RNA–Protein interactions for RNA: ENST00000489240.1

C9orf16-203, Transcript of chromosome 9 open reading frame 16, humanhuman

TSL 3

Gene C9orf16, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf16-203ENST00000489240 VWA2Q5GFL6 755 aa17.11■□□□□ 0.33
C9orf16-203ENST00000489240 MLIPQ5VWP3 458 aa17.11■□□□□ 0.33
C9orf16-203ENST00000489240 IGF2-ASQ6U949 168 aa17.11■□□□□ 0.33
C9orf16-203ENST00000489240 HACD2Q6Y1H2 254 aa17.11■□□□□ 0.33
C9orf16-203ENST00000489240 ZNF517Q6ZMY9 492 aaPredicted RBP17.11■□□□□ 0.33
C9orf16-203ENST00000489240 QSOX2Q6ZRP7 698 aa17.11■□□□□ 0.33
C9orf16-203ENST00000489240 ANKRD46Q86W74 232 aa17.11■□□□□ 0.33
C9orf16-203ENST00000489240 MARCH9Q86YJ5 346 aa17.11■□□□□ 0.33
C9orf16-203ENST00000489240 OR4N5Q8IXE1 308 aa17.11■□□□□ 0.33
C9orf16-203ENST00000489240 SHISA5Q8N114 240 aa17.11■□□□□ 0.33
C9orf16-203ENST00000489240 LRRC25Q8N386 305 aaPredicted RBP17.11■□□□□ 0.33
C9orf16-203ENST00000489240 STT3BQ8TCJ2 826 aa17.11■□□□□ 0.33
C9orf16-203ENST00000489240 ANKRD9Q96BM1 317 aaPredicted RBP17.11■□□□□ 0.33
C9orf16-203ENST00000489240 CNRIP1Q96F85 164 aaPredicted RBP17.11■□□□□ 0.33
C9orf16-203ENST00000489240 ZNF681Q96N22 645 aa17.11■□□□□ 0.33
C9orf16-203ENST00000489240 SLC46A1Q96NT5 459 aa17.11■□□□□ 0.33
C9orf16-203ENST00000489240 PANX1Q96RD7 426 aa17.11■□□□□ 0.33
C9orf16-203ENST00000489240 NRSN2Q9GZP1 204 aa17.11■□□□□ 0.33
C9orf16-203ENST00000489240 WDR54Q9H977 334 aa17.11■□□□□ 0.33
C9orf16-203ENST00000489240 SERHLQ9NQF3 203 aa17.11■□□□□ 0.33
C9orf16-203ENST00000489240 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.11■□□□□ 0.33
C9orf16-203ENST00000489240 FOXJ2Q9P0K8 574 aa17.11■□□□□ 0.33
C9orf16-203ENST00000489240 MAP10Q9P2G4 905 aa17.11■□□□□ 0.33
C9orf16-203ENST00000489240 CTSFQ9UBX1 484 aa17.11■□□□□ 0.33
C9orf16-203ENST00000489240 NXT1Q9UKK6 140 aaKnown RBP17.11■□□□□ 0.33
C9orf16-203ENST00000489240 PCDHGA7Q9Y5G6 932 aa17.11■□□□□ 0.33
C9orf16-203ENST00000489240 A0A096LPI6 279 aa17.1■□□□□ 0.33
C9orf16-203ENST00000489240 ANP32DO95626 131 aa17.1■□□□□ 0.33
C9orf16-203ENST00000489240 CPSF4O95639 269 aaKnown RBP17.1■□□□□ 0.33
C9orf16-203ENST00000489240 C6orf47O95873 294 aa17.1■□□□□ 0.33
C9orf16-203ENST00000489240 ZGLP1P0C6A0 271 aa17.1■□□□□ 0.33
C9orf16-203ENST00000489240 CPMP14384 443 aa17.1■□□□□ 0.33
C9orf16-203ENST00000489240 EFNA1P20827 205 aaPredicted RBP17.1■□□□□ 0.33
C9orf16-203ENST00000489240 NCBP2P52298 156 aaKnown RBP eCLIP17.1■□□□□ 0.33
C9orf16-203ENST00000489240 BTG2P78543 158 aa17.1■□□□□ 0.33
C9orf16-203ENST00000489240 IGLV3-21P80748 117 aaPredicted RBP17.1■□□□□ 0.33
C9orf16-203ENST00000489240 PLIN5Q00G26 463 aa17.1■□□□□ 0.33
C9orf16-203ENST00000489240 SERTAD2Q14140 314 aa17.1■□□□□ 0.33
C9orf16-203ENST00000489240 PUM1Q14671 1186 aaKnown RBP eCLIP17.1■□□□□ 0.33
C9orf16-203ENST00000489240 TRMT5Q32P41 509 aaKnown RBP17.1■□□□□ 0.33
C9orf16-203ENST00000489240 LCN10Q6JVE6 187 aa17.1■□□□□ 0.33
C9orf16-203ENST00000489240 FAM180BQ6P0A1 224 aa17.1■□□□□ 0.33
C9orf16-203ENST00000489240 DHDDSQ86SQ9 333 aa17.1■□□□□ 0.33
C9orf16-203ENST00000489240 SCUBE1Q8IWY4 988 aa17.1■□□□□ 0.33
C9orf16-203ENST00000489240 CCDC116Q8IYX3 515 aa17.1■□□□□ 0.33
C9orf16-203ENST00000489240 CLECL1Q8IZS7 167 aa17.1■□□□□ 0.33
C9orf16-203ENST00000489240 ESX1Q8N693 406 aa17.1■□□□□ 0.33
C9orf16-203ENST00000489240 OR4A15Q8NGL6 344 aa17.1■□□□□ 0.33
C9orf16-203ENST00000489240 GOT1L1Q8NHS2 421 aaPredicted RBP17.1■□□□□ 0.33
C9orf16-203ENST00000489240 PTCHD1Q96NR3 888 aa17.1■□□□□ 0.33
C9orf16-203ENST00000489240 AMDHD1Q96NU7 426 aa17.1■□□□□ 0.33
C9orf16-203ENST00000489240 PELOQ9BRX2 385 aaKnown RBP17.1■□□□□ 0.33
C9orf16-203ENST00000489240 C1orf21Q9H246 121 aa17.1■□□□□ 0.33
C9orf16-203ENST00000489240 CHST8Q9H2A9 424 aa17.1■□□□□ 0.33
C9orf16-203ENST00000489240 GLIPR2Q9H4G4 154 aa17.1■□□□□ 0.33
C9orf16-203ENST00000489240 NEUROD4Q9HD90 331 aa17.1■□□□□ 0.33
C9orf16-203ENST00000489240 TAS2R9Q9NYW1 312 aa17.1■□□□□ 0.33
C9orf16-203ENST00000489240 MKL2Q9ULH7 1088 aa17.1■□□□□ 0.33
C9orf16-203ENST00000489240 CNOT1A5YKK6 2376 aaKnown RBP17.09■□□□□ 0.33
C9orf16-203ENST00000489240 TEX51A0A1B0GUA7 166 aa17.09■□□□□ 0.33
C9orf16-203ENST00000489240 VSTM2BA6NLU5 285 aa17.09■□□□□ 0.33
C9orf16-203ENST00000489240 CYC1P08574 325 aa17.09■□□□□ 0.33
C9orf16-203ENST00000489240 ZCCHC18P0CG32 403 aa17.09■□□□□ 0.33
C9orf16-203ENST00000489240 SLC35E2P0CK97 266 aa17.09■□□□□ 0.33
C9orf16-203ENST00000489240 SLC5A2P31639 672 aa17.09■□□□□ 0.33
C9orf16-203ENST00000489240 ID2Q02363 134 aa17.09■□□□□ 0.33
C9orf16-203ENST00000489240 NKG7Q16617 165 aa17.09■□□□□ 0.33
C9orf16-203ENST00000489240 LRIF1Q5T3J3 769 aa17.09■□□□□ 0.33
C9orf16-203ENST00000489240 MRPL14Q6P1L8 145 aaKnown RBP17.09■□□□□ 0.33
C9orf16-203ENST00000489240 FAM199XQ6PEV8 388 aaPredicted RBP17.09■□□□□ 0.33
C9orf16-203ENST00000489240 C16orf89Q6UX73 402 aa17.09■□□□□ 0.33
C9orf16-203ENST00000489240 RINLQ6ZS11 566 aa17.09■□□□□ 0.33
C9orf16-203ENST00000489240 TRIML2Q8N7C3 387 aa17.09■□□□□ 0.33
C9orf16-203ENST00000489240 INPP5KQ9BT40 448 aa17.09■□□□□ 0.33
C9orf16-203ENST00000489240 ALOXE3Q9BYJ1 711 aa17.09■□□□□ 0.33
C9orf16-203ENST00000489240 PAIP1Q9H074 479 aaKnown RBP17.09■□□□□ 0.33
C9orf16-203ENST00000489240 AKIRIN1Q9H9L7 192 aaPredicted RBP17.09■□□□□ 0.33
C9orf16-203ENST00000489240 SLAMF7Q9NQ25 335 aa17.09■□□□□ 0.33
C9orf16-203ENST00000489240 SEMA3GQ9NS98 782 aa17.09■□□□□ 0.33
C9orf16-203ENST00000489240 CROTQ9UKG9 612 aa17.09■□□□□ 0.33
C9orf16-203ENST00000489240 VPS4AQ9UN37 437 aa17.09■□□□□ 0.33
C9orf16-203ENST00000489240 ERICH4A6NGS2 130 aa17.08■□□□□ 0.32
C9orf16-203ENST00000489240 CDRT15L2A8MXV6 281 aa17.08■□□□□ 0.32
C9orf16-203ENST00000489240 STMND1H3BQB6 276 aa17.08■□□□□ 0.32
C9orf16-203ENST00000489240 ATP1B1P05026 303 aa17.08■□□□□ 0.32
C9orf16-203ENST00000489240 ABCB1P08183 1280 aaPredicted RBP17.08■□□□□ 0.32
C9orf16-203ENST00000489240 MAOAP21397 527 aa17.08■□□□□ 0.32
C9orf16-203ENST00000489240 PTPN4P29074 926 aa17.08■□□□□ 0.32
C9orf16-203ENST00000489240 GPC1P35052 558 aa17.08■□□□□ 0.32
C9orf16-203ENST00000489240 PLA2G5P39877 138 aa17.08■□□□□ 0.32
C9orf16-203ENST00000489240 HBA1P69905 142 aa17.08■□□□□ 0.32
C9orf16-203ENST00000489240 RHAGQ02094 409 aa17.08■□□□□ 0.32
C9orf16-203ENST00000489240 HSPB3Q12988 150 aa17.08■□□□□ 0.32
C9orf16-203ENST00000489240 ZNF750Q32MQ0 723 aa17.08■□□□□ 0.32
C9orf16-203ENST00000489240 FAM198BQ6UWH4 519 aa17.08■□□□□ 0.32
C9orf16-203ENST00000489240 ZNF621Q6ZSS3 439 aa17.08■□□□□ 0.32
C9orf16-203ENST00000489240 ZNF551Q7Z340 670 aaPredicted RBP17.08■□□□□ 0.32
C9orf16-203ENST00000489240 TIPARPQ7Z3E1 657 aaKnown RBP17.08■□□□□ 0.32
C9orf16-203ENST00000489240 PRSS58Q8IYP2 241 aa17.08■□□□□ 0.32
C9orf16-203ENST00000489240 ST13P4Q8IZP2 240 aaPredicted RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms