RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 PCYT1AP49585 367 aa6.99□□□□□ -1.29
PDPN-205ENST00000487038 CDK9P50750 372 aaKnown RBP6.99□□□□□ -1.29
PDPN-205ENST00000487038 LIM2P55344 173 aa6.99□□□□□ -1.29
PDPN-205ENST00000487038 ATP5J2P56134 94 aa6.99□□□□□ -1.29
PDPN-205ENST00000487038 PLIN5Q00G26 463 aa6.99□□□□□ -1.29
PDPN-205ENST00000487038 KRTAP1-1Q07627 177 aa6.99□□□□□ -1.29
PDPN-205ENST00000487038 BIKQ13323 160 aa6.99□□□□□ -1.29
PDPN-205ENST00000487038 RUNX2Q13950 521 aa6.99□□□□□ -1.29
PDPN-205ENST00000487038 RPS6KA2Q15349 733 aa6.99□□□□□ -1.29
PDPN-205ENST00000487038 NTRK2Q16620 822 aa6.99□□□□□ -1.29
PDPN-205ENST00000487038 ZNF549Q6P9A3 640 aa6.99□□□□□ -1.29
PDPN-205ENST00000487038 NXPE4Q6UWF7 544 aa6.99□□□□□ -1.29
PDPN-205ENST00000487038 ENPP6Q6UWR7 440 aa6.99□□□□□ -1.29
PDPN-205ENST00000487038 GSTA5Q7RTV2 222 aa6.99□□□□□ -1.29
PDPN-205ENST00000487038 PRUNE1Q86TP1 453 aa6.99□□□□□ -1.29
PDPN-205ENST00000487038 C9orf40Q8IXQ3 194 aa6.99□□□□□ -1.29
PDPN-205ENST00000487038 TXLNBQ8N3L3 684 aa6.99□□□□□ -1.29
PDPN-205ENST00000487038 LRRC57Q8N9N7 239 aa6.99□□□□□ -1.29
PDPN-205ENST00000487038 OR2L5Q8NG80 312 aa6.99□□□□□ -1.29
PDPN-205ENST00000487038 OR10G3Q8NGC4 313 aa6.99□□□□□ -1.29
PDPN-205ENST00000487038 ZNF721Q8TF20 911 aa6.99□□□□□ -1.29
PDPN-205ENST00000487038 INTS12Q96CB8 462 aaKnown RBP6.99□□□□□ -1.29
PDPN-205ENST00000487038 FBXL8Q96CD0 374 aa6.99□□□□□ -1.29
PDPN-205ENST00000487038 MS4A6EQ96DS6 147 aa6.99□□□□□ -1.29
PDPN-205ENST00000487038 DTNBP1Q96EV8 351 aa6.99□□□□□ -1.29
PDPN-205ENST00000487038 LINGO1Q96FE5 620 aa6.99□□□□□ -1.29
PDPN-205ENST00000487038 WDYHV1Q96HA8 205 aa6.99□□□□□ -1.29
PDPN-205ENST00000487038 DGAT2Q96PD7 388 aa6.99□□□□□ -1.29
PDPN-205ENST00000487038 FAM111AQ96PZ2 611 aa6.99□□□□□ -1.29
PDPN-205ENST00000487038 GAL3ST4Q96RP7 486 aa6.99□□□□□ -1.29
PDPN-205ENST00000487038 CSF3RQ99062 836 aa6.99□□□□□ -1.29
PDPN-205ENST00000487038 FAM167BQ9BTA0 163 aa6.99□□□□□ -1.29
PDPN-205ENST00000487038 ROGDIQ9GZN7 287 aa6.99□□□□□ -1.29
PDPN-205ENST00000487038 REXO4Q9GZR2 422 aaKnown RBP6.99□□□□□ -1.29
PDPN-205ENST00000487038 KLHL28Q9NXS3 571 aa6.99□□□□□ -1.29
PDPN-205ENST00000487038 CNOT11Q9UKZ1 510 aaKnown RBP6.99□□□□□ -1.29
PDPN-205ENST00000487038 PACSIN2Q9UNF0 486 aaPredicted RBP6.99□□□□□ -1.29
PDPN-205ENST00000487038 C15orf41Q9Y2V0 281 aa6.99□□□□□ -1.29
PDPN-205ENST00000487038 SLC6A5Q9Y345 797 aa6.99□□□□□ -1.29
PDPN-205ENST00000487038 TENM1Q9UKZ4 2725 aa6.98□□□□□ -1.29
PDPN-205ENST00000487038 IQANK1A0A1B0GTG1 560 aa6.98□□□□□ -1.29
PDPN-205ENST00000487038 MAGEB16A2A368 324 aa6.98□□□□□ -1.29
PDPN-205ENST00000487038 LRIT2A6NDA9 550 aa6.98□□□□□ -1.29
PDPN-205ENST00000487038 A8MXE2 369 aa6.98□□□□□ -1.29
PDPN-205ENST00000487038 DEFB108AA8MXU0 73 aa6.98□□□□□ -1.29
PDPN-205ENST00000487038 RNF223E7ERA6 249 aa6.98□□□□□ -1.29
PDPN-205ENST00000487038 CYR61O00622 381 aa6.98□□□□□ -1.29
PDPN-205ENST00000487038 MSTNO14793 375 aa6.98□□□□□ -1.29
PDPN-205ENST00000487038 LDB3O75112 727 aa6.98□□□□□ -1.29
PDPN-205ENST00000487038 H2AFYO75367 372 aaKnown RBP6.98□□□□□ -1.29
PDPN-205ENST00000487038 TRIM3O75382 744 aaPredicted RBP6.98□□□□□ -1.29
PDPN-205ENST00000487038 CLEC3AO75596 197 aa6.98□□□□□ -1.29
PDPN-205ENST00000487038 SOX30O94993 753 aa6.98□□□□□ -1.29
PDPN-205ENST00000487038 LRATO95237 230 aa6.98□□□□□ -1.29
PDPN-205ENST00000487038 ZSCAN5DPP0CG00 497 aa6.98□□□□□ -1.29
PDPN-205ENST00000487038 GNAZP19086 355 aa6.98□□□□□ -1.29
PDPN-205ENST00000487038 HNRNPH1P31943 449 aaKnown RBP6.98□□□□□ -1.29
PDPN-205ENST00000487038 CD79BP40259 229 aa6.98□□□□□ -1.29
PDPN-205ENST00000487038 STT3AP46977 705 aa6.98□□□□□ -1.29
PDPN-205ENST00000487038 PLA2G16P53816 162 aa6.98□□□□□ -1.29
PDPN-205ENST00000487038 IL2P60568 153 aa6.98□□□□□ -1.29
PDPN-205ENST00000487038 FOXF2Q12947 444 aa6.98□□□□□ -1.29
PDPN-205ENST00000487038 PDAP1Q13442 181 aaKnown RBP6.98□□□□□ -1.29
PDPN-205ENST00000487038 TNK1Q13470 666 aa6.98□□□□□ -1.29
PDPN-205ENST00000487038 SNX1Q13596 522 aa6.98□□□□□ -1.29
PDPN-205ENST00000487038 CLEC12BQ2HXU8 276 aa6.98□□□□□ -1.29
PDPN-205ENST00000487038 C10orf62Q5T681 223 aaPredicted RBP6.98□□□□□ -1.29
PDPN-205ENST00000487038 OR2A2Q6IF42 318 aa6.98□□□□□ -1.29
PDPN-205ENST00000487038 TMIGD1Q6UXZ0 262 aa6.98□□□□□ -1.29
PDPN-205ENST00000487038 RNF111Q6ZNA4 994 aa6.98□□□□□ -1.29
PDPN-205ENST00000487038 THOC6Q86W42 341 aaKnown RBP6.98□□□□□ -1.29
PDPN-205ENST00000487038 GCNT2Q8N0V5 402 aa6.98□□□□□ -1.29
PDPN-205ENST00000487038 KRT78Q8N1N4 520 aa6.98□□□□□ -1.29
PDPN-205ENST00000487038 SRFBP1Q8NEF9 429 aaKnown RBP6.98□□□□□ -1.29
PDPN-205ENST00000487038 C1orf54Q8WWF1 131 aa6.98□□□□□ -1.29
PDPN-205ENST00000487038 ANKRD7Q92527 254 aa6.98□□□□□ -1.29
PDPN-205ENST00000487038 WNT2BQ93097 391 aa6.98□□□□□ -1.29
PDPN-205ENST00000487038 CAVIN3Q969G5 261 aa6.98□□□□□ -1.29
PDPN-205ENST00000487038 TRMT61AQ96FX7 289 aaKnown RBP6.98□□□□□ -1.29
PDPN-205ENST00000487038 FBXL20Q96IG2 436 aa6.98□□□□□ -1.29
PDPN-205ENST00000487038 RILPQ96NA2 401 aa6.98□□□□□ -1.29
PDPN-205ENST00000487038 PELOQ9BRX2 385 aaKnown RBP6.98□□□□□ -1.29
PDPN-205ENST00000487038 PITHD1Q9GZP4 211 aaPredicted RBP6.98□□□□□ -1.29
PDPN-205ENST00000487038 UBQLN3Q9H347 655 aa6.98□□□□□ -1.29
PDPN-205ENST00000487038 PROK2Q9HC23 129 aa6.98□□□□□ -1.29
PDPN-205ENST00000487038 LYRM4Q9HD34 91 aa6.98□□□□□ -1.29
PDPN-205ENST00000487038 PRM3Q9NNZ6 103 aa6.98□□□□□ -1.29
PDPN-205ENST00000487038 YAE1D1Q9NRH1 226 aa6.98□□□□□ -1.29
PDPN-205ENST00000487038 C20orf96Q9NUD7 363 aaPredicted RBP6.98□□□□□ -1.29
PDPN-205ENST00000487038 ZNF701Q9NV72 531 aaPredicted RBP6.98□□□□□ -1.29
PDPN-205ENST00000487038 PSD3Q9NYI0 1048 aa6.98□□□□□ -1.29
PDPN-205ENST00000487038 CDC42EP3Q9UKI2 254 aa6.98□□□□□ -1.29
PDPN-205ENST00000487038 CTAGE15A4D2H0 777 aa6.97□□□□□ -1.29
PDPN-205ENST00000487038 OR6C76A6NM76 312 aa6.97□□□□□ -1.29
PDPN-205ENST00000487038 A8MV72 311 aaPredicted RBP6.97□□□□□ -1.29
PDPN-205ENST00000487038 SNPHO15079 494 aa6.97□□□□□ -1.29
PDPN-205ENST00000487038 SIAH2O43255 324 aa6.97□□□□□ -1.29
PDPN-205ENST00000487038 SMNDC1O75940 238 aaKnown RBP eCLIP6.97□□□□□ -1.29
PDPN-205ENST00000487038 HAUS5O94927 633 aa6.97□□□□□ -1.29
PDPN-205ENST00000487038 ETHE1O95571 254 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms