RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 TNFRSF10DQ9UBN6 386 aa22.69■■□□□ 1.22
LIME1-206ENST00000487026 ASB4Q9Y574 426 aa22.69■■□□□ 1.22
LIME1-206ENST00000487026 A0A1W2PR48 441 aa22.68■■□□□ 1.22
LIME1-206ENST00000487026 TMPRSS11DO60235 418 aa22.68■■□□□ 1.22
LIME1-206ENST00000487026 GBAP04062 536 aa22.68■■□□□ 1.22
LIME1-206ENST00000487026 P04436 131 aa22.68■■□□□ 1.22
LIME1-206ENST00000487026 ELAVL4P26378 380 aaKnown RBP22.68■■□□□ 1.22
LIME1-206ENST00000487026 PHBP35232 272 aa22.68■■□□□ 1.22
LIME1-206ENST00000487026 PIGAP37287 484 aa22.68■■□□□ 1.22
LIME1-206ENST00000487026 PLIN5Q00G26 463 aa22.68■■□□□ 1.22
LIME1-206ENST00000487026 ZNF267Q14586 743 aaPredicted RBP22.68■■□□□ 1.22
LIME1-206ENST00000487026 MPEG1Q2M385 716 aa22.68■■□□□ 1.22
LIME1-206ENST00000487026 GXYLT1Q4G148 440 aa22.68■■□□□ 1.22
LIME1-206ENST00000487026 TMEM211Q6ICI0 200 aa22.68■■□□□ 1.22
LIME1-206ENST00000487026 RGS9BPQ6ZS82 235 aa22.68■■□□□ 1.22
LIME1-206ENST00000487026 GK5Q6ZS86 529 aa22.68■■□□□ 1.22
LIME1-206ENST00000487026 GOLM1Q8NBJ4 401 aa22.68■■□□□ 1.22
LIME1-206ENST00000487026 WDR20Q8TBZ3 569 aa22.68■■□□□ 1.22
LIME1-206ENST00000487026 REPS1Q96D71 796 aa22.68■■□□□ 1.22
LIME1-206ENST00000487026 CNPPD1Q9BV87 410 aa22.68■■□□□ 1.22
LIME1-206ENST00000487026 ACSS3Q9H6R3 686 aa22.68■■□□□ 1.22
LIME1-206ENST00000487026 NOL11Q9H8H0 719 aaKnown RBP22.68■■□□□ 1.22
LIME1-206ENST00000487026 IL1RL2Q9HB29 575 aa22.68■■□□□ 1.22
LIME1-206ENST00000487026 PNPLA3Q9NST1 481 aa22.68■■□□□ 1.22
LIME1-206ENST00000487026 RNF6Q9Y252 685 aa22.68■■□□□ 1.22
LIME1-206ENST00000487026 TNPO3Q9Y5L0 923 aaKnown RBP22.68■■□□□ 1.22
LIME1-206ENST00000487026 POLQO75417 2590 aa22.67■■□□□ 1.22
LIME1-206ENST00000487026 A0A0A6YYD5 115 aa22.67■■□□□ 1.22
LIME1-206ENST00000487026 CCDC189A1A4V9 331 aa22.67■■□□□ 1.22
LIME1-206ENST00000487026 DYRK3O43781 588 aa22.67■■□□□ 1.22
LIME1-206ENST00000487026 GPR75O95800 540 aa22.67■■□□□ 1.22
LIME1-206ENST00000487026 CELA3AP09093 270 aa22.67■■□□□ 1.22
LIME1-206ENST00000487026 FAM58BPP0C7Q3 252 aa22.67■■□□□ 1.22
LIME1-206ENST00000487026 ARL1P40616 181 aaPredicted RBP22.67■■□□□ 1.22
LIME1-206ENST00000487026 BUD31P41223 144 aaPredicted RBP22.67■■□□□ 1.22
LIME1-206ENST00000487026 HERVK_113P63132 956 aa22.67■■□□□ 1.22
LIME1-206ENST00000487026 ERVK-8P63133 956 aa22.67■■□□□ 1.22
LIME1-206ENST00000487026 PHEXP78562 749 aa22.67■■□□□ 1.22
LIME1-206ENST00000487026 PMPCAQ10713 525 aa22.67■■□□□ 1.22
LIME1-206ENST00000487026 FOXO1Q12778 655 aa22.67■■□□□ 1.22
LIME1-206ENST00000487026 BIKQ13323 160 aa22.67■■□□□ 1.22
LIME1-206ENST00000487026 TECRLQ5HYJ1 363 aa22.67■■□□□ 1.22
LIME1-206ENST00000487026 NDUFAF5Q5TEU4 345 aa22.67■■□□□ 1.22
LIME1-206ENST00000487026 MRM1Q6IN84 353 aaKnown RBP22.67■■□□□ 1.22
LIME1-206ENST00000487026 CYP20A1Q6UW02 462 aa22.67■■□□□ 1.22
LIME1-206ENST00000487026 CCDC71Q8IV32 467 aaPredicted RBP22.67■■□□□ 1.22
LIME1-206ENST00000487026 PTGR2Q8N8N7 351 aaPredicted RBP22.67■■□□□ 1.22
LIME1-206ENST00000487026 L3MBTL4Q8NA19 623 aa22.67■■□□□ 1.22
LIME1-206ENST00000487026 C7orf57Q8NEG2 295 aa22.67■■□□□ 1.22
LIME1-206ENST00000487026 NUBPLQ8TB37 319 aa22.67■■□□□ 1.22
LIME1-206ENST00000487026 ATP6V1E2Q96A05 226 aa22.67■■□□□ 1.22
LIME1-206ENST00000487026 PHF21BQ96EK2 531 aa22.67■■□□□ 1.22
LIME1-206ENST00000487026 FBXL20Q96IG2 436 aa22.67■■□□□ 1.22
LIME1-206ENST00000487026 SPOCK3Q9BQ16 436 aa22.67■■□□□ 1.22
LIME1-206ENST00000487026 ERVK-6Q9BXR3 956 aa22.67■■□□□ 1.22
LIME1-206ENST00000487026 UCK2Q9BZX2 261 aa22.67■■□□□ 1.22
LIME1-206ENST00000487026 DDX31Q9H8H2 851 aaKnown RBP22.67■■□□□ 1.22
LIME1-206ENST00000487026 LYARQ9NX58 379 aaKnown RBP22.67■■□□□ 1.22
LIME1-206ENST00000487026 ERVK-19Q9WJR5 959 aa22.67■■□□□ 1.22
LIME1-206ENST00000487026 DNAJC13O75165 2243 aa22.67■■□□□ 1.22
LIME1-206ENST00000487026 ATP6AP2A0A1C7CYW4 349 aa22.66■■□□□ 1.22
LIME1-206ENST00000487026 OR7A17O14581 309 aa22.66■■□□□ 1.22
LIME1-206ENST00000487026 OR10H2O60403 315 aa22.66■■□□□ 1.22
LIME1-206ENST00000487026 UGDHO60701 494 aa22.66■■□□□ 1.22
LIME1-206ENST00000487026 ATP6AP2O75787 350 aa22.66■■□□□ 1.22
LIME1-206ENST00000487026 URI1O94763 535 aaPredicted RBP22.66■■□□□ 1.22
LIME1-206ENST00000487026 CLDN9O95484 217 aa22.66■■□□□ 1.22
LIME1-206ENST00000487026 NADKO95544 446 aaPredicted RBP22.66■■□□□ 1.22
LIME1-206ENST00000487026 ACSL3O95573 720 aa22.66■■□□□ 1.22
LIME1-206ENST00000487026 KRTAP10-9P60411 292 aa22.66■■□□□ 1.22
LIME1-206ENST00000487026 CUL3Q13618 768 aa22.66■■□□□ 1.22
LIME1-206ENST00000487026 ZNF791Q3KP31 576 aaPredicted RBP22.66■■□□□ 1.22
LIME1-206ENST00000487026 MEX3BQ6ZN04 569 aaKnown RBP22.66■■□□□ 1.22
LIME1-206ENST00000487026 ST13P4Q8IZP2 240 aaPredicted RBP22.66■■□□□ 1.22
LIME1-206ENST00000487026 OR52B6Q8NGF0 335 aa22.66■■□□□ 1.22
LIME1-206ENST00000487026 GAL3ST4Q96RP7 486 aa22.66■■□□□ 1.22
LIME1-206ENST00000487026 SMC6Q96SB8 1091 aa22.66■■□□□ 1.22
LIME1-206ENST00000487026 DMGDHQ9UI17 866 aaKnown RBP22.66■■□□□ 1.22
LIME1-206ENST00000487026 IQANK1A0A1B0GTG1 560 aa22.65■■□□□ 1.22
LIME1-206ENST00000487026 A0A1W2PS29 197 aa22.65■■□□□ 1.22
LIME1-206ENST00000487026 NKX2-6A6NCS4 301 aa22.65■■□□□ 1.22
LIME1-206ENST00000487026 PGRMC2O15173 223 aa22.65■■□□□ 1.22
LIME1-206ENST00000487026 ARFIP1P53367 373 aa22.65■■□□□ 1.22
LIME1-206ENST00000487026 NUP107P57740 925 aa22.65■■□□□ 1.22
LIME1-206ENST00000487026 SLC22A10Q63ZE4 541 aa22.65■■□□□ 1.22
LIME1-206ENST00000487026 ZNF585AQ6P3V2 769 aa22.65■■□□□ 1.22
LIME1-206ENST00000487026 LYPD8Q6UX82 237 aa22.65■■□□□ 1.22
LIME1-206ENST00000487026 TRILQ7L0X0 811 aa22.65■■□□□ 1.22
LIME1-206ENST00000487026 FAM109AQ8N4B1 249 aa22.65■■□□□ 1.22
LIME1-206ENST00000487026 SLC22A8Q8TCC7 542 aa22.65■■□□□ 1.22
LIME1-206ENST00000487026 RND1Q92730 232 aa22.65■■□□□ 1.22
LIME1-206ENST00000487026 RIT1Q92963 219 aa22.65■■□□□ 1.22
LIME1-206ENST00000487026 ART5Q96L15 291 aa22.65■■□□□ 1.22
LIME1-206ENST00000487026 ENKD1Q9H0I2 346 aa22.65■■□□□ 1.22
LIME1-206ENST00000487026 CDC42EP4Q9H3Q1 356 aaKnown RBP22.65■■□□□ 1.22
LIME1-206ENST00000487026 TEP1Q99973 2627 aaKnown RBP22.64■■□□□ 1.22
LIME1-206ENST00000487026 FAM90A27PA6NNH2 459 aa22.64■■□□□ 1.21
LIME1-206ENST00000487026 FOXE1O00358 373 aaPredicted RBP22.64■■□□□ 1.21
LIME1-206ENST00000487026 AIFM1O95831 613 aa22.64■■□□□ 1.21
LIME1-206ENST00000487026 IGHG3P01860 377 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms