RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 SERPINB9P50453 376 aa21.83■■□□□ 1.09
PLOD3-215ENST00000487563 NEK2P51955 445 aa21.83■■□□□ 1.09
PLOD3-215ENST00000487563 CCNG1P51959 295 aa21.83■■□□□ 1.09
PLOD3-215ENST00000487563 MPEG1Q2M385 716 aa21.83■■□□□ 1.09
PLOD3-215ENST00000487563 NDUFAF5Q5TEU4 345 aa21.83■■□□□ 1.09
PLOD3-215ENST00000487563 RELL1Q8IUW5 271 aa21.83■■□□□ 1.09
PLOD3-215ENST00000487563 ST13P4Q8IZP2 240 aaPredicted RBP21.83■■□□□ 1.09
PLOD3-215ENST00000487563 L3MBTL4Q8NA19 623 aa21.83■■□□□ 1.09
PLOD3-215ENST00000487563 MNS1Q8NEH6 495 aa21.83■■□□□ 1.09
PLOD3-215ENST00000487563 NUBPLQ8TB37 319 aa21.83■■□□□ 1.09
PLOD3-215ENST00000487563 PHF21BQ96EK2 531 aa21.83■■□□□ 1.09
PLOD3-215ENST00000487563 GAL3ST4Q96RP7 486 aa21.83■■□□□ 1.09
PLOD3-215ENST00000487563 PAFAH2Q99487 392 aa21.83■■□□□ 1.09
PLOD3-215ENST00000487563 TP63Q9H3D4 680 aaPredicted RBP21.83■■□□□ 1.09
PLOD3-215ENST00000487563 PLSCR2Q9NRY7 297 aa21.83■■□□□ 1.09
PLOD3-215ENST00000487563 ZNF358Q9NW07 568 aa21.83■■□□□ 1.09
PLOD3-215ENST00000487563 ABCA12Q86UK0 2595 aa21.82■■□□□ 1.08
PLOD3-215ENST00000487563 A0A0A6YYD5 115 aa21.82■■□□□ 1.08
PLOD3-215ENST00000487563 IQANK1A0A1B0GTG1 560 aa21.82■■□□□ 1.08
PLOD3-215ENST00000487563 GLOD5A6NK44 160 aa21.82■■□□□ 1.08
PLOD3-215ENST00000487563 PROM1O43490 865 aa21.82■■□□□ 1.08
PLOD3-215ENST00000487563 KRT38O76015 456 aa21.82■■□□□ 1.08
PLOD3-215ENST00000487563 FAM58BPP0C7Q3 252 aa21.82■■□□□ 1.08
PLOD3-215ENST00000487563 BSGP35613 385 aa21.82■■□□□ 1.08
PLOD3-215ENST00000487563 HERVK_113P63132 956 aa21.82■■□□□ 1.08
PLOD3-215ENST00000487563 ERVK-8P63133 956 aa21.82■■□□□ 1.08
PLOD3-215ENST00000487563 TSNAXIP1Q2TAA8 658 aa21.82■■□□□ 1.08
PLOD3-215ENST00000487563 TTC19Q6DKK2 380 aaPredicted RBP21.82■■□□□ 1.08
PLOD3-215ENST00000487563 TMEM211Q6ICI0 200 aa21.82■■□□□ 1.08
PLOD3-215ENST00000487563 DGAT2L6Q6ZPD8 337 aa21.82■■□□□ 1.08
PLOD3-215ENST00000487563 SLC29A4Q7RTT9 530 aa21.82■■□□□ 1.08
PLOD3-215ENST00000487563 C9orf40Q8IXQ3 194 aa21.82■■□□□ 1.08
PLOD3-215ENST00000487563 MMGT1Q8N4V1 131 aa21.82■■□□□ 1.08
PLOD3-215ENST00000487563 WDR20Q8TBZ3 569 aa21.82■■□□□ 1.08
PLOD3-215ENST00000487563 CDK15Q96Q40 435 aa21.82■■□□□ 1.08
PLOD3-215ENST00000487563 SERPINI1Q99574 410 aa21.82■■□□□ 1.08
PLOD3-215ENST00000487563 ERVK-6Q9BXR3 956 aa21.82■■□□□ 1.08
PLOD3-215ENST00000487563 ZNF717Q9BY31 904 aaPredicted RBP21.82■■□□□ 1.08
PLOD3-215ENST00000487563 DDX31Q9H8H2 851 aaKnown RBP21.82■■□□□ 1.08
PLOD3-215ENST00000487563 XPR1Q9UBH6 696 aa21.82■■□□□ 1.08
PLOD3-215ENST00000487563 ERVK-19Q9WJR5 959 aa21.82■■□□□ 1.08
PLOD3-215ENST00000487563 LRBAP50851 2863 aa21.81■■□□□ 1.08
PLOD3-215ENST00000487563 POC1B-GALNT4F8VUJ3 575 aa21.81■■□□□ 1.08
PLOD3-215ENST00000487563 C19orf84I3L1E1 186 aa21.81■■□□□ 1.08
PLOD3-215ENST00000487563 FOXE1O00358 373 aaPredicted RBP21.81■■□□□ 1.08
PLOD3-215ENST00000487563 TMPRSS11DO60235 418 aa21.81■■□□□ 1.08
PLOD3-215ENST00000487563 ZNF354AO60765 605 aaPredicted RBP21.81■■□□□ 1.08
PLOD3-215ENST00000487563 GPR75O95800 540 aa21.81■■□□□ 1.08
PLOD3-215ENST00000487563 IGKV3-11P04433 115 aa21.81■■□□□ 1.08
PLOD3-215ENST00000487563 CCL3P10147 92 aa21.81■■□□□ 1.08
PLOD3-215ENST00000487563 DNASE1L1P49184 302 aa21.81■■□□□ 1.08
PLOD3-215ENST00000487563 ZNF267Q14586 743 aaPredicted RBP21.81■■□□□ 1.08
PLOD3-215ENST00000487563 PIGGQ5H8A4 983 aa21.81■■□□□ 1.08
PLOD3-215ENST00000487563 MRM1Q6IN84 353 aaKnown RBP21.81■■□□□ 1.08
PLOD3-215ENST00000487563 RNF111Q6ZNA4 994 aa21.81■■□□□ 1.08
PLOD3-215ENST00000487563 NOA1Q8NC60 698 aaKnown RBP21.81■■□□□ 1.08
PLOD3-215ENST00000487563 OR52B6Q8NGF0 335 aa21.81■■□□□ 1.08
PLOD3-215ENST00000487563 DOK4Q8TEW6 326 aa21.81■■□□□ 1.08
PLOD3-215ENST00000487563 FUT8Q9BYC5 575 aa21.81■■□□□ 1.08
PLOD3-215ENST00000487563 ZDHHC11Q9H8X9 412 aa21.81■■□□□ 1.08
PLOD3-215ENST00000487563 IL1RL2Q9HB29 575 aa21.81■■□□□ 1.08
PLOD3-215ENST00000487563 DMGDHQ9UI17 866 aaKnown RBP21.81■■□□□ 1.08
PLOD3-215ENST00000487563 ASB4Q9Y574 426 aa21.81■■□□□ 1.08
PLOD3-215ENST00000487563 CACNA1CQ13936 2221 aa21.8■■□□□ 1.08
PLOD3-215ENST00000487563 PKDREJQ9NTG1 2253 aa21.8■■□□□ 1.08
PLOD3-215ENST00000487563 A0A1W2PR48 441 aa21.8■■□□□ 1.08
PLOD3-215ENST00000487563 NPIPA2E9PIF3 369 aa21.8■■□□□ 1.08
PLOD3-215ENST00000487563 NPIPA3F8WFD2 350 aa21.8■■□□□ 1.08
PLOD3-215ENST00000487563 STX16-NPEPL1H3BU86 382 aa21.8■■□□□ 1.08
PLOD3-215ENST00000487563 HRKO00198 91 aa21.8■■□□□ 1.08
PLOD3-215ENST00000487563 OR7A17O14581 309 aa21.8■■□□□ 1.08
PLOD3-215ENST00000487563 STX16O14662 325 aa21.8■■□□□ 1.08
PLOD3-215ENST00000487563 AIFM1O95831 613 aa21.8■■□□□ 1.08
PLOD3-215ENST00000487563 GBAP04062 536 aa21.8■■□□□ 1.08
PLOD3-215ENST00000487563 MAGEA12P43365 314 aa21.8■■□□□ 1.08
PLOD3-215ENST00000487563 OR52E8Q6IFG1 317 aa21.8■■□□□ 1.08
PLOD3-215ENST00000487563 FAM109AQ8N4B1 249 aa21.8■■□□□ 1.08
PLOD3-215ENST00000487563 TMEM251Q8N6I4 163 aa21.8■■□□□ 1.08
PLOD3-215ENST00000487563 RIT1Q92963 219 aa21.8■■□□□ 1.08
PLOD3-215ENST00000487563 ISL2Q96A47 359 aa21.8■■□□□ 1.08
PLOD3-215ENST00000487563 PSD3Q9NYI0 1048 aa21.8■■□□□ 1.08
PLOD3-215ENST00000487563 PCTPQ9UKL6 214 aa21.8■■□□□ 1.08
PLOD3-215ENST00000487563 GLSO94925 669 aaPredicted RBP21.79■■□□□ 1.08
PLOD3-215ENST00000487563 SEMA3DO95025 777 aa21.79■■□□□ 1.08
PLOD3-215ENST00000487563 CTAGE8P0CG41 777 aa21.79■■□□□ 1.08
PLOD3-215ENST00000487563 CNTFP26441 200 aa21.79■■□□□ 1.08
PLOD3-215ENST00000487563 MAGEA5P43359 124 aa21.79■■□□□ 1.08
PLOD3-215ENST00000487563 IFT88Q13099 833 aa21.79■■□□□ 1.08
PLOD3-215ENST00000487563 SPRED3Q2MJR0 410 aa21.79■■□□□ 1.08
PLOD3-215ENST00000487563 FRG2Q64ET8 278 aa21.79■■□□□ 1.08
PLOD3-215ENST00000487563 CTAGE4Q8IX94 777 aa21.79■■□□□ 1.08
PLOD3-215ENST00000487563 SLC15A4Q8N697 577 aa21.79■■□□□ 1.08
PLOD3-215ENST00000487563 FAM13CQ8NE31 585 aa21.79■■□□□ 1.08
PLOD3-215ENST00000487563 UHMK1Q8TAS1 419 aaKnown RBP21.79■■□□□ 1.08
PLOD3-215ENST00000487563 ASB5Q8WWX0 329 aa21.79■■□□□ 1.08
PLOD3-215ENST00000487563 SPACA9Q96E40 222 aaPredicted RBP21.79■■□□□ 1.08
PLOD3-215ENST00000487563 FRG2BQ96QU4 278 aa21.79■■□□□ 1.08
PLOD3-215ENST00000487563 SMC6Q96SB8 1091 aa21.79■■□□□ 1.08
PLOD3-215ENST00000487563 TUBA8Q9NY65 449 aaPredicted RBP21.79■■□□□ 1.08
PLOD3-215ENST00000487563 TRIM49D1C9J1S8 452 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms