEU4 345 aa18.3■□□□□ 0.52
SMC4-222ENST00000490207 TDRPQ86YL5 185 aa18.3■□□□□ 0.52
SMC4-222ENST00000490207 GHDCQ8N2G8 530 aa18.3■□□□□ 0.52
SMC4-222ENST00000490207 EPS8L3Q8TE67 593 aaKnown RBP18.3■□□□□ 0.52
SMC4-222ENST00000490207 DOK4Q8TEW6 326 aa18.3■□□□□ 0.52
SMC4-222ENST00000490207 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.3■□□□□ 0.52
SMC4-222ENST00000490207 RIT1Q92963 219 aa18.3■□□□□ 0.52
SMC4-222ENST00000490207 UCN3Q969E3 161 aa18.3■□□□□ 0.52
SMC4-222ENST00000490207 NMRK1Q9NWW6 199 aa18.3■□□□□ 0.52
SMC4-222ENST00000490207 EMCNQ9ULC0 261 aa18.3■□□□□ 0.52
SMC4-222ENST00000490207 EML6Q6ZMW3 1958 aa18.3■□□□□ 0.52
SMC4-222ENST00000490207 FOXO6A8MYZ6 492 aa18.29■□□□□ 0.52
SMC4-222ENST00000490207 MANBAO00462 879 aa18.29■□□□□ 0.52
SMC4-222ENST00000490207 CCL21O00585 134 aa18.29■□□□□ 0.52
SMC4-222ENST00000490207 PGRMC2O15173 223 aa18.29■□□□□ 0.52
SMC4-222ENST00000490207 SLC35E2P0CK97 266 aa18.29■□□□□ 0.52
SMC4-222ENST00000490207 HSD3B1P14060 373 aa18.29■□□□□ 0.52
SMC4-222ENST00000490207 KRT15P19012 456 aa18.29■□□□□ 0.52
SMC4-222ENST00000490207 HSD3B2P26439 372 aa18.29■□□□□ 0.52
SMC4-222ENST00000490207 HSF1Q00613 529 aa18.29■□□□□ 0.52
SMC4-222ENST00000490207 ASPHQ12797 758 aa18.29■□□□□ 0.52
SMC4-222ENST00000490207 CSTF3Q12996 717 aaKnown RBP18.29■□□□□ 0.52
SMC4-222ENST00000490207 LCP2Q13094 533 aa18.29■□□□□ 0.52
SMC4-222ENST00000490207 ZNF267Q14586 743 aaPredicted RBP18.29■□□□□ 0.52
SMC4-222ENST00000490207 C3AR1Q16581 482 aa18.29■□□□□ 0.52
SMC4-222ENST00000490207 OPN5Q6U736 354 aa18.29■□□□□ 0.52
SMC4-222ENST00000490207 RNF111Q6ZNA4 994 aa18.29■□□□□ 0.52
SMC4-222ENST00000490207 RTL4Q6ZR62 310 aa18.29■□□□□ 0.52
SMC4-222ENST00000490207 SLC29A4Q7RTT9 530 aa18.29■□□□□ 0.52
SMC4-222ENST00000490207 ZFP62Q8NB50 900 aaPredicted RBP18.29■□□□□ 0.52
SMC4-222ENST00000490207 SLC22A8Q8TCC7 542 aa18.29■□□□□ 0.52
SMC4-222ENST00000490207 ANKZF1Q9H8Y5 726 aa18.29■□□□□ 0.52
SMC4-222ENST00000490207 DEPPQ9NTK1 212 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms