RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 MMP24Q9Y5R2 645 aa6.78□□□□□ -1.32
EXOSC3-206ENST00000489414 MAD1L1Q9Y6D9 718 aa6.78□□□□□ -1.32
EXOSC3-206ENST00000489414 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 ARHGAP42A6NI28 874 aa6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 ERI2A8K979 691 aaKnown RBP6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 FGF10O15520 208 aaPredicted RBP6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 PSMD3O43242 534 aa6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 MFSD11O43934 449 aa6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 UGT1A9O60656 530 aa6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 ULK1O75385 1050 aa6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 TNFSF13O75888 250 aa6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 RCBTB2O95199 551 aa6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 MLNP12872 115 aa6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 POU2F1P14859 743 aa6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 ERCC2P18074 760 aa6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 SSTR1P30872 391 aa6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 ELK3P41970 407 aa6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 GRIA3P42263 894 aa6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 SLC6A12P48065 614 aa6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 SEC24CP53992 1094 aa6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 SLC18A1P54219 525 aa6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 DVL1P1P54792 670 aaPredicted RBP6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 SPARCL1Q14515 664 aa6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 PRPSAP1Q14558 356 aa6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 ZNHIT3Q15649 155 aaPredicted RBP6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 PARP6Q2NL67 630 aa6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 ZNF672Q499Z4 452 aaPredicted RBP6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 SFT2D3Q587I9 215 aa6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 ANKRD20A2Q5SQ80 823 aa6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 ANKRD20A1Q5TYW2 823 aa6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 HHATQ5VTY9 493 aa6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 ANKRD20A3Q5VUR7 823 aa6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 C17orf107Q6ZR85 190 aa6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 CCDC121Q6ZUS5 278 aa6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 TRABD2AQ86V40 505 aa6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 CTAGE3PQ8IX95 158 aa6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 PM20D2Q8IYS1 436 aa6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 SVOPQ8N4V2 548 aa6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 LINC01356Q8N9X3 169 aa6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 CCDC197Q8NCU1 140 aa6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 MGARPQ8TDB4 240 aa6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 SLC44A1Q8WWI5 657 aa6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 MRRFQ96E11 262 aaKnown RBP6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 CABS1Q96KC9 395 aa6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 OLFM3Q96PB7 478 aa6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 PAFAH2Q99487 392 aa6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 VAT1Q99536 393 aa6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 SLC6A7Q99884 636 aa6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 NTMT1Q9BV86 223 aa6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 C1QTNF5Q9BXJ0 243 aa6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 CACNG6Q9BXT2 260 aa6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 IQCGQ9H095 443 aaKnown RBP6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 ZNF703Q9H7S9 590 aaPredicted RBP6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 SSU72Q9NP77 194 aaKnown RBP6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 ACKR4Q9NPB9 350 aa6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 ELOVL5Q9NYP7 299 aa6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 KLHL8Q9P2G9 620 aaPredicted RBP6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 CTNNAL1Q9UBT7 734 aa6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 CDC14AQ9UNH5 594 aa6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 RNF115Q9Y4L5 304 aa6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 SPEF1Q9Y4P9 236 aa6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 PPIAL4AQ9Y536 164 aa6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 TEX264Q9Y6I9 313 aa6.77□□□□□ -1.33
EXOSC3-206ENST00000489414 PLECQ15149 4684 aaKnown RBP6.76□□□□□ -1.33
EXOSC3-206ENST00000489414 TCRBV7S3A2A0A539 114 aa6.76□□□□□ -1.33
EXOSC3-206ENST00000489414 MGAT4DA6NG13 374 aa6.76□□□□□ -1.33
EXOSC3-206ENST00000489414 SDR42E2A6NKP2 422 aa6.76□□□□□ -1.33
EXOSC3-206ENST00000489414 OR2AG2A6NM03 316 aa6.76□□□□□ -1.33
EXOSC3-206ENST00000489414 SRPX2O60687 465 aaPredicted RBP6.76□□□□□ -1.33
EXOSC3-206ENST00000489414 BANF1O75531 89 aa6.76□□□□□ -1.33
EXOSC3-206ENST00000489414 CA4P22748 312 aa6.76□□□□□ -1.33
EXOSC3-206ENST00000489414 TLX1P31314 330 aaPredicted RBP6.76□□□□□ -1.33
EXOSC3-206ENST00000489414 SERPINB9P50453 376 aa6.76□□□□□ -1.33
EXOSC3-206ENST00000489414 GPX6P59796 221 aa6.76□□□□□ -1.33
EXOSC3-206ENST00000489414 MAXP61244 160 aa6.76□□□□□ -1.33
EXOSC3-206ENST00000489414 IL10RBQ08334 325 aa6.76□□□□□ -1.33
EXOSC3-206ENST00000489414 SLC10A2Q12908 348 aaPredicted RBP6.76□□□□□ -1.33
EXOSC3-206ENST00000489414 NAB1Q13506 487 aa6.76□□□□□ -1.33
EXOSC3-206ENST00000489414 QPCTQ16769 361 aa6.76□□□□□ -1.33
EXOSC3-206ENST00000489414 RNF187Q5TA31 235 aaPredicted RBP6.76□□□□□ -1.33
EXOSC3-206ENST00000489414 KCTD11Q693B1 232 aa6.76□□□□□ -1.33
EXOSC3-206ENST00000489414 ANKRD34AQ69YU3 496 aa6.76□□□□□ -1.33
EXOSC3-206ENST00000489414 DESI1Q6ICB0 168 aa6.76□□□□□ -1.33
EXOSC3-206ENST00000489414 CASC4Q6P4E1 433 aa6.76□□□□□ -1.33
EXOSC3-206ENST00000489414 TMEM220Q6QAJ8 160 aa6.76□□□□□ -1.33
EXOSC3-206ENST00000489414 PID1Q7Z2X4 250 aa6.76□□□□□ -1.33
EXOSC3-206ENST00000489414 LRRC6Q86X45 466 aa6.76□□□□□ -1.33
EXOSC3-206ENST00000489414 LRRC49Q8IUZ0 686 aa6.76□□□□□ -1.33
EXOSC3-206ENST00000489414 LILRA3Q8N6C8 439 aaPredicted RBP6.76□□□□□ -1.33
EXOSC3-206ENST00000489414 OTUD6BQ8N6M0 293 aa6.76□□□□□ -1.33
EXOSC3-206ENST00000489414 OR2L2Q8NH16 312 aa6.76□□□□□ -1.33
EXOSC3-206ENST00000489414 MUC7Q8TAX7 377 aa6.76□□□□□ -1.33
EXOSC3-206ENST00000489414 GSDMBQ8TAX9 411 aa6.76□□□□□ -1.33
EXOSC3-206ENST00000489414 ZPLD1Q8TCW7 415 aa6.76□□□□□ -1.33
EXOSC3-206ENST00000489414 BRSK1Q8TDC3 778 aa6.76□□□□□ -1.33
EXOSC3-206ENST00000489414 CDKL2Q92772 493 aa6.76□□□□□ -1.33
EXOSC3-206ENST00000489414 TAF15Q92804 592 aaKnown RBP eCLIP6.76□□□□□ -1.33
EXOSC3-206ENST00000489414 PPP1R14AQ96A00 147 aa6.76□□□□□ -1.33
EXOSC3-206ENST00000489414 INTS12Q96CB8 462 aaKnown RBP6.76□□□□□ -1.33
EXOSC3-206ENST00000489414 MTBPQ96DY7 904 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms