RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 LILRA2Q8N149 483 aa12.01□□□□□ -0.49
NELFE-209ENST00000488426 CATSPER1Q8NEC5 780 aa12.01□□□□□ -0.49
NELFE-209ENST00000488426 ZFP28Q8NHY6 868 aa12.01□□□□□ -0.49
NELFE-209ENST00000488426 PSMA8Q8TAA3 256 aa12.01□□□□□ -0.49
NELFE-209ENST00000488426 ZDHHC12Q96GR4 267 aa12.01□□□□□ -0.49
NELFE-209ENST00000488426 PKP2Q99959 881 aa12.01□□□□□ -0.49
NELFE-209ENST00000488426 SH3GL3Q99963 347 aa12.01□□□□□ -0.49
NELFE-209ENST00000488426 TRIM4Q9C037 500 aa12.01□□□□□ -0.49
NELFE-209ENST00000488426 CHST8Q9H2A9 424 aa12.01□□□□□ -0.49
NELFE-209ENST00000488426 SLAMF7Q9NQ25 335 aa12.01□□□□□ -0.49
NELFE-209ENST00000488426 MS4A12Q9NXJ0 267 aa12.01□□□□□ -0.49
NELFE-209ENST00000488426 NLGN3Q9NZ94 848 aa12.01□□□□□ -0.49
NELFE-209ENST00000488426 UTS2RQ9UKP6 389 aa12.01□□□□□ -0.49
NELFE-209ENST00000488426 FBXW2Q9UKT8 454 aa12.01□□□□□ -0.49
NELFE-209ENST00000488426 PCDHGA1Q9Y5H4 931 aa12.01□□□□□ -0.49
NELFE-209ENST00000488426 SLC22A7Q9Y694 548 aa12.01□□□□□ -0.49
NELFE-209ENST00000488426 SLC9B1P1A6NJY1 282 aa12□□□□□ -0.49
NELFE-209ENST00000488426 SRPX2O60687 465 aaPredicted RBP12□□□□□ -0.49
NELFE-209ENST00000488426 CREG1O75629 220 aa12□□□□□ -0.49
NELFE-209ENST00000488426 EIF2S1P05198 315 aaKnown RBP12□□□□□ -0.49
NELFE-209ENST00000488426 NR2F6P10588 404 aa12□□□□□ -0.49
NELFE-209ENST00000488426 IL1RNP18510 177 aa12□□□□□ -0.49
NELFE-209ENST00000488426 ACP1P24666 158 aa12□□□□□ -0.49
NELFE-209ENST00000488426 SOAT1P35610 550 aa12□□□□□ -0.49
NELFE-209ENST00000488426 CHI3L1P36222 383 aaPredicted RBP12□□□□□ -0.49
NELFE-209ENST00000488426 BUD31P41223 144 aaPredicted RBP12□□□□□ -0.49
NELFE-209ENST00000488426 INSM1Q01101 510 aaPredicted RBP12□□□□□ -0.49
NELFE-209ENST00000488426 VEZF1Q14119 521 aa12□□□□□ -0.49
NELFE-209ENST00000488426 HES3Q5TGS1 186 aa12□□□□□ -0.49
NELFE-209ENST00000488426 SLC48A1Q6P1K1 146 aa12□□□□□ -0.49
NELFE-209ENST00000488426 TLDC1Q6P9B6 456 aa12□□□□□ -0.49
NELFE-209ENST00000488426 SLC35F3Q8IY50 421 aa12□□□□□ -0.49
NELFE-209ENST00000488426 DNAJC22Q8N4W6 341 aa12□□□□□ -0.49
NELFE-209ENST00000488426 TMEM102Q8N9M5 508 aaPredicted RBP12□□□□□ -0.49
NELFE-209ENST00000488426 ZCCHC10Q8TBK6 192 aa12□□□□□ -0.49
NELFE-209ENST00000488426 NCLNQ969V3 563 aa12□□□□□ -0.49
NELFE-209ENST00000488426 FAM162AQ96A26 154 aa12□□□□□ -0.49
NELFE-209ENST00000488426 MAP3K3Q99759 626 aa12□□□□□ -0.49
NELFE-209ENST00000488426 MAPKAP1Q9BPZ7 522 aa12□□□□□ -0.49
NELFE-209ENST00000488426 DUSP23Q9BVJ7 150 aa12□□□□□ -0.49
NELFE-209ENST00000488426 KLHL4Q9C0H6 718 aa12□□□□□ -0.49
NELFE-209ENST00000488426 LYRM4Q9HD34 91 aa12□□□□□ -0.49
NELFE-209ENST00000488426 FAM60AQ9NP50 221 aa12□□□□□ -0.49
NELFE-209ENST00000488426 OLAHQ9NV23 265 aa12□□□□□ -0.49
NELFE-209ENST00000488426 AURKCQ9UQB9 309 aa12□□□□□ -0.49
NELFE-209ENST00000488426 LRRC42Q9Y546 428 aa12□□□□□ -0.49
NELFE-209ENST00000488426 RNF103-CHMP3A0A140T963 221 aa12□□□□□ -0.49
NELFE-209ENST00000488426 NTRK1P04629 796 aa12□□□□□ -0.49
NELFE-209ENST00000488426 ALPPL2P10696 532 aa12□□□□□ -0.49
NELFE-209ENST00000488426 PEX2P28328 305 aa12□□□□□ -0.49
NELFE-209ENST00000488426 MVDP53602 400 aa12□□□□□ -0.49
NELFE-209ENST00000488426 VSX2P58304 361 aaPredicted RBP12□□□□□ -0.49
NELFE-209ENST00000488426 GPLD1P80108 840 aa12□□□□□ -0.49
NELFE-209ENST00000488426 TNFRSF17Q02223 184 aa12□□□□□ -0.49
NELFE-209ENST00000488426 DEFB134Q4QY38 66 aa12□□□□□ -0.49
NELFE-209ENST00000488426 FAM98BQ52LJ0 330 aaKnown RBP12□□□□□ -0.49
NELFE-209ENST00000488426 FAM92BQ6ZTR7 304 aa12□□□□□ -0.49
NELFE-209ENST00000488426 PTOV1Q86YD1 416 aa12□□□□□ -0.49
NELFE-209ENST00000488426 MCATQ8IVS2 390 aaKnown RBP12□□□□□ -0.49
NELFE-209ENST00000488426 EID3Q8N140 333 aa12□□□□□ -0.49
NELFE-209ENST00000488426 ADCY4Q8NFM4 1077 aa12□□□□□ -0.49
NELFE-209ENST00000488426 PNPT1Q8TCS8 783 aaKnown RBP12□□□□□ -0.49
NELFE-209ENST00000488426 UGT2B28Q9BY64 529 aa12□□□□□ -0.49
NELFE-209ENST00000488426 EPS8L2Q9H6S3 715 aa12□□□□□ -0.49
NELFE-209ENST00000488426 CXorf36Q9H7Y0 433 aa12□□□□□ -0.49
NELFE-209ENST00000488426 GIMAP4Q9NUV9 329 aa12□□□□□ -0.49
NELFE-209ENST00000488426 DCAF13Q9NV06 445 aaKnown RBP12□□□□□ -0.49
NELFE-209ENST00000488426 C5AR2Q9P296 337 aa12□□□□□ -0.49
NELFE-209ENST00000488426 CES1P1Q9UKY3 287 aa12□□□□□ -0.49
NELFE-209ENST00000488426 PSME2Q9UL46 239 aa12□□□□□ -0.49
NELFE-209ENST00000488426 ENTPD4Q9Y227 616 aa12□□□□□ -0.49
NELFE-209ENST00000488426 IGHV1OR21-1A0A087WYE8 117 aa11.99□□□□□ -0.49
NELFE-209ENST00000488426 MYO1GB0I1T2 1018 aa11.99□□□□□ -0.49
NELFE-209ENST00000488426 DUX1O43812 170 aa11.99□□□□□ -0.49
NELFE-209ENST00000488426 C1QCP02747 245 aa11.99□□□□□ -0.49
NELFE-209ENST00000488426 CKMT1AP12532 417 aa11.99□□□□□ -0.49
NELFE-209ENST00000488426 ALDH4A1P30038 563 aa11.99□□□□□ -0.49
NELFE-209ENST00000488426 TLX1P31314 330 aaPredicted RBP11.99□□□□□ -0.49
NELFE-209ENST00000488426 PCGF2P35227 344 aa11.99□□□□□ -0.49
NELFE-209ENST00000488426 PPM1FP49593 454 aaPredicted RBP11.99□□□□□ -0.49
NELFE-209ENST00000488426 DAB2P98082 770 aa11.99□□□□□ -0.49
NELFE-209ENST00000488426 RBBP4Q09028 425 aa11.99□□□□□ -0.49
NELFE-209ENST00000488426 CEBPEQ15744 281 aa11.99□□□□□ -0.49
NELFE-209ENST00000488426 ADRM1Q16186 407 aa11.99□□□□□ -0.49
NELFE-209ENST00000488426 CMPK2Q5EBM0 449 aa11.99□□□□□ -0.49
NELFE-209ENST00000488426 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.99□□□□□ -0.49
NELFE-209ENST00000488426 LPCAT4Q643R3 524 aa11.99□□□□□ -0.49
NELFE-209ENST00000488426 SAXO2Q658L1 398 aa11.99□□□□□ -0.49
NELFE-209ENST00000488426 C18orf63Q68DL7 685 aa11.99□□□□□ -0.49
NELFE-209ENST00000488426 ANGPTL8Q6UXH0 198 aa11.99□□□□□ -0.49
NELFE-209ENST00000488426 TMPRSS12Q86WS5 348 aa11.99□□□□□ -0.49
NELFE-209ENST00000488426 SAMD14Q8IZD0 417 aaPredicted RBP11.99□□□□□ -0.49
NELFE-209ENST00000488426 GALNT15Q8N3T1 639 aa11.99□□□□□ -0.49
NELFE-209ENST00000488426 C11orf65Q8NCR3 313 aa11.99□□□□□ -0.49
NELFE-209ENST00000488426 OR6C4Q8NGE1 309 aa11.99□□□□□ -0.49
NELFE-209ENST00000488426 DNAJC9Q8WXX5 260 aa11.99□□□□□ -0.49
NELFE-209ENST00000488426 LRTOMTQ8WZ04 291 aa11.99□□□□□ -0.49
NELFE-209ENST00000488426 KLHL6Q8WZ60 621 aa11.99□□□□□ -0.49
NELFE-209ENST00000488426 PPWD1Q96BP3 646 aaKnown RBP11.99□□□□□ -0.49
NELFE-209ENST00000488426 NEURL3Q96EH8 262 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms