RNA–Protein interactions for RNA: ENST00000489230.1

COL4A5-206, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-206ENST00000489230 OR14A16Q8NHC5 309 aa11.65□□□□□ -0.54
COL4A5-206ENST00000489230 DNAJB14Q8TBM8 379 aa11.65□□□□□ -0.54
COL4A5-206ENST00000489230 PIWIL2Q8TC59 973 aaKnown RBP11.65□□□□□ -0.54
COL4A5-206ENST00000489230 CKAP2Q8WWK9 683 aa11.65□□□□□ -0.54
COL4A5-206ENST00000489230 TSLPQ969D9 159 aa11.65□□□□□ -0.54
COL4A5-206ENST00000489230 ART5Q96L15 291 aa11.65□□□□□ -0.54
COL4A5-206ENST00000489230 C7orf26Q96N11 449 aa11.65□□□□□ -0.54
COL4A5-206ENST00000489230 AGAP4Q96P64 663 aa11.65□□□□□ -0.54
COL4A5-206ENST00000489230 LMF1Q96S06 567 aa11.65□□□□□ -0.54
COL4A5-206ENST00000489230 CSF3RQ99062 836 aa11.65□□□□□ -0.54
COL4A5-206ENST00000489230 SLC25A23Q9BV35 468 aa11.65□□□□□ -0.54
COL4A5-206ENST00000489230 MMP25Q9NPA2 562 aa11.65□□□□□ -0.54
COL4A5-206ENST00000489230 PNO1Q9NRX1 252 aaKnown RBP11.65□□□□□ -0.54
COL4A5-206ENST00000489230 RYDENQ9NUL5 291 aaKnown RBP11.65□□□□□ -0.54
COL4A5-206ENST00000489230 GIMAP4Q9NUV9 329 aa11.65□□□□□ -0.54
COL4A5-206ENST00000489230 PNPOQ9NVS9 261 aa11.65□□□□□ -0.54
COL4A5-206ENST00000489230 TAS2R7Q9NYW3 318 aa11.65□□□□□ -0.54
COL4A5-206ENST00000489230 PPIEQ9UNP9 301 aaKnown RBP11.65□□□□□ -0.54
COL4A5-206ENST00000489230 PIEZO2Q9H5I5 2752 aa11.64□□□□□ -0.55
COL4A5-206ENST00000489230 SAGE2PA6NJ88 616 aa11.64□□□□□ -0.55
COL4A5-206ENST00000489230 A6NL46 340 aa11.64□□□□□ -0.55
COL4A5-206ENST00000489230 OR10H2O60403 315 aa11.64□□□□□ -0.55
COL4A5-206ENST00000489230 LDB3O75112 727 aa11.64□□□□□ -0.55
COL4A5-206ENST00000489230 PEX11AO75192 247 aa11.64□□□□□ -0.55
COL4A5-206ENST00000489230 SEC24DO94855 1032 aaPredicted RBP11.64□□□□□ -0.55
COL4A5-206ENST00000489230 TGDSO95455 350 aa11.64□□□□□ -0.55
COL4A5-206ENST00000489230 PORP16435 677 aaPredicted RBP11.64□□□□□ -0.55
COL4A5-206ENST00000489230 DDCP20711 480 aa11.64□□□□□ -0.55
COL4A5-206ENST00000489230 MPIP34949 423 aa11.64□□□□□ -0.55
COL4A5-206ENST00000489230 HNRNPFP52597 415 aaKnown RBP11.64□□□□□ -0.55
COL4A5-206ENST00000489230 FOLH1Q04609 750 aa11.64□□□□□ -0.55
COL4A5-206ENST00000489230 BTBD16Q32M84 506 aa11.64□□□□□ -0.55
COL4A5-206ENST00000489230 RFTN2Q52LD8 501 aaPredicted RBP11.64□□□□□ -0.55
COL4A5-206ENST00000489230 TCTN3Q6NUS6 607 aa11.64□□□□□ -0.55
COL4A5-206ENST00000489230 RGS9BPQ6ZS82 235 aa11.64□□□□□ -0.55
COL4A5-206ENST00000489230 LANCL3Q6ZV70 420 aa11.64□□□□□ -0.55
COL4A5-206ENST00000489230 R3HCC1LQ7Z5L2 792 aaKnown RBP11.64□□□□□ -0.55
COL4A5-206ENST00000489230 CLNKQ7Z7G1 428 aa11.64□□□□□ -0.55
COL4A5-206ENST00000489230 WDR75Q8IWA0 830 aaKnown RBP11.64□□□□□ -0.55
COL4A5-206ENST00000489230 NATD1Q8N6N6 113 aa11.64□□□□□ -0.55
COL4A5-206ENST00000489230 FNDC5Q8NAU1 212 aa11.64□□□□□ -0.55
COL4A5-206ENST00000489230 TMEM52Q8NDY8 209 aa11.64□□□□□ -0.55
COL4A5-206ENST00000489230 B3GNT7Q8NFL0 401 aa11.64□□□□□ -0.55
COL4A5-206ENST00000489230 TM9SF4Q92544 642 aa11.64□□□□□ -0.55
COL4A5-206ENST00000489230 MTERF3Q96E29 417 aa11.64□□□□□ -0.55
COL4A5-206ENST00000489230 THOC3Q96J01 351 aaKnown RBP11.64□□□□□ -0.55
COL4A5-206ENST00000489230 FCRL1Q96LA6 429 aa11.64□□□□□ -0.55
COL4A5-206ENST00000489230 PRPF18Q99633 342 aaKnown RBP11.64□□□□□ -0.55
COL4A5-206ENST00000489230 WDR77Q9BQA1 342 aaPredicted RBP11.64□□□□□ -0.55
COL4A5-206ENST00000489230 MEAF6Q9HAF1 191 aa11.64□□□□□ -0.55
COL4A5-206ENST00000489230 MYNNQ9NPC7 610 aa11.64□□□□□ -0.55
COL4A5-206ENST00000489230 MIEF1Q9NQG6 463 aa11.64□□□□□ -0.55
COL4A5-206ENST00000489230 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.64□□□□□ -0.55
COL4A5-206ENST00000489230 TEX10Q9NXF1 929 aaPredicted RBP11.64□□□□□ -0.55
COL4A5-206ENST00000489230 GPR83Q9NYM4 423 aa11.64□□□□□ -0.55
COL4A5-206ENST00000489230 CES1P1Q9UKY3 287 aa11.64□□□□□ -0.55
COL4A5-206ENST00000489230 ZNF451Q9Y4E5 1061 aa11.64□□□□□ -0.55
COL4A5-206ENST00000489230 IGHV3-20A0A0C4DH32 117 aa11.63□□□□□ -0.55
COL4A5-206ENST00000489230 GLOD5A6NK44 160 aa11.63□□□□□ -0.55
COL4A5-206ENST00000489230 C17orf105B2RV13 164 aa11.63□□□□□ -0.55
COL4A5-206ENST00000489230 FGF17O60258 216 aa11.63□□□□□ -0.55
COL4A5-206ENST00000489230 SKAP2O75563 359 aaPredicted RBP11.63□□□□□ -0.55
COL4A5-206ENST00000489230 IL3P08700 152 aa11.63□□□□□ -0.55
COL4A5-206ENST00000489230 PRR35P0CG20 571 aa11.63□□□□□ -0.55
COL4A5-206ENST00000489230 LBPP18428 481 aa11.63□□□□□ -0.55
COL4A5-206ENST00000489230 ALDH9A1P49189 494 aa11.63□□□□□ -0.55
COL4A5-206ENST00000489230 CLCN2P51788 898 aa11.63□□□□□ -0.55
COL4A5-206ENST00000489230 PGDP52209 483 aa11.63□□□□□ -0.55
COL4A5-206ENST00000489230 EFNA3P52797 238 aa11.63□□□□□ -0.55
COL4A5-206ENST00000489230 SLC26A5P58743 744 aa11.63□□□□□ -0.55
COL4A5-206ENST00000489230 RPL38P63173 70 aaKnown RBP11.63□□□□□ -0.55
COL4A5-206ENST00000489230 PDCD2Q16342 344 aaPredicted RBP11.63□□□□□ -0.55
COL4A5-206ENST00000489230 CRB2Q5IJ48 1285 aa11.63□□□□□ -0.55
COL4A5-206ENST00000489230 C6orf163Q5TEZ5 329 aa11.63□□□□□ -0.55
COL4A5-206ENST00000489230 VWA5B1Q5TIE3 1220 aa11.63□□□□□ -0.55
COL4A5-206ENST00000489230 FAM71E1Q6IPT2 247 aa11.63□□□□□ -0.55
COL4A5-206ENST00000489230 SPATA19Q7Z5L4 167 aa11.63□□□□□ -0.55
COL4A5-206ENST00000489230 OR4N5Q8IXE1 308 aa11.63□□□□□ -0.55
COL4A5-206ENST00000489230 SHISA5Q8N114 240 aa11.63□□□□□ -0.55
COL4A5-206ENST00000489230 OR5L2Q8NGL0 311 aa11.63□□□□□ -0.55
COL4A5-206ENST00000489230 OR2T11Q8NH01 316 aa11.63□□□□□ -0.55
COL4A5-206ENST00000489230 C9orf43Q8TAL5 461 aaPredicted RBP11.63□□□□□ -0.55
COL4A5-206ENST00000489230 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.63□□□□□ -0.55
COL4A5-206ENST00000489230 PTPMT1Q8WUK0 201 aaPredicted RBP11.63□□□□□ -0.55
COL4A5-206ENST00000489230 RIT1Q92963 219 aa11.63□□□□□ -0.55
COL4A5-206ENST00000489230 VMP1Q96GC9 406 aa11.63□□□□□ -0.55
COL4A5-206ENST00000489230 ABHD17AQ96GS6 310 aa11.63□□□□□ -0.55
COL4A5-206ENST00000489230 ZNF354BQ96LW1 612 aa11.63□□□□□ -0.55
COL4A5-206ENST00000489230 C3orf30Q96M34 536 aa11.63□□□□□ -0.55
COL4A5-206ENST00000489230 EBPLQ9BY08 206 aa11.63□□□□□ -0.55
COL4A5-206ENST00000489230 AKTIPQ9H8T0 292 aa11.63□□□□□ -0.55
COL4A5-206ENST00000489230 KCNK13Q9HB14 408 aa11.63□□□□□ -0.55
COL4A5-206ENST00000489230 NOP53Q9NZM5 478 aaKnown RBP11.63□□□□□ -0.55
COL4A5-206ENST00000489230 COPS7AQ9UBW8 275 aa11.63□□□□□ -0.55
COL4A5-206ENST00000489230 UTS2RQ9UKP6 389 aa11.63□□□□□ -0.55
COL4A5-206ENST00000489230 POLR3HQ9Y535 204 aaPredicted RBP11.63□□□□□ -0.55
COL4A5-206ENST00000489230 CLDN16Q9Y5I7 305 aa11.63□□□□□ -0.55
COL4A5-206ENST00000489230 CCDC88CQ9P219 2028 aa11.62□□□□□ -0.55
COL4A5-206ENST00000489230 ATP6AP2A0A1C7CYW4 349 aa11.62□□□□□ -0.55
COL4A5-206ENST00000489230 A8MUA0 341 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms