RNA–Protein interactions for RNA: ENST00000487481.1

NME1-208, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 2

Gene NME1, Length 987 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-208ENST00000487481 LDB3O75112 727 aa13.9□□□□□ -0.18
NME1-208ENST00000487481 LRATO95237 230 aa13.9□□□□□ -0.18
NME1-208ENST00000487481 IGKV3-11P04433 115 aa13.9□□□□□ -0.18
NME1-208ENST00000487481 MC3RP41968 323 aa13.9□□□□□ -0.18
NME1-208ENST00000487481 MSH2P43246 934 aa13.9□□□□□ -0.18
NME1-208ENST00000487481 DIO3P55073 304 aa13.9□□□□□ -0.18
NME1-208ENST00000487481 IL2P60568 153 aa13.9□□□□□ -0.18
NME1-208ENST00000487481 NTRK2Q16620 822 aa13.9□□□□□ -0.18
NME1-208ENST00000487481 ADPRMQ3LIE5 342 aa13.9□□□□□ -0.18
NME1-208ENST00000487481 DCST1Q5T197 706 aa13.9□□□□□ -0.18
NME1-208ENST00000487481 TMIGD1Q6UXZ0 262 aa13.9□□□□□ -0.18
NME1-208ENST00000487481 KIAA1328Q86T90 577 aa13.9□□□□□ -0.18
NME1-208ENST00000487481 CAND1Q86VP6 1230 aaKnown RBP13.9□□□□□ -0.18
NME1-208ENST00000487481 ZNF441Q8N8Z8 693 aa13.9□□□□□ -0.18
NME1-208ENST00000487481 PIK3IP1Q96FE7 263 aa13.9□□□□□ -0.18
NME1-208ENST00000487481 SENP5Q96HI0 755 aaPredicted RBP13.9□□□□□ -0.18
NME1-208ENST00000487481 ART5Q96L15 291 aa13.9□□□□□ -0.18
NME1-208ENST00000487481 TM9SF2Q99805 663 aa13.9□□□□□ -0.18
NME1-208ENST00000487481 ACBD3Q9H3P7 528 aa13.9□□□□□ -0.18
NME1-208ENST00000487481 LYRM4Q9HD34 91 aa13.9□□□□□ -0.18
NME1-208ENST00000487481 SLC22A14Q9Y267 594 aa13.9□□□□□ -0.18
NME1-208ENST00000487481 SDR42E2A6NKP2 422 aa13.89□□□□□ -0.19
NME1-208ENST00000487481 A8MXE2 369 aa13.89□□□□□ -0.19
NME1-208ENST00000487481 DYRK3O43781 588 aa13.89□□□□□ -0.19
NME1-208ENST00000487481 CLEC3AO75596 197 aa13.89□□□□□ -0.19
NME1-208ENST00000487481 RCBTB2O95199 551 aa13.89□□□□□ -0.19
NME1-208ENST00000487481 ACSL3O95573 720 aa13.89□□□□□ -0.19
NME1-208ENST00000487481 CYP4B1P13584 511 aa13.89□□□□□ -0.19
NME1-208ENST00000487481 PAX1P15863 534 aa13.89□□□□□ -0.19
NME1-208ENST00000487481 CRYGSP22914 178 aa13.89□□□□□ -0.19
NME1-208ENST00000487481 CPOXP36551 454 aa13.89□□□□□ -0.19
NME1-208ENST00000487481 MAGEA6P43360 314 aa13.89□□□□□ -0.19
NME1-208ENST00000487481 PCYT1AP49585 367 aa13.89□□□□□ -0.19
NME1-208ENST00000487481 CDKN2DP55273 166 aa13.89□□□□□ -0.19
NME1-208ENST00000487481 EEF1A1P68104 462 aaKnown RBP13.89□□□□□ -0.19
NME1-208ENST00000487481 EEF1A1P5Q5VTE0 462 aa13.89□□□□□ -0.19
NME1-208ENST00000487481 ABHD17CQ6PCB6 329 aa13.89□□□□□ -0.19
NME1-208ENST00000487481 MEIOBQ8N635 442 aa13.89□□□□□ -0.19
NME1-208ENST00000487481 DIO2Q92813 273 aa13.89□□□□□ -0.19
NME1-208ENST00000487481 ABTB1Q969K4 478 aaPredicted RBP13.89□□□□□ -0.19
NME1-208ENST00000487481 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.89□□□□□ -0.19
NME1-208ENST00000487481 PACSIN3Q9UKS6 424 aa13.89□□□□□ -0.19
NME1-208ENST00000487481 C15orf41Q9Y2V0 281 aa13.89□□□□□ -0.19
NME1-208ENST00000487481 H2AFYO75367 372 aaKnown RBP13.88□□□□□ -0.19
NME1-208ENST00000487481 SNX4O95219 450 aa13.88□□□□□ -0.19
NME1-208ENST00000487481 C1GALT1C1LP0DN25 315 aa13.88□□□□□ -0.19
NME1-208ENST00000487481 MLNP12872 115 aa13.88□□□□□ -0.19
NME1-208ENST00000487481 NID1P14543 1247 aa13.88□□□□□ -0.19
NME1-208ENST00000487481 GNAZP19086 355 aa13.88□□□□□ -0.19
NME1-208ENST00000487481 SLCO1A2P46721 670 aa13.88□□□□□ -0.19
NME1-208ENST00000487481 STT3AP46977 705 aa13.88□□□□□ -0.19
NME1-208ENST00000487481 MASP1P48740 699 aa13.88□□□□□ -0.19
NME1-208ENST00000487481 ID2Q02363 134 aa13.88□□□□□ -0.19
NME1-208ENST00000487481 TGM3Q08188 693 aa13.88□□□□□ -0.19
NME1-208ENST00000487481 SLBPQ14493 270 aaKnown RBP eCLIP13.88□□□□□ -0.19
NME1-208ENST00000487481 HSP90AA5PQ58FG0 334 aa13.88□□□□□ -0.19
NME1-208ENST00000487481 RBM20Q5T481 1227 aaKnown RBP13.88□□□□□ -0.19
NME1-208ENST00000487481 SBSNQ6UWP8 590 aa13.88□□□□□ -0.19
NME1-208ENST00000487481 SLC29A4Q7RTT9 530 aa13.88□□□□□ -0.19
NME1-208ENST00000487481 C2CD4AQ8NCU7 369 aaPredicted RBP13.88□□□□□ -0.19
NME1-208ENST00000487481 ANKRD9Q96BM1 317 aaPredicted RBP13.88□□□□□ -0.19
NME1-208ENST00000487481 FBXL20Q96IG2 436 aa13.88□□□□□ -0.19
NME1-208ENST00000487481 DGAT2Q96PD7 388 aa13.88□□□□□ -0.19
NME1-208ENST00000487481 GAL3ST4Q96RP7 486 aa13.88□□□□□ -0.19
NME1-208ENST00000487481 PITHD1Q9GZP4 211 aaPredicted RBP13.88□□□□□ -0.19
NME1-208ENST00000487481 RBSNQ9H1K0 784 aa13.88□□□□□ -0.19
NME1-208ENST00000487481 SPACA6W5XKT8 324 aa13.88□□□□□ -0.19
NME1-208ENST00000487481 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.87□□□□□ -0.19
NME1-208ENST00000487481 ANKDD1BA6NHY2 528 aa13.87□□□□□ -0.19
NME1-208ENST00000487481 TP53I11O14683 189 aa13.87□□□□□ -0.19
NME1-208ENST00000487481 TBX6O95947 436 aaPredicted RBP13.87□□□□□ -0.19
NME1-208ENST00000487481 ACTL6AO96019 429 aa13.87□□□□□ -0.19
NME1-208ENST00000487481 SOX18P35713 384 aa13.87□□□□□ -0.19
NME1-208ENST00000487481 TERF1P54274 439 aa13.87□□□□□ -0.19
NME1-208ENST00000487481 IGLV3-21P80748 117 aaPredicted RBP13.87□□□□□ -0.19
NME1-208ENST00000487481 KIF5AQ12840 1032 aa13.87□□□□□ -0.19
NME1-208ENST00000487481 PDAP1Q13442 181 aaKnown RBP13.87□□□□□ -0.19
NME1-208ENST00000487481 GAB1Q13480 694 aa13.87□□□□□ -0.19
NME1-208ENST00000487481 CAPRIN1Q14444 709 aaKnown RBP13.87□□□□□ -0.19
NME1-208ENST00000487481 RPS6KA2Q15349 733 aa13.87□□□□□ -0.19
NME1-208ENST00000487481 TOMM20Q15388 145 aa13.87□□□□□ -0.19
NME1-208ENST00000487481 EIPR1Q53HC9 387 aa13.87□□□□□ -0.19
NME1-208ENST00000487481 FNDC7Q5VTL7 733 aa13.87□□□□□ -0.19
NME1-208ENST00000487481 SCIMPQ6UWF3 145 aa13.87□□□□□ -0.19
NME1-208ENST00000487481 RAD9BQ6WBX8 426 aa13.87□□□□□ -0.19
NME1-208ENST00000487481 SLCO4C1Q6ZQN7 724 aa13.87□□□□□ -0.19
NME1-208ENST00000487481 PLEKHM3Q6ZWE6 761 aa13.87□□□□□ -0.19
NME1-208ENST00000487481 PACS2Q86VP3 889 aa13.87□□□□□ -0.19
NME1-208ENST00000487481 HIPK1Q86Z02 1210 aa13.87□□□□□ -0.19
NME1-208ENST00000487481 KRT78Q8N1N4 520 aa13.87□□□□□ -0.19
NME1-208ENST00000487481 SLC44A1Q8WWI5 657 aa13.87□□□□□ -0.19
NME1-208ENST00000487481 IGFBPL1Q8WX77 278 aa13.87□□□□□ -0.19
NME1-208ENST00000487481 WNT2BQ93097 391 aa13.87□□□□□ -0.19
NME1-208ENST00000487481 INTS12Q96CB8 462 aaKnown RBP13.87□□□□□ -0.19
NME1-208ENST00000487481 RILPQ96NA2 401 aa13.87□□□□□ -0.19
NME1-208ENST00000487481 WFIKKN1Q96NZ8 548 aa13.87□□□□□ -0.19
NME1-208ENST00000487481 GNRHR2Q96P88 292 aa13.87□□□□□ -0.19
NME1-208ENST00000487481 UCN2Q96RP3 112 aa13.87□□□□□ -0.19
NME1-208ENST00000487481 TUBA1CQ9BQE3 449 aa13.87□□□□□ -0.19
NME1-208ENST00000487481 MED18Q9BUE0 208 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms