RNA–Protein interactions for RNA: ENST00000489583.1

APTX-229, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 397 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-229ENST00000489583 WDR41Q9HAD4 459 aa17.95■□□□□ 0.46
APTX-229ENST00000489583 QPCTLQ9NXS2 382 aa17.95■□□□□ 0.46
APTX-229ENST00000489583 PTBP2Q9UKA9 531 aaKnown RBP17.95■□□□□ 0.46
APTX-229ENST00000489583 PCDHGB3Q9Y5G1 929 aa17.95■□□□□ 0.46
APTX-229ENST00000489583 FAM215AQ9Y5M1 114 aa17.95■□□□□ 0.46
APTX-229ENST00000489583 MED13LQ71F56 2210 aa17.95■□□□□ 0.46
APTX-229ENST00000489583 INTS1Q8N201 2190 aaKnown RBP17.94■□□□□ 0.46
APTX-229ENST00000489583 SUPT3HB4E1H0 165 aa17.94■□□□□ 0.46
APTX-229ENST00000489583 RTCAO00442 366 aaKnown RBP17.94■□□□□ 0.46
APTX-229ENST00000489583 TP53I11O14683 189 aa17.94■□□□□ 0.46
APTX-229ENST00000489583 SUPT3HO75486 399 aa17.94■□□□□ 0.46
APTX-229ENST00000489583 KRT38O76015 456 aa17.94■□□□□ 0.46
APTX-229ENST00000489583 ETHE1O95571 254 aa17.94■□□□□ 0.46
APTX-229ENST00000489583 CD1DP15813 335 aa17.94■□□□□ 0.46
APTX-229ENST00000489583 ALOX15P16050 662 aaPredicted RBP17.94■□□□□ 0.46
APTX-229ENST00000489583 EPB42P16452 691 aa17.94■□□□□ 0.46
APTX-229ENST00000489583 SPRP35270 261 aaPredicted RBP17.94■□□□□ 0.46
APTX-229ENST00000489583 IST1P53990 364 aa17.94■□□□□ 0.46
APTX-229ENST00000489583 RAB10P61026 200 aa17.94■□□□□ 0.46
APTX-229ENST00000489583 DDX39BQ13838 428 aaKnown RBP17.94■□□□□ 0.46
APTX-229ENST00000489583 FASTKD3Q14CZ7 662 aaKnown RBP17.94■□□□□ 0.46
APTX-229ENST00000489583 C6orf163Q5TEZ5 329 aa17.94■□□□□ 0.46
APTX-229ENST00000489583 KHDRBS2Q5VWX1 349 aaKnown RBP17.94■□□□□ 0.46
APTX-229ENST00000489583 HLA-DQA1Q5Y7H0 255 aa17.94■□□□□ 0.46
APTX-229ENST00000489583 TMEM198Q66K66 360 aa17.94■□□□□ 0.46
APTX-229ENST00000489583 RNF111Q6ZNA4 994 aa17.94■□□□□ 0.46
APTX-229ENST00000489583 GPR180Q86V85 440 aa17.94■□□□□ 0.46
APTX-229ENST00000489583 CTAGE3PQ8IX95 158 aa17.94■□□□□ 0.46
APTX-229ENST00000489583 OR4N5Q8IXE1 308 aa17.94■□□□□ 0.46
APTX-229ENST00000489583 ZNF473Q8WTR7 871 aaKnown RBP17.94■□□□□ 0.46
APTX-229ENST00000489583 REPS1Q96D71 796 aa17.94■□□□□ 0.46
APTX-229ENST00000489583 FOXC2Q99958 501 aa17.94■□□□□ 0.46
APTX-229ENST00000489583 WDR83Q9BRX9 315 aaKnown RBP17.94■□□□□ 0.46
APTX-229ENST00000489583 DOHHQ9BU89 302 aa17.94■□□□□ 0.46
APTX-229ENST00000489583 CLEC4MQ9H2X3 399 aaPredicted RBP17.94■□□□□ 0.46
APTX-229ENST00000489583 NMRAL1Q9HBL8 299 aa17.94■□□□□ 0.46
APTX-229ENST00000489583 NUDT4Q9NZJ9 180 aa17.94■□□□□ 0.46
APTX-229ENST00000489583 MTRF1LQ9UGC7 380 aaKnown RBP17.94■□□□□ 0.46
APTX-229ENST00000489583 PHF3Q92576 2039 aaKnown RBP17.93■□□□□ 0.46
APTX-229ENST00000489583 C15orf38-AP3S2A0A0A6YYH1 394 aa17.93■□□□□ 0.46
APTX-229ENST00000489583 SAP18O00422 153 aaKnown RBP17.93■□□□□ 0.46
APTX-229ENST00000489583 CELA3AP09093 270 aa17.93■□□□□ 0.46
APTX-229ENST00000489583 GDF1P27539 372 aa17.93■□□□□ 0.46
APTX-229ENST00000489583 GP5P40197 560 aa17.93■□□□□ 0.46
APTX-229ENST00000489583 CASP2P42575 452 aa17.93■□□□□ 0.46
APTX-229ENST00000489583 NR0B1P51843 470 aaKnown RBP17.93■□□□□ 0.46
APTX-229ENST00000489583 RPP38P78345 283 aaKnown RBP17.93■□□□□ 0.46
APTX-229ENST00000489583 FOXO1Q12778 655 aa17.93■□□□□ 0.46
APTX-229ENST00000489583 OR4D1Q15615 310 aa17.93■□□□□ 0.46
APTX-229ENST00000489583 GLE1Q53GS7 698 aaKnown RBP17.93■□□□□ 0.46
APTX-229ENST00000489583 TBCELQ5QJ74 424 aa17.93■□□□□ 0.46
APTX-229ENST00000489583 PRAMEF20Q5VT98 475 aa17.93■□□□□ 0.46
APTX-229ENST00000489583 ADNP2Q6IQ32 1131 aa17.93■□□□□ 0.46
APTX-229ENST00000489583 CYP20A1Q6UW02 462 aa17.93■□□□□ 0.46
APTX-229ENST00000489583 ZNF793Q6ZN11 406 aa17.93■□□□□ 0.46
APTX-229ENST00000489583 PAQR8Q8TEZ7 354 aa17.93■□□□□ 0.46
APTX-229ENST00000489583 ANKRD9Q96BM1 317 aaPredicted RBP17.93■□□□□ 0.46
APTX-229ENST00000489583 PPWD1Q96BP3 646 aaKnown RBP17.93■□□□□ 0.46
APTX-229ENST00000489583 FBXL20Q96IG2 436 aa17.93■□□□□ 0.46
APTX-229ENST00000489583 GPR22Q99680 433 aa17.93■□□□□ 0.46
APTX-229ENST00000489583 RBBP8Q99708 897 aa17.93■□□□□ 0.46
APTX-229ENST00000489583 ALG9Q9H6U8 611 aa17.93■□□□□ 0.46
APTX-229ENST00000489583 L2HGDHQ9H9P8 463 aa17.93■□□□□ 0.46
APTX-229ENST00000489583 SAYSD1Q9NPB0 183 aa17.93■□□□□ 0.46
APTX-229ENST00000489583 L3MBTL1Q9Y468 752 aa17.93■□□□□ 0.46
APTX-229ENST00000489583 HCFC1P51610 2035 aa17.93■□□□□ 0.46
APTX-229ENST00000489583 FAM221AA4D161 298 aa17.92■□□□□ 0.46
APTX-229ENST00000489583 SYCE1LA8MT33 242 aa17.92■□□□□ 0.46
APTX-229ENST00000489583 E7ESA3 106 aa17.92■□□□□ 0.46
APTX-229ENST00000489583 K7EPI3 171 aa17.92■□□□□ 0.46
APTX-229ENST00000489583 FGF17O60258 216 aa17.92■□□□□ 0.46
APTX-229ENST00000489583 CTAG2O75638 210 aa17.92■□□□□ 0.46
APTX-229ENST00000489583 TBX6O95947 436 aaPredicted RBP17.92■□□□□ 0.46
APTX-229ENST00000489583 IL2RAP01589 272 aa17.92■□□□□ 0.46
APTX-229ENST00000489583 BMP5P22003 454 aa17.92■□□□□ 0.46
APTX-229ENST00000489583 TMED10P49755 219 aaKnown RBP17.92■□□□□ 0.46
APTX-229ENST00000489583 DGKQP52824 942 aa17.92■□□□□ 0.46
APTX-229ENST00000489583 MRPS25P82663 173 aaKnown RBP17.92■□□□□ 0.46
APTX-229ENST00000489583 ZNF267Q14586 743 aaPredicted RBP17.92■□□□□ 0.46
APTX-229ENST00000489583 SLMAPQ14BN4 828 aa17.92■□□□□ 0.46
APTX-229ENST00000489583 ZNF791Q3KP31 576 aaPredicted RBP17.92■□□□□ 0.46
APTX-229ENST00000489583 RTL6Q6ICC9 239 aa17.92■□□□□ 0.46
APTX-229ENST00000489583 LAS2Q8IYD9 372 aa17.92■□□□□ 0.46
APTX-229ENST00000489583 PM20D2Q8IYS1 436 aa17.92■□□□□ 0.46
APTX-229ENST00000489583 ST13P4Q8IZP2 240 aaPredicted RBP17.92■□□□□ 0.46
APTX-229ENST00000489583 OR7G3Q8NG95 312 aa17.92■□□□□ 0.46
APTX-229ENST00000489583 NEIL3Q8TAT5 605 aa17.92■□□□□ 0.46
APTX-229ENST00000489583 RIT1Q92963 219 aa17.92■□□□□ 0.46
APTX-229ENST00000489583 ZNF597Q96LX8 424 aa17.92■□□□□ 0.46
APTX-229ENST00000489583 OR51B5Q9H339 312 aa17.92■□□□□ 0.46
APTX-229ENST00000489583 ZNF703Q9H7S9 590 aaPredicted RBP17.92■□□□□ 0.46
APTX-229ENST00000489583 ACKR4Q9NPB9 350 aa17.92■□□□□ 0.46
APTX-229ENST00000489583 CCM2LQ9NUG4 571 aaPredicted RBP17.92■□□□□ 0.46
APTX-229ENST00000489583 WHRNQ9P202 907 aa17.92■□□□□ 0.46
APTX-229ENST00000489583 FOXD3Q9UJU5 478 aaPredicted RBP17.92■□□□□ 0.46
APTX-229ENST00000489583 SNX24Q9Y343 169 aa17.92■□□□□ 0.46
APTX-229ENST00000489583 PCDHGA11Q9Y5H2 935 aa17.92■□□□□ 0.46
APTX-229ENST00000489583 ZNF407Q9C0G0 2248 aa17.91■□□□□ 0.46
APTX-229ENST00000489583 OR6C76A6NM76 312 aa17.91■□□□□ 0.46
APTX-229ENST00000489583 AHRRA9YTQ3 701 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms