RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 COQ9O75208 318 aa11.24□□□□□ -0.61
TRA2B-214ENST00000487615 MAD2L1BPQ15013 274 aaPredicted RBP11.24□□□□□ -0.61
TRA2B-214ENST00000487615 HMGN2P46Q86SG4 172 aa11.24□□□□□ -0.61
TRA2B-214ENST00000487615 NCSTNQ92542 709 aa11.24□□□□□ -0.61
TRA2B-214ENST00000487615 KCTD7Q96MP8 289 aa11.24□□□□□ -0.61
TRA2B-214ENST00000487615 MMP27Q9H306 513 aa11.24□□□□□ -0.61
TRA2B-214ENST00000487615 CXXC1Q9P0U4 656 aaPredicted RBP11.24□□□□□ -0.61
TRA2B-214ENST00000487615 MED16Q9Y2X0 877 aa11.24□□□□□ -0.61
TRA2B-214ENST00000487615 IFT52Q9Y366 437 aa11.24□□□□□ -0.61
TRA2B-214ENST00000487615 SH3PXD2BA1X283 911 aa11.24□□□□□ -0.61
TRA2B-214ENST00000487615 C2orf74A8MZ97 194 aa11.24□□□□□ -0.61
TRA2B-214ENST00000487615 AKAP8O43823 692 aaKnown RBP11.24□□□□□ -0.61
TRA2B-214ENST00000487615 PRKAR1AP10644 381 aa11.24□□□□□ -0.61
TRA2B-214ENST00000487615 ITIH1P19827 911 aa11.24□□□□□ -0.61
TRA2B-214ENST00000487615 POLR2IP36954 125 aaKnown RBP11.24□□□□□ -0.61
TRA2B-214ENST00000487615 CXCR4P61073 352 aa11.24□□□□□ -0.61
TRA2B-214ENST00000487615 IHHQ14623 411 aa11.24□□□□□ -0.61
TRA2B-214ENST00000487615 RPS26P11Q5JNZ5 115 aaPredicted RBP11.24□□□□□ -0.61
TRA2B-214ENST00000487615 SLC27A4Q6P1M0 643 aa11.24□□□□□ -0.61
TRA2B-214ENST00000487615 KLHL17Q6TDP4 642 aa11.24□□□□□ -0.61
TRA2B-214ENST00000487615 PLET1Q6UQ28 207 aa11.24□□□□□ -0.61
TRA2B-214ENST00000487615 LRRC25Q8N386 305 aaPredicted RBP11.24□□□□□ -0.61
TRA2B-214ENST00000487615 KLHL36Q8N4N3 616 aa11.24□□□□□ -0.61
TRA2B-214ENST00000487615 ZNF740Q8NDX6 193 aa11.24□□□□□ -0.61
TRA2B-214ENST00000487615 TMEM203Q969S6 136 aa11.24□□□□□ -0.61
TRA2B-214ENST00000487615 TRIM43Q96BQ3 446 aaPredicted RBP11.24□□□□□ -0.61
TRA2B-214ENST00000487615 MGLLQ99685 303 aa11.24□□□□□ -0.61
TRA2B-214ENST00000487615 ANKRA2Q9H9E1 313 aa11.24□□□□□ -0.61
TRA2B-214ENST00000487615 PPT2Q9UMR5 302 aa11.24□□□□□ -0.61
TRA2B-214ENST00000487615 ST14Q9Y5Y6 855 aa11.24□□□□□ -0.61
TRA2B-214ENST00000487615 CXorf51AA0A1B0GTR3 108 aa11.24□□□□□ -0.61
TRA2B-214ENST00000487615 DAPL1A0PJW8 107 aa11.24□□□□□ -0.61
TRA2B-214ENST00000487615 CLCA1A8K7I4 914 aa11.24□□□□□ -0.61
TRA2B-214ENST00000487615 VILLO15195 856 aa11.24□□□□□ -0.61
TRA2B-214ENST00000487615 RCBTB2O95199 551 aa11.24□□□□□ -0.61
TRA2B-214ENST00000487615 ACPPP15309 386 aa11.24□□□□□ -0.61
TRA2B-214ENST00000487615 TYRP1P17643 537 aa11.24□□□□□ -0.61
TRA2B-214ENST00000487615 ACADLP28330 430 aa11.24□□□□□ -0.61
TRA2B-214ENST00000487615 IRF4Q15306 451 aa11.24□□□□□ -0.61
TRA2B-214ENST00000487615 FGD2Q7Z6J4 655 aa11.24□□□□□ -0.61
TRA2B-214ENST00000487615 OR5K2Q8NHB8 316 aa11.24□□□□□ -0.61
TRA2B-214ENST00000487615 ZFP90Q8TF47 636 aa11.24□□□□□ -0.61
TRA2B-214ENST00000487615 TMCO6Q96DC7 493 aa11.24□□□□□ -0.61
TRA2B-214ENST00000487615 ZSWIM3Q96MP5 696 aa11.24□□□□□ -0.61
TRA2B-214ENST00000487615 APOOQ9BUR5 198 aa11.24□□□□□ -0.61
TRA2B-214ENST00000487615 CUEDC1Q9NWM3 386 aaPredicted RBP11.24□□□□□ -0.61
TRA2B-214ENST00000487615 OR6C74A6NCV1 312 aa11.23□□□□□ -0.61
TRA2B-214ENST00000487615 MRPS14O60783 128 aaKnown RBP11.23□□□□□ -0.61
TRA2B-214ENST00000487615 CD160O95971 181 aa11.23□□□□□ -0.61
TRA2B-214ENST00000487615 NPPBP16860 134 aa11.23□□□□□ -0.61
TRA2B-214ENST00000487615 PSMB5P28074 263 aa11.23□□□□□ -0.61
TRA2B-214ENST00000487615 CLK3P49761 638 aaKnown RBP11.23□□□□□ -0.61
TRA2B-214ENST00000487615 APOFQ13790 326 aa11.23□□□□□ -0.61
TRA2B-214ENST00000487615 UAP1L1Q3KQV9 507 aa11.23□□□□□ -0.61
TRA2B-214ENST00000487615 TMEM236Q5W0B7 351 aa11.23□□□□□ -0.61
TRA2B-214ENST00000487615 SLC36A4Q6YBV0 504 aa11.23□□□□□ -0.61
TRA2B-214ENST00000487615 METTL25Q8N6Q8 603 aa11.23□□□□□ -0.61
TRA2B-214ENST00000487615 AVL9Q8NBF6 648 aa11.23□□□□□ -0.61
TRA2B-214ENST00000487615 PAPD5Q8NDF8 572 aaKnown RBP11.23□□□□□ -0.61
TRA2B-214ENST00000487615 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.23□□□□□ -0.612e-7■■□□□ 14.5
TRA2B-214ENST00000487615 FNDC8Q8TC99 324 aa11.23□□□□□ -0.61
TRA2B-214ENST00000487615 GNPDA2Q8TDQ7 276 aa11.23□□□□□ -0.61
TRA2B-214ENST00000487615 TRUB1Q8WWH5 349 aaKnown RBP11.23□□□□□ -0.61
TRA2B-214ENST00000487615 OSTF1Q92882 214 aa11.23□□□□□ -0.61
TRA2B-214ENST00000487615 CD180Q99467 661 aa11.23□□□□□ -0.61
TRA2B-214ENST00000487615 BCL7BQ9BQE9 202 aa11.23□□□□□ -0.61
TRA2B-214ENST00000487615 SPRTNQ9H040 489 aaPredicted RBP11.23□□□□□ -0.61
TRA2B-214ENST00000487615 PRSS16Q9NQE7 514 aa11.23□□□□□ -0.61
TRA2B-214ENST00000487615 GPR83Q9NYM4 423 aa11.23□□□□□ -0.61
TRA2B-214ENST00000487615 NLGN3Q9NZ94 848 aa11.23□□□□□ -0.61
TRA2B-214ENST00000487615 TNFRSF10DQ9UBN6 386 aa11.23□□□□□ -0.61
TRA2B-214ENST00000487615 A0A0G2JMZ2 1700 aa11.23□□□□□ -0.61
TRA2B-214ENST00000487615 CNR2P34972 360 aa11.23□□□□□ -0.61
TRA2B-214ENST00000487615 IL18Q14116 193 aa11.23□□□□□ -0.61
TRA2B-214ENST00000487615 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.23□□□□□ -0.61
TRA2B-214ENST00000487615 ALDH16A1Q8IZ83 802 aa11.23□□□□□ -0.61
TRA2B-214ENST00000487615 FBXO15Q8NCQ5 510 aaPredicted RBP11.23□□□□□ -0.61
TRA2B-214ENST00000487615 OR52E4Q8NGH9 312 aa11.23□□□□□ -0.61
TRA2B-214ENST00000487615 SNX33Q8WV41 574 aa11.23□□□□□ -0.61
TRA2B-214ENST00000487615 TSACCQ96A04 125 aaPredicted RBP11.23□□□□□ -0.61
TRA2B-214ENST00000487615 EID2BQ96D98 161 aa11.23□□□□□ -0.61
TRA2B-214ENST00000487615 NKX2-4Q9H2Z4 354 aa11.23□□□□□ -0.61
TRA2B-214ENST00000487615 NMNAT1Q9HAN9 279 aaPredicted RBP11.23□□□□□ -0.61
TRA2B-214ENST00000487615 SLC25A37Q9NYZ2 338 aa11.23□□□□□ -0.61
TRA2B-214ENST00000487615 SCML1Q9UN30 329 aa11.23□□□□□ -0.61
TRA2B-214ENST00000487615 PCDHGB5Q9Y5G0 923 aa11.23□□□□□ -0.61
TRA2B-214ENST00000487615 LCTP09848 1927 aa11.23□□□□□ -0.61
TRA2B-214ENST00000487615 NUP214P35658 2090 aaPredicted RBP11.23□□□□□ -0.61
TRA2B-214ENST00000487615 WDR90Q96KV7 1748 aa11.23□□□□□ -0.61
TRA2B-214ENST00000487615 SCN2BO60939 215 aa11.23□□□□□ -0.61
TRA2B-214ENST00000487615 BCAS1O75363 584 aaPredicted RBP11.23□□□□□ -0.61
TRA2B-214ENST00000487615 PRDX1Q06830 199 aaKnown RBP11.23□□□□□ -0.61
TRA2B-214ENST00000487615 PCDH1Q08174 1060 aa11.23□□□□□ -0.61
TRA2B-214ENST00000487615 TUBA3EQ6PEY2 450 aa11.23□□□□□ -0.61
TRA2B-214ENST00000487615 CENPSQ8N2Z9 138 aa11.23□□□□□ -0.61
TRA2B-214ENST00000487615 OR4K5Q8NGD3 323 aa11.23□□□□□ -0.61
TRA2B-214ENST00000487615 HMGCLL1Q8TB92 370 aa11.23□□□□□ -0.61
TRA2B-214ENST00000487615 GRHL3Q8TE85 626 aa11.23□□□□□ -0.61
TRA2B-214ENST00000487615 TIMM29Q9BSF4 260 aa11.23□□□□□ -0.61
TRA2B-214ENST00000487615 MKKSQ9NPJ1 570 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms