RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 WASHC1A8K0Z3 465 aa13.32□□□□□ -0.28
VPS26A-205ENST00000489656 ERAL1O75616 437 aaKnown RBP13.32□□□□□ -0.28
VPS26A-205ENST00000489656 GPR75O95800 540 aa13.32□□□□□ -0.28
VPS26A-205ENST00000489656 ONECUT2O95948 504 aa13.32□□□□□ -0.28
VPS26A-205ENST00000489656 CDK4P11802 303 aa13.32□□□□□ -0.28
VPS26A-205ENST00000489656 HTR1EP28566 365 aa13.32□□□□□ -0.28
VPS26A-205ENST00000489656 MPIP34949 423 aa13.32□□□□□ -0.28
VPS26A-205ENST00000489656 GZMMP51124 257 aa13.32□□□□□ -0.28
VPS26A-205ENST00000489656 ACTR3P61158 418 aa13.32□□□□□ -0.28
VPS26A-205ENST00000489656 IGLV3-21P80748 117 aaPredicted RBP13.32□□□□□ -0.28
VPS26A-205ENST00000489656 SIM1P81133 766 aaPredicted RBP13.32□□□□□ -0.28
VPS26A-205ENST00000489656 MC2RQ01718 297 aa13.32□□□□□ -0.28
VPS26A-205ENST00000489656 VAC14Q08AM6 782 aa13.32□□□□□ -0.28
VPS26A-205ENST00000489656 CPZQ66K79 652 aa13.32□□□□□ -0.28
VPS26A-205ENST00000489656 ZNF551Q7Z340 670 aaPredicted RBP13.32□□□□□ -0.28
VPS26A-205ENST00000489656 LRRC25Q8N386 305 aaPredicted RBP13.32□□□□□ -0.28
VPS26A-205ENST00000489656 RNF148Q8N7C7 305 aa13.32□□□□□ -0.28
VPS26A-205ENST00000489656 TMEM52Q8NDY8 209 aa13.32□□□□□ -0.28
VPS26A-205ENST00000489656 OR51Q1Q8NH59 317 aa13.32□□□□□ -0.28
VPS26A-205ENST00000489656 SFXN5Q8TD22 340 aa13.32□□□□□ -0.28
VPS26A-205ENST00000489656 WDR60Q8WVS4 1066 aa13.32□□□□□ -0.28
VPS26A-205ENST00000489656 CCDC124Q96CT7 223 aaKnown RBP13.32□□□□□ -0.28
VPS26A-205ENST00000489656 AURKBQ96GD4 344 aaPredicted RBP13.32□□□□□ -0.28
VPS26A-205ENST00000489656 ZNF583Q96ND8 569 aa13.32□□□□□ -0.28
VPS26A-205ENST00000489656 OR1F2PQ96R84 312 aa13.32□□□□□ -0.28
VPS26A-205ENST00000489656 ECSITQ9BQ95 431 aa13.32□□□□□ -0.28
VPS26A-205ENST00000489656 THUMPD3Q9BV44 507 aaKnown RBP13.32□□□□□ -0.28
VPS26A-205ENST00000489656 TRIM8Q9BZR9 551 aa13.32□□□□□ -0.28
VPS26A-205ENST00000489656 CXorf36Q9H7Y0 433 aa13.32□□□□□ -0.28
VPS26A-205ENST00000489656 FBXO8Q9NRD0 319 aa13.32□□□□□ -0.28
VPS26A-205ENST00000489656 OCIAD1Q9NX40 245 aa13.32□□□□□ -0.28
VPS26A-205ENST00000489656 HCN3Q9P1Z3 774 aa13.32□□□□□ -0.28
VPS26A-205ENST00000489656 BCAP29Q9UHQ4 241 aa13.32□□□□□ -0.28
VPS26A-205ENST00000489656 PACSIN3Q9UKS6 424 aa13.32□□□□□ -0.28
VPS26A-205ENST00000489656 CLCA2Q9UQC9 943 aa13.32□□□□□ -0.28
VPS26A-205ENST00000489656 MAP4K5Q9Y4K4 846 aa13.32□□□□□ -0.28
VPS26A-205ENST00000489656 TMEM184BQ9Y519 407 aaPredicted RBP13.32□□□□□ -0.28
VPS26A-205ENST00000489656 PTPRBP23467 1997 aa13.32□□□□□ -0.28
VPS26A-205ENST00000489656 A8MUI8 341 aa13.31□□□□□ -0.28
VPS26A-205ENST00000489656 FAM220BPB1ANY3 271 aa13.31□□□□□ -0.28
VPS26A-205ENST00000489656 B4E171 279 aa13.31□□□□□ -0.28
VPS26A-205ENST00000489656 ACOT8O14734 319 aa13.31□□□□□ -0.28
VPS26A-205ENST00000489656 MGRN1O60291 552 aa13.31□□□□□ -0.28
VPS26A-205ENST00000489656 GDF9O60383 454 aa13.31□□□□□ -0.28
VPS26A-205ENST00000489656 BCAS2O75934 225 aaPredicted RBP13.31□□□□□ -0.28
VPS26A-205ENST00000489656 SLITRK5O94991 958 aa13.31□□□□□ -0.28
VPS26A-205ENST00000489656 KRT75O95678 551 aa13.31□□□□□ -0.28
VPS26A-205ENST00000489656 CPMP14384 443 aa13.31□□□□□ -0.28
VPS26A-205ENST00000489656 PORP16435 677 aaPredicted RBP13.31□□□□□ -0.28
VPS26A-205ENST00000489656 TSPAN7P41732 249 aa13.31□□□□□ -0.28
VPS26A-205ENST00000489656 MAGEA8P43361 318 aa13.31□□□□□ -0.28
VPS26A-205ENST00000489656 CDK9P50750 372 aaKnown RBP13.31□□□□□ -0.28
VPS26A-205ENST00000489656 XKP51811 444 aa13.31□□□□□ -0.28
VPS26A-205ENST00000489656 NCBP2P52298 156 aaKnown RBP eCLIP13.31□□□□□ -0.283e-6■■□□□ 12.9
VPS26A-205ENST00000489656 INSM1Q01101 510 aaPredicted RBP13.31□□□□□ -0.28
VPS26A-205ENST00000489656 FOLH1Q04609 750 aa13.31□□□□□ -0.28
VPS26A-205ENST00000489656 DUSP2Q05923 314 aa13.31□□□□□ -0.28
VPS26A-205ENST00000489656 FADDQ13158 208 aa13.31□□□□□ -0.28
VPS26A-205ENST00000489656 BIKQ13323 160 aa13.31□□□□□ -0.28
VPS26A-205ENST00000489656 RIPK1Q13546 671 aa13.31□□□□□ -0.28
VPS26A-205ENST00000489656 KPNB1Q14974 876 aaKnown RBP13.31□□□□□ -0.28
VPS26A-205ENST00000489656 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.31□□□□□ -0.28
VPS26A-205ENST00000489656 C1orf146Q5VVC0 180 aa13.31□□□□□ -0.28
VPS26A-205ENST00000489656 SAXO2Q658L1 398 aa13.31□□□□□ -0.28
VPS26A-205ENST00000489656 FAM180BQ6P0A1 224 aa13.31□□□□□ -0.28
VPS26A-205ENST00000489656 SERPINA11Q86U17 422 aa13.31□□□□□ -0.28
VPS26A-205ENST00000489656 PPP1R3BQ86XI6 285 aa13.31□□□□□ -0.28
VPS26A-205ENST00000489656 C7orf57Q8NEG2 295 aa13.31□□□□□ -0.28
VPS26A-205ENST00000489656 TNIP2Q8NFZ5 429 aa13.31□□□□□ -0.28
VPS26A-205ENST00000489656 ANKRD9Q96BM1 317 aaPredicted RBP13.31□□□□□ -0.28
VPS26A-205ENST00000489656 MOAP1Q96BY2 351 aa13.31□□□□□ -0.28
VPS26A-205ENST00000489656 TBC1D20Q96BZ9 403 aa13.31□□□□□ -0.28
VPS26A-205ENST00000489656 NEURL3Q96EH8 262 aa13.31□□□□□ -0.28
VPS26A-205ENST00000489656 PEX11GQ96HA9 241 aa13.31□□□□□ -0.28
VPS26A-205ENST00000489656 KCTD14Q9BQ13 255 aaPredicted RBP13.31□□□□□ -0.28
VPS26A-205ENST00000489656 SLC35A5Q9BS91 424 aa13.31□□□□□ -0.28
VPS26A-205ENST00000489656 CHST8Q9H2A9 424 aa13.31□□□□□ -0.28
VPS26A-205ENST00000489656 ZNF304Q9HCX3 659 aa13.31□□□□□ -0.28
VPS26A-205ENST00000489656 SEMA3GQ9NS98 782 aa13.31□□□□□ -0.28
VPS26A-205ENST00000489656 TOR4AQ9NXH8 423 aa13.31□□□□□ -0.28
VPS26A-205ENST00000489656 NTMQ9P121 344 aa13.31□□□□□ -0.28
VPS26A-205ENST00000489656 DHCR7Q9UBM7 475 aaKnown RBP13.31□□□□□ -0.28
VPS26A-205ENST00000489656 NDOR1Q9UHB4 597 aa13.31□□□□□ -0.28
VPS26A-205ENST00000489656 EFCAB7A8K855 629 aa13.3□□□□□ -0.28
VPS26A-205ENST00000489656 FAM227AF5H4B4 570 aa13.3□□□□□ -0.28
VPS26A-205ENST00000489656 HYAL3O43820 417 aaPredicted RBP13.3□□□□□ -0.28
VPS26A-205ENST00000489656 FGF17O60258 216 aa13.3□□□□□ -0.28
VPS26A-205ENST00000489656 CTNSO60931 367 aa13.3□□□□□ -0.28
VPS26A-205ENST00000489656 SCRG1O75711 98 aa13.3□□□□□ -0.28
VPS26A-205ENST00000489656 DKK1O94907 266 aa13.3□□□□□ -0.28
VPS26A-205ENST00000489656 ATP1B1P05026 303 aa13.3□□□□□ -0.28
VPS26A-205ENST00000489656 FHP07954 510 aa13.3□□□□□ -0.28
VPS26A-205ENST00000489656 FBLP22087 321 aaKnown RBP13.3□□□□□ -0.28
VPS26A-205ENST00000489656 ALAS2P22557 587 aa13.3□□□□□ -0.28
VPS26A-205ENST00000489656 FEN1P39748 380 aaKnown RBP13.3□□□□□ -0.28
VPS26A-205ENST00000489656 XCR1P46094 333 aa13.3□□□□□ -0.28
VPS26A-205ENST00000489656 MVDP53602 400 aa13.3□□□□□ -0.28
VPS26A-205ENST00000489656 HSD17B7P56937 341 aa13.3□□□□□ -0.28
VPS26A-205ENST00000489656 MAT1AQ00266 395 aaKnown RBP13.3□□□□□ -0.28
VPS26A-205ENST00000489656 MS4A2Q01362 244 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms