RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 HMGCLP35914 325 aa3.83□□□□□ -1.8
CCDC39-206ENST00000489868 MSLNQ13421 630 aaPredicted RBP3.83□□□□□ -1.8
CCDC39-206ENST00000489868 TIMM50Q3ZCQ8 353 aa3.83□□□□□ -1.8
CCDC39-206ENST00000489868 PRR30Q53SZ7 412 aaPredicted RBP3.83□□□□□ -1.8
CCDC39-206ENST00000489868 ZNF789Q5FWF6 425 aa3.83□□□□□ -1.8
CCDC39-206ENST00000489868 RELL2Q8NC24 303 aaPredicted RBP3.83□□□□□ -1.8
CCDC39-206ENST00000489868 GTSF1Q8WW33 167 aa3.83□□□□□ -1.8
CCDC39-206ENST00000489868 MCCC1Q96RQ3 725 aaPredicted RBP3.83□□□□□ -1.8
CCDC39-206ENST00000489868 RNPEPL1Q9HAU8 725 aa3.83□□□□□ -1.8
CCDC39-206ENST00000489868 ABCD2Q9UBJ2 740 aa3.83□□□□□ -1.8
CCDC39-206ENST00000489868 LIPT1Q9Y234 373 aa3.83□□□□□ -1.8
CCDC39-206ENST00000489868 EXOC6BQ9Y2D4 811 aa3.83□□□□□ -1.8
CCDC39-206ENST00000489868 C13orf42A0A1B0GVH6 325 aa3.82□□□□□ -1.8
CCDC39-206ENST00000489868 FAM168BA1KXE4 195 aa3.82□□□□□ -1.8
CCDC39-206ENST00000489868 FAM149AA5PLN7 773 aa3.82□□□□□ -1.8
CCDC39-206ENST00000489868 LRRTM2O43300 516 aa3.82□□□□□ -1.8
CCDC39-206ENST00000489868 CRCPO75575 148 aa3.82□□□□□ -1.8
CCDC39-206ENST00000489868 TGDSO95455 350 aa3.82□□□□□ -1.8
CCDC39-206ENST00000489868 PIGRP01833 764 aa3.82□□□□□ -1.8
CCDC39-206ENST00000489868 TCF7P36402 384 aaPredicted RBP3.82□□□□□ -1.8
CCDC39-206ENST00000489868 ALDH3B1P43353 468 aa3.82□□□□□ -1.8
CCDC39-206ENST00000489868 TKTL1P51854 596 aa3.82□□□□□ -1.8
CCDC39-206ENST00000489868 TRA2BP62995 288 aaKnown RBP3.82□□□□□ -1.8
CCDC39-206ENST00000489868 NDPQ00604 133 aa3.82□□□□□ -1.8
CCDC39-206ENST00000489868 HEPACAMQ14CZ8 416 aa3.82□□□□□ -1.8
CCDC39-206ENST00000489868 ABRAXAS2Q15018 415 aa3.82□□□□□ -1.8
CCDC39-206ENST00000489868 P2RY14Q15391 338 aa3.82□□□□□ -1.8
CCDC39-206ENST00000489868 UNC50Q53HI1 259 aa3.82□□□□□ -1.8
CCDC39-206ENST00000489868 PRAMEF8Q5VWM4 474 aa3.82□□□□□ -1.8
CCDC39-206ENST00000489868 KCTD11Q693B1 232 aa3.82□□□□□ -1.8
CCDC39-206ENST00000489868 Q6ZRG5 221 aa3.82□□□□□ -1.8
CCDC39-206ENST00000489868 KRT77Q7Z794 578 aa3.82□□□□□ -1.8
CCDC39-206ENST00000489868 TMEM126BQ8IUX1 230 aa3.82□□□□□ -1.8
CCDC39-206ENST00000489868 ZBED8Q8IZ13 594 aa3.82□□□□□ -1.8
CCDC39-206ENST00000489868 TCP11Q8WWU5 503 aa3.82□□□□□ -1.8
CCDC39-206ENST00000489868 GUCD1Q96NT3 240 aa3.82□□□□□ -1.8
CCDC39-206ENST00000489868 ZBP1Q9H171 429 aa3.82□□□□□ -1.8
CCDC39-206ENST00000489868 IL1RL2Q9HB29 575 aa3.82□□□□□ -1.8
CCDC39-206ENST00000489868 CUTCQ9NTM9 273 aa3.82□□□□□ -1.8
CCDC39-206ENST00000489868 ABCB8Q9NUT2 735 aa3.82□□□□□ -1.8
CCDC39-206ENST00000489868 A0A1W2PRQ8 180 aa3.81□□□□□ -1.8
CCDC39-206ENST00000489868 SLC15A5A6NIM6 579 aa3.81□□□□□ -1.8
CCDC39-206ENST00000489868 ZNF487B1APH4 448 aa3.81□□□□□ -1.8
CCDC39-206ENST00000489868 PSMA7O14818 248 aa3.81□□□□□ -1.8
CCDC39-206ENST00000489868 MCF2LO15068 1137 aa3.81□□□□□ -1.8
CCDC39-206ENST00000489868 TSC22D2O75157 780 aa3.81□□□□□ -1.8
CCDC39-206ENST00000489868 GIT2Q14161 759 aa3.81□□□□□ -1.8
CCDC39-206ENST00000489868 EPC2Q52LR7 807 aa3.81□□□□□ -1.8
CCDC39-206ENST00000489868 UTF1Q5T230 341 aa3.81□□□□□ -1.8
CCDC39-206ENST00000489868 KCTD9Q7L273 389 aa3.81□□□□□ -1.8
CCDC39-206ENST00000489868 GDAP1Q8TB36 358 aa3.81□□□□□ -1.8
CCDC39-206ENST00000489868 HAS2Q92819 552 aa3.81□□□□□ -1.8
CCDC39-206ENST00000489868 RAB3CQ96E17 227 aa3.81□□□□□ -1.8
CCDC39-206ENST00000489868 DESI2Q9BSY9 194 aa3.81□□□□□ -1.8
CCDC39-206ENST00000489868 SLC25A19Q9HC21 320 aa3.81□□□□□ -1.8
CCDC39-206ENST00000489868 Q9UF83 564 aa3.81□□□□□ -1.8
CCDC39-206ENST00000489868 ERVK-19Q9WJR5 959 aa3.81□□□□□ -1.8
CCDC39-206ENST00000489868 KIF25-AS1Q9Y6Z4 181 aa3.81□□□□□ -1.8
CCDC39-206ENST00000489868 SMIM30A4D0T7 59 aa3.8□□□□□ -1.8
CCDC39-206ENST00000489868 SAP18O00422 153 aaKnown RBP3.8□□□□□ -1.8
CCDC39-206ENST00000489868 FCGR3AP08637 254 aa3.8□□□□□ -1.8
CCDC39-206ENST00000489868 GSTA2P09210 222 aa3.8□□□□□ -1.8
CCDC39-206ENST00000489868 SBK2P0C263 348 aa3.8□□□□□ -1.8
CCDC39-206ENST00000489868 UMPSP11172 480 aa3.8□□□□□ -1.8
CCDC39-206ENST00000489868 VCLP18206 1134 aa3.8□□□□□ -1.8
CCDC39-206ENST00000489868 FASP25445 335 aa3.8□□□□□ -1.8
CCDC39-206ENST00000489868 SERPINH1P50454 418 aaKnown RBP3.8□□□□□ -1.8
CCDC39-206ENST00000489868 HMGCS2P54868 508 aa3.8□□□□□ -1.8
CCDC39-206ENST00000489868 SNU13P55769 128 aaKnown RBP3.8□□□□□ -1.8
CCDC39-206ENST00000489868 NAAAQ02083 359 aa3.8□□□□□ -1.8
CCDC39-206ENST00000489868 CRMP1Q14194 572 aa3.8□□□□□ -1.8
CCDC39-206ENST00000489868 EMC2Q15006 297 aa3.8□□□□□ -1.8
CCDC39-206ENST00000489868 ANKRD55Q3KP44 614 aa3.8□□□□□ -1.8
CCDC39-206ENST00000489868 LIPJQ5W064 366 aa3.8□□□□□ -1.8
CCDC39-206ENST00000489868 PAMR1Q6UXH9 720 aa3.8□□□□□ -1.8
CCDC39-206ENST00000489868 ZNF600Q6ZNG1 722 aa3.8□□□□□ -1.8
CCDC39-206ENST00000489868 PARP8Q8N3A8 854 aa3.8□□□□□ -1.8
CCDC39-206ENST00000489868 OR4L1Q8NH43 312 aa3.8□□□□□ -1.8
CCDC39-206ENST00000489868 GOLGA5Q8TBA6 731 aa3.8□□□□□ -1.8
CCDC39-206ENST00000489868 RNASE8Q8TDE3 154 aaKnown RBP3.8□□□□□ -1.8
CCDC39-206ENST00000489868 UBTD2Q8WUN7 234 aa3.8□□□□□ -1.8
CCDC39-206ENST00000489868 MRPL53Q96EL3 112 aaKnown RBP3.8□□□□□ -1.8
CCDC39-206ENST00000489868 C16orf58Q96GQ5 468 aa3.8□□□□□ -1.8
CCDC39-206ENST00000489868 TTYH2Q9BSA4 534 aa3.8□□□□□ -1.8
CCDC39-206ENST00000489868 ST6GALNAC5Q9BVH7 336 aa3.8□□□□□ -1.8
CCDC39-206ENST00000489868 TNMDQ9H2S6 317 aa3.8□□□□□ -1.8
CCDC39-206ENST00000489868 DPEP3Q9H4B8 488 aa3.8□□□□□ -1.8
CCDC39-206ENST00000489868 GDF3Q9NR23 364 aa3.8□□□□□ -1.8
CCDC39-206ENST00000489868 TAS2R16Q9NYV7 291 aa3.8□□□□□ -1.8
CCDC39-206ENST00000489868 B4GALT7Q9UBV7 327 aa3.8□□□□□ -1.8
CCDC39-206ENST00000489868 RNF24Q9Y225 148 aa3.8□□□□□ -1.8
CCDC39-206ENST00000489868 KCNK6Q9Y257 313 aa3.8□□□□□ -1.8
CCDC39-206ENST00000489868 ZFP37Q9Y6Q3 630 aaPredicted RBP3.8□□□□□ -1.8
CCDC39-206ENST00000489868 ZSCAN5CA6NGD5 496 aaPredicted RBP3.79□□□□□ -1.8
CCDC39-206ENST00000489868 TXNDC12O95881 172 aa3.79□□□□□ -1.8
CCDC39-206ENST00000489868 CT45A8P0DMV1 189 aa3.79□□□□□ -1.8
CCDC39-206ENST00000489868 CT45A9P0DMV2 189 aa3.79□□□□□ -1.8
CCDC39-206ENST00000489868 CPA3P15088 417 aa3.79□□□□□ -1.8
CCDC39-206ENST00000489868 TNNT3P45378 269 aaPredicted RBP3.79□□□□□ -1.8
CCDC39-206ENST00000489868 RPS6KA1Q15418 735 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms