RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 TBCDQ9BTW9 1192 aa10.84□□□□□ -0.67
ACTN4-206ENST00000489451 TMUB1Q9BVT8 246 aa10.84□□□□□ -0.67
ACTN4-206ENST00000489451 ALG9Q9H6U8 611 aa10.84□□□□□ -0.67
ACTN4-206ENST00000489451 ZNF703Q9H7S9 590 aaPredicted RBP10.84□□□□□ -0.67
ACTN4-206ENST00000489451 CNOT10Q9H9A5 744 aaKnown RBP10.84□□□□□ -0.67
ACTN4-206ENST00000489451 KCNJ16Q9NPI9 418 aa10.84□□□□□ -0.67
ACTN4-206ENST00000489451 SACM1LQ9NTJ5 587 aa10.84□□□□□ -0.67
ACTN4-206ENST00000489451 MTRF1LQ9UGC7 380 aaKnown RBP10.84□□□□□ -0.67
ACTN4-206ENST00000489451 RNF112Q9ULX5 631 aa10.84□□□□□ -0.67
ACTN4-206ENST00000489451 L3MBTL1Q9Y468 752 aa10.84□□□□□ -0.67
ACTN4-206ENST00000489451 VPS13CQ709C8 3753 aa10.84□□□□□ -0.67
ACTN4-206ENST00000489451 ATP6AP2A0A1C7CYW4 349 aa10.83□□□□□ -0.68
ACTN4-206ENST00000489451 SYNDIG1LA6NDD5 238 aa10.83□□□□□ -0.68
ACTN4-206ENST00000489451 LRRC14BA6NHZ5 514 aa10.83□□□□□ -0.68
ACTN4-206ENST00000489451 PLPP1O14494 284 aa10.83□□□□□ -0.68
ACTN4-206ENST00000489451 BCKDKO14874 412 aa10.83□□□□□ -0.68
ACTN4-206ENST00000489451 ATP6AP2O75787 350 aa10.83□□□□□ -0.68
ACTN4-206ENST00000489451 PCNAP12004 261 aa10.83□□□□□ -0.68
ACTN4-206ENST00000489451 PHBP35232 272 aa10.83□□□□□ -0.68
ACTN4-206ENST00000489451 SPRP35270 261 aaPredicted RBP10.83□□□□□ -0.68
ACTN4-206ENST00000489451 STT3AP46977 705 aa10.83□□□□□ -0.68
ACTN4-206ENST00000489451 ART1P52961 327 aa10.83□□□□□ -0.68
ACTN4-206ENST00000489451 SLC7A5Q01650 507 aa10.83□□□□□ -0.68
ACTN4-206ENST00000489451 FOLH1Q04609 750 aa10.83□□□□□ -0.68
ACTN4-206ENST00000489451 SLAMF1Q13291 335 aa10.83□□□□□ -0.68
ACTN4-206ENST00000489451 SNTB1Q13884 538 aaKnown RBP10.83□□□□□ -0.68
ACTN4-206ENST00000489451 TRADDQ15628 312 aa10.83□□□□□ -0.68
ACTN4-206ENST00000489451 MPEG1Q2M385 716 aa10.83□□□□□ -0.68
ACTN4-206ENST00000489451 GLE1Q53GS7 698 aaKnown RBP10.83□□□□□ -0.68
ACTN4-206ENST00000489451 DEPDC1Q5TB30 811 aa10.83□□□□□ -0.68
ACTN4-206ENST00000489451 GRTP1Q5TC63 336 aa10.83□□□□□ -0.68
ACTN4-206ENST00000489451 PRAMEF20Q5VT98 475 aa10.83□□□□□ -0.68
ACTN4-206ENST00000489451 KHDRBS2Q5VWX1 349 aaKnown RBP10.83□□□□□ -0.68
ACTN4-206ENST00000489451 MRM1Q6IN84 353 aaKnown RBP10.83□□□□□ -0.68
ACTN4-206ENST00000489451 MED27Q6P2C8 311 aa10.83□□□□□ -0.68
ACTN4-206ENST00000489451 PAOXQ6QHF9 649 aa10.83□□□□□ -0.68
ACTN4-206ENST00000489451 FAM47EQ6ZV65 393 aa10.83□□□□□ -0.68
ACTN4-206ENST00000489451 CENPLQ8N0S6 344 aaPredicted RBP10.83□□□□□ -0.68
ACTN4-206ENST00000489451 MMGT1Q8N4V1 131 aa10.83□□□□□ -0.68
ACTN4-206ENST00000489451 HUS1BQ8NHY5 278 aa10.83□□□□□ -0.68
ACTN4-206ENST00000489451 PAQR8Q8TEZ7 354 aa10.83□□□□□ -0.68
ACTN4-206ENST00000489451 SGCZQ96LD1 299 aa10.83□□□□□ -0.68
ACTN4-206ENST00000489451 MDFIQ99750 246 aa10.83□□□□□ -0.68
ACTN4-206ENST00000489451 DMRT3Q9NQL9 472 aa10.83□□□□□ -0.68
ACTN4-206ENST00000489451 NUDT4Q9NZJ9 180 aa10.83□□□□□ -0.68
ACTN4-206ENST00000489451 CHCHD2Q9Y6H1 151 aaPredicted RBP10.83□□□□□ -0.68
ACTN4-206ENST00000489451 PRRC2AP48634 2157 aaKnown RBP10.82□□□□□ -0.68
ACTN4-206ENST00000489451 ESYT3A0FGR9 886 aa10.82□□□□□ -0.68
ACTN4-206ENST00000489451 HMX2A2RU54 273 aa10.82□□□□□ -0.68
ACTN4-206ENST00000489451 FIGNL2A6NMB9 653 aa10.82□□□□□ -0.68
ACTN4-206ENST00000489451 K7EPI3 171 aa10.82□□□□□ -0.68
ACTN4-206ENST00000489451 TMPRSS11DO60235 418 aa10.82□□□□□ -0.68
ACTN4-206ENST00000489451 SUSD5O60279 629 aa10.82□□□□□ -0.68
ACTN4-206ENST00000489451 KERAO60938 352 aa10.82□□□□□ -0.68
ACTN4-206ENST00000489451 EEDO75530 441 aaKnown RBP10.82□□□□□ -0.68
ACTN4-206ENST00000489451 LRATO95237 230 aa10.82□□□□□ -0.68
ACTN4-206ENST00000489451 TNNI3P19429 210 aa10.82□□□□□ -0.68
ACTN4-206ENST00000489451 CPN2P22792 545 aa10.82□□□□□ -0.68
ACTN4-206ENST00000489451 DNAJA1P31689 397 aaKnown RBP10.82□□□□□ -0.68
ACTN4-206ENST00000489451 HPDP32754 393 aaPredicted RBP10.82□□□□□ -0.68
ACTN4-206ENST00000489451 SSR2P43308 183 aa10.82□□□□□ -0.68
ACTN4-206ENST00000489451 IRF9Q00978 393 aa10.82□□□□□ -0.68
ACTN4-206ENST00000489451 TNFRSF17Q02223 184 aa10.82□□□□□ -0.68
ACTN4-206ENST00000489451 TGM3Q08188 693 aa10.82□□□□□ -0.68
ACTN4-206ENST00000489451 NAB1Q13506 487 aa10.82□□□□□ -0.68
ACTN4-206ENST00000489451 LAPTM5Q13571 262 aa10.82□□□□□ -0.68
ACTN4-206ENST00000489451 RCN2Q14257 317 aa10.82□□□□□ -0.68
ACTN4-206ENST00000489451 KBTBD12Q3ZCT8 623 aa10.82□□□□□ -0.68
ACTN4-206ENST00000489451 TMEM35AQ53FP2 167 aa10.82□□□□□ -0.68
ACTN4-206ENST00000489451 PAGE2BQ5JRK9 111 aa10.82□□□□□ -0.68
ACTN4-206ENST00000489451 UBAP2Q5T6F2 1119 aaKnown RBP10.82□□□□□ -0.68
ACTN4-206ENST00000489451 FAM219BQ5XKK7 198 aa10.82□□□□□ -0.68
ACTN4-206ENST00000489451 OR4C11Q6IEV9 310 aa10.82□□□□□ -0.68
ACTN4-206ENST00000489451 GRHL2Q6ISB3 625 aa10.82□□□□□ -0.68
ACTN4-206ENST00000489451 OPN5Q6U736 354 aa10.82□□□□□ -0.68
ACTN4-206ENST00000489451 ZDHHC24Q6UX98 284 aa10.82□□□□□ -0.68
ACTN4-206ENST00000489451 B3GNT6Q6ZMB0 384 aa10.82□□□□□ -0.68
ACTN4-206ENST00000489451 ACAD11Q709F0 780 aa10.82□□□□□ -0.68
ACTN4-206ENST00000489451 LRRC25Q8N386 305 aaPredicted RBP10.82□□□□□ -0.68
ACTN4-206ENST00000489451 PPM1NQ8N819 430 aa10.82□□□□□ -0.68
ACTN4-206ENST00000489451 RELL2Q8NC24 303 aaPredicted RBP10.82□□□□□ -0.68
ACTN4-206ENST00000489451 NAXEQ8NCW5 288 aa10.82□□□□□ -0.68
ACTN4-206ENST00000489451 OR10G3Q8NGC4 313 aa10.82□□□□□ -0.68
ACTN4-206ENST00000489451 SPATA3Q8NHX4 192 aa10.82□□□□□ -0.68
ACTN4-206ENST00000489451 SPACA9Q96E40 222 aaPredicted RBP10.82□□□□□ -0.68
ACTN4-206ENST00000489451 FBXL20Q96IG2 436 aa10.82□□□□□ -0.68
ACTN4-206ENST00000489451 ROGDIQ9GZN7 287 aa10.82□□□□□ -0.68
ACTN4-206ENST00000489451 SLC6A15Q9H2J7 730 aa10.82□□□□□ -0.68
ACTN4-206ENST00000489451 LIME1Q9H400 295 aa10.82□□□□□ -0.68
ACTN4-206ENST00000489451 KCNN3Q9UGI6 736 aa10.82□□□□□ -0.68
ACTN4-206ENST00000489451 CNOT11Q9UKZ1 510 aaKnown RBP10.82□□□□□ -0.68
ACTN4-206ENST00000489451 ASB4Q9Y574 426 aa10.82□□□□□ -0.68
ACTN4-206ENST00000489451 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.82□□□□□ -0.68
ACTN4-206ENST00000489451 A0A0A6YYD5 115 aa10.81□□□□□ -0.68
ACTN4-206ENST00000489451 TRGV5A0A0B4J1U4 118 aa10.81□□□□□ -0.68
ACTN4-206ENST00000489451 A0A1W2PR48 441 aa10.81□□□□□ -0.68
ACTN4-206ENST00000489451 FOXO6A8MYZ6 492 aa10.81□□□□□ -0.68
ACTN4-206ENST00000489451 SUPT3HB4E1H0 165 aa10.81□□□□□ -0.68
ACTN4-206ENST00000489451 SUPT3HO75486 399 aa10.81□□□□□ -0.68
ACTN4-206ENST00000489451 P04436 131 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms