RNA–Protein interactions for RNA: ENST00000487539.1

CNN3-206, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-206ENST00000487539 OR10Q1Q8NGQ4 319 aa4.03□□□□□ -1.76
CNN3-206ENST00000487539 SLC25A28Q96A46 364 aa4.03□□□□□ -1.76
CNN3-206ENST00000487539 DHX58Q96C10 678 aa4.03□□□□□ -1.76
CNN3-206ENST00000487539 CXorf40BQ96DE9 158 aa4.03□□□□□ -1.76
CNN3-206ENST00000487539 PGAP3Q96FM1 320 aaPredicted RBP4.03□□□□□ -1.76
CNN3-206ENST00000487539 NPAS1Q99742 590 aa4.03□□□□□ -1.76
CNN3-206ENST00000487539 NPAS2Q99743 824 aa4.03□□□□□ -1.76
CNN3-206ENST00000487539 SORBS1Q9BX66 1292 aaKnown RBP4.03□□□□□ -1.76
CNN3-206ENST00000487539 ATP13A3Q9H7F0 1226 aa4.03□□□□□ -1.76
CNN3-206ENST00000487539 TRMT1Q9NXH9 659 aaKnown RBP4.03□□□□□ -1.76
CNN3-206ENST00000487539 NDUFAF4Q9P032 175 aa4.03□□□□□ -1.76
CNN3-206ENST00000487539 CTSFQ9UBX1 484 aa4.03□□□□□ -1.76
CNN3-206ENST00000487539 OR12D3Q9UGF7 316 aa4.03□□□□□ -1.76
CNN3-206ENST00000487539 BAG5Q9UL15 447 aa4.03□□□□□ -1.76
CNN3-206ENST00000487539 DAPP1Q9UN19 280 aa4.03□□□□□ -1.76
CNN3-206ENST00000487539 MRPS2Q9Y399 296 aaKnown RBP4.03□□□□□ -1.76
CNN3-206ENST00000487539 SCN2AQ99250 2005 aa4.03□□□□□ -1.76
CNN3-206ENST00000487539 SNRNP200O75643 2136 aaKnown RBP4.03□□□□□ -1.76
CNN3-206ENST00000487539 RYR2Q92736 4967 aa4.02□□□□□ -1.77
CNN3-206ENST00000487539 TTI1O43156 1089 aa4.02□□□□□ -1.77
CNN3-206ENST00000487539 CD5LO43866 347 aa4.02□□□□□ -1.77
CNN3-206ENST00000487539 GPRIN2O60269 458 aa4.02□□□□□ -1.77
CNN3-206ENST00000487539 SOX30O94993 753 aa4.02□□□□□ -1.77
CNN3-206ENST00000487539 LETM1O95202 739 aaPredicted RBP4.02□□□□□ -1.77
CNN3-206ENST00000487539 TOMM40O96008 361 aa4.02□□□□□ -1.77
CNN3-206ENST00000487539 HPP00738 406 aa4.02□□□□□ -1.77
CNN3-206ENST00000487539 CSTBP04080 98 aaKnown RBP4.02□□□□□ -1.77
CNN3-206ENST00000487539 COX6A1P12074 109 aa4.02□□□□□ -1.77
CNN3-206ENST00000487539 KRT13P13646 458 aa4.02□□□□□ -1.77
CNN3-206ENST00000487539 CDH3P22223 829 aa4.02□□□□□ -1.77
CNN3-206ENST00000487539 NR2F2P24468 414 aa4.02□□□□□ -1.77
CNN3-206ENST00000487539 CSNK1DP48730 415 aa4.02□□□□□ -1.77
CNN3-206ENST00000487539 EFNA3P52797 238 aa4.02□□□□□ -1.77
CNN3-206ENST00000487539 EEF1A2Q05639 463 aaKnown RBP4.02□□□□□ -1.77
CNN3-206ENST00000487539 GALNT1Q10472 559 aaPredicted RBP4.02□□□□□ -1.77
CNN3-206ENST00000487539 FOXO1Q12778 655 aa4.02□□□□□ -1.77
CNN3-206ENST00000487539 FASTKQ14296 549 aaKnown RBP4.02□□□□□ -1.77
CNN3-206ENST00000487539 PRTGQ2VWP7 1150 aa4.02□□□□□ -1.77
CNN3-206ENST00000487539 CCDC14Q49A88 953 aa4.02□□□□□ -1.77
CNN3-206ENST00000487539 PTPN20Q4JDL3 420 aa4.02□□□□□ -1.77
CNN3-206ENST00000487539 ARMC12Q5T9G4 340 aa4.02□□□□□ -1.77
CNN3-206ENST00000487539 LRRC66Q68CR7 880 aa4.02□□□□□ -1.77
CNN3-206ENST00000487539 TXNRD3NBQ6F5E7 133 aa4.02□□□□□ -1.77
CNN3-206ENST00000487539 TMEM211Q6ICI0 200 aa4.02□□□□□ -1.77
CNN3-206ENST00000487539 RHBDD2Q6NTF9 364 aa4.02□□□□□ -1.77
CNN3-206ENST00000487539 C12orf54Q6X4T0 127 aa4.02□□□□□ -1.77
CNN3-206ENST00000487539 C11orf57Q6ZUT1 292 aaPredicted RBP4.02□□□□□ -1.77
CNN3-206ENST00000487539 IL17RELQ6ZVW7 336 aa4.02□□□□□ -1.77
CNN3-206ENST00000487539 INTS8Q75QN2 995 aaKnown RBP4.02□□□□□ -1.77
CNN3-206ENST00000487539 SLC26A9Q7LBE3 791 aa4.02□□□□□ -1.77
CNN3-206ENST00000487539 GALNTL5Q7Z4T8 443 aa4.02□□□□□ -1.77
CNN3-206ENST00000487539 KLBQ86Z14 1044 aa4.02□□□□□ -1.77
CNN3-206ENST00000487539 BEST3Q8N1M1 668 aa4.02□□□□□ -1.77
CNN3-206ENST00000487539 PGBD5Q8N414 524 aa4.02□□□□□ -1.77
CNN3-206ENST00000487539 CCDC185Q8N715 623 aa4.02□□□□□ -1.77
CNN3-206ENST00000487539 PAF1Q8N7H5 531 aa4.02□□□□□ -1.77
CNN3-206ENST00000487539 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.02□□□□□ -1.77
CNN3-206ENST00000487539 RELL2Q8NC24 303 aaPredicted RBP4.02□□□□□ -1.77
CNN3-206ENST00000487539 OR4E2Q8NGC2 313 aa4.02□□□□□ -1.77
CNN3-206ENST00000487539 OR5M9Q8NGP3 310 aa4.02□□□□□ -1.77
CNN3-206ENST00000487539 EXD1Q8NHP7 514 aa4.02□□□□□ -1.77
CNN3-206ENST00000487539 GOLGA5Q8TBA6 731 aa4.02□□□□□ -1.77
CNN3-206ENST00000487539 CCDC110Q8TBZ0 833 aa4.02□□□□□ -1.77
CNN3-206ENST00000487539 FAM222BQ8WU58 562 aa4.02□□□□□ -1.77
CNN3-206ENST00000487539 SLC20A1Q8WUM9 679 aa4.02□□□□□ -1.77
CNN3-206ENST00000487539 NAT14Q8WUY8 206 aa4.02□□□□□ -1.77
CNN3-206ENST00000487539 ZNF606Q8WXB4 792 aa4.02□□□□□ -1.77
CNN3-206ENST00000487539 CELF6Q96J87 481 aaKnown RBP4.02□□□□□ -1.77
CNN3-206ENST00000487539 ADAD1Q96M93 576 aaKnown RBP4.02□□□□□ -1.77
CNN3-206ENST00000487539 CFAP57Q96MR6 1250 aa4.02□□□□□ -1.77
CNN3-206ENST00000487539 SECISBP2Q96T21 854 aaKnown RBP4.02□□□□□ -1.77
CNN3-206ENST00000487539 PIGQQ9BRB3 760 aa4.02□□□□□ -1.77
CNN3-206ENST00000487539 TRIM62Q9BVG3 475 aa4.02□□□□□ -1.77
CNN3-206ENST00000487539 SEPT11Q9NVA2 429 aaKnown RBP4.02□□□□□ -1.77
CNN3-206ENST00000487539 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.02□□□□□ -1.77
CNN3-206ENST00000487539 VPS18Q9P253 973 aa4.02□□□□□ -1.77
CNN3-206ENST00000487539 UBA2Q9UBT2 640 aaPredicted RBP4.02□□□□□ -1.77
CNN3-206ENST00000487539 GNPTGQ9UJJ9 305 aa4.02□□□□□ -1.77
CNN3-206ENST00000487539 COQ4Q9Y3A0 265 aa4.02□□□□□ -1.77
CNN3-206ENST00000487539 FAM215AQ9Y5M1 114 aa4.02□□□□□ -1.77
CNN3-206ENST00000487539 ALPK2Q86TB3 2170 aa4.02□□□□□ -1.77
CNN3-206ENST00000487539 YLPM1P49750 1951 aaKnown RBP4.02□□□□□ -1.77
CNN3-206ENST00000487539 VWFP04275 2813 aa4.01□□□□□ -1.77
CNN3-206ENST00000487539 TMEM272A0A1B0GTI8 110 aa4.01□□□□□ -1.77
CNN3-206ENST00000487539 A8MUI8 341 aa4.01□□□□□ -1.77
CNN3-206ENST00000487539 A8MV72 311 aaPredicted RBP4.01□□□□□ -1.77
CNN3-206ENST00000487539 KDM4EB2RXH2 506 aaPredicted RBP4.01□□□□□ -1.77
CNN3-206ENST00000487539 IDSB3KWA1 339 aa4.01□□□□□ -1.77
CNN3-206ENST00000487539 BTN3A3O00478 584 aa4.01□□□□□ -1.77
CNN3-206ENST00000487539 CHUKO15111 745 aa4.01□□□□□ -1.77
CNN3-206ENST00000487539 EPB41L2O43491 1005 aaKnown RBP4.01□□□□□ -1.77
CNN3-206ENST00000487539 CDC40O60508 579 aaKnown RBP eCLIP4.01□□□□□ -1.77
CNN3-206ENST00000487539 PRAMEF11O60813 436 aa4.01□□□□□ -1.77
CNN3-206ENST00000487539 OR2B3O76000 313 aa4.01□□□□□ -1.77
CNN3-206ENST00000487539 BMP10O95393 424 aa4.01□□□□□ -1.77
CNN3-206ENST00000487539 CLDN7O95471 211 aa4.01□□□□□ -1.77
CNN3-206ENST00000487539 SERPINA7P05543 415 aa4.01□□□□□ -1.77
CNN3-206ENST00000487539 TNFRSF1BP20333 461 aa4.01□□□□□ -1.77
CNN3-206ENST00000487539 IDSP22304 550 aa4.01□□□□□ -1.77
CNN3-206ENST00000487539 MCM3P25205 808 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms