RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 SAMD11Q96NU1 681 aa12.59□□□□□ -0.39
HMGN1-216ENST00000486741 MCHR1Q99705 422 aa12.59□□□□□ -0.39
HMGN1-216ENST00000486741 NRTNQ99748 197 aa12.59□□□□□ -0.39
HMGN1-216ENST00000486741 TSSK6Q9BXA6 273 aa12.59□□□□□ -0.39
HMGN1-216ENST00000486741 TEX10Q9NXF1 929 aaPredicted RBP12.59□□□□□ -0.39
HMGN1-216ENST00000486741 CALML5Q9NZT1 146 aa12.59□□□□□ -0.39
HMGN1-216ENST00000486741 GPR34Q9UPC5 381 aa12.59□□□□□ -0.39
HMGN1-216ENST00000486741 WDR81Q562E7 1941 aa12.59□□□□□ -0.39
HMGN1-216ENST00000486741 OTOFQ9HC10 1997 aa12.59□□□□□ -0.39
HMGN1-216ENST00000486741 SLC5A10A0PJK1 596 aa12.59□□□□□ -0.39
HMGN1-216ENST00000486741 DUXAA6NLW8 204 aa12.59□□□□□ -0.39
HMGN1-216ENST00000486741 ALOX5P09917 674 aa12.59□□□□□ -0.39
HMGN1-216ENST00000486741 C7P10643 843 aa12.59□□□□□ -0.39
HMGN1-216ENST00000486741 CBLBQ13191 982 aa12.59□□□□□ -0.39
HMGN1-216ENST00000486741 PYDC2Q56P42 97 aa12.59□□□□□ -0.39
HMGN1-216ENST00000486741 EOGTQ5NDL2 527 aa12.59□□□□□ -0.39
HMGN1-216ENST00000486741 MLIPQ5VWP3 458 aa12.59□□□□□ -0.39
HMGN1-216ENST00000486741 FAAH2Q6GMR7 532 aa12.59□□□□□ -0.39
HMGN1-216ENST00000486741 PTRH1Q86Y79 214 aaKnown RBP12.59□□□□□ -0.39
HMGN1-216ENST00000486741 GAS2L1Q99501 681 aaPredicted RBP12.59□□□□□ -0.39
HMGN1-216ENST00000486741 H0Y8X5 98 aa12.58□□□□□ -0.4
HMGN1-216ENST00000486741 GAPDHSO14556 408 aaPredicted RBP12.58□□□□□ -0.4
HMGN1-216ENST00000486741 ARHGEF15O94989 841 aa12.58□□□□□ -0.4
HMGN1-216ENST00000486741 CLCN2P51788 898 aa12.58□□□□□ -0.4
HMGN1-216ENST00000486741 CTBSQ01459 385 aa12.58□□□□□ -0.4
HMGN1-216ENST00000486741 SYPL1Q16563 259 aa12.58□□□□□ -0.4
HMGN1-216ENST00000486741 ZC3H14Q6PJT7 736 aaKnown RBP12.58□□□□□ -0.4
HMGN1-216ENST00000486741 ABHD13Q7L211 337 aa12.58□□□□□ -0.4
HMGN1-216ENST00000486741 RANBP3LQ86VV4 465 aaPredicted RBP12.58□□□□□ -0.4
HMGN1-216ENST00000486741 FRMD1Q8N878 549 aa12.58□□□□□ -0.4
HMGN1-216ENST00000486741 WDR12Q9GZL7 423 aaKnown RBP12.58□□□□□ -0.4
HMGN1-216ENST00000486741 BTNL2Q9UIR0 455 aa12.58□□□□□ -0.4
HMGN1-216ENST00000486741 CEPT1Q9Y6K0 416 aa12.58□□□□□ -0.4
HMGN1-216ENST00000486741 FAM86C2PA6NEL3 165 aa12.58□□□□□ -0.4
HMGN1-216ENST00000486741 GRXCR2A6NFK2 248 aa12.58□□□□□ -0.4
HMGN1-216ENST00000486741 FAM227AF5H4B4 570 aa12.58□□□□□ -0.4
HMGN1-216ENST00000486741 RNASET2O00584 256 aaKnown RBP12.58□□□□□ -0.4
HMGN1-216ENST00000486741 SDC3O75056 442 aa12.58□□□□□ -0.4
HMGN1-216ENST00000486741 ZNF821O75541 412 aaPredicted RBP12.58□□□□□ -0.4
HMGN1-216ENST00000486741 HMGN2P05204 90 aaKnown RBP12.58□□□□□ -0.4
HMGN1-216ENST00000486741 CNR2P34972 360 aa12.58□□□□□ -0.4
HMGN1-216ENST00000486741 MC3RP41968 323 aa12.58□□□□□ -0.4
HMGN1-216ENST00000486741 GAB1Q13480 694 aa12.58□□□□□ -0.4
HMGN1-216ENST00000486741 ZNF750Q32MQ0 723 aa12.58□□□□□ -0.4
HMGN1-216ENST00000486741 LEXMQ3ZCV2 418 aa12.58□□□□□ -0.4
HMGN1-216ENST00000486741 DDI2Q5TDH0 399 aa12.58□□□□□ -0.4
HMGN1-216ENST00000486741 ACOT4Q8N9L9 421 aa12.58□□□□□ -0.4
HMGN1-216ENST00000486741 ZNF671Q8TAW3 534 aa12.58□□□□□ -0.4
HMGN1-216ENST00000486741 KLHDC7BQ96G42 594 aa12.58□□□□□ -0.4
HMGN1-216ENST00000486741 OR4K3Q96R72 315 aa12.58□□□□□ -0.4
HMGN1-216ENST00000486741 ITPAQ9BY32 194 aa12.58□□□□□ -0.4
HMGN1-216ENST00000486741 GSDMCQ9BYG8 508 aa12.58□□□□□ -0.4
HMGN1-216ENST00000486741 QRSL1Q9H0R6 528 aaKnown RBP12.58□□□□□ -0.4
HMGN1-216ENST00000486741 ACTL8Q9H568 366 aa12.58□□□□□ -0.4
HMGN1-216ENST00000486741 PNO1Q9NRX1 252 aaKnown RBP12.58□□□□□ -0.4
HMGN1-216ENST00000486741 ITGB1BP2Q9UKP3 347 aa12.58□□□□□ -0.4
HMGN1-216ENST00000486741 PTPRZ1P23471 2315 aaPredicted RBP12.58□□□□□ -0.4
HMGN1-216ENST00000486741 WASHC1A8K0Z3 465 aa12.58□□□□□ -0.4
HMGN1-216ENST00000486741 PCDH17O14917 1159 aa12.58□□□□□ -0.4
HMGN1-216ENST00000486741 NDUFB5O43674 189 aa12.58□□□□□ -0.4
HMGN1-216ENST00000486741 OR6A2O95222 327 aa12.58□□□□□ -0.4
HMGN1-216ENST00000486741 PCSK6P29122 969 aa12.58□□□□□ -0.4
HMGN1-216ENST00000486741 C21orf33P30042 268 aaPredicted RBP12.58□□□□□ -0.4
HMGN1-216ENST00000486741 SLC6A12P48065 614 aa12.58□□□□□ -0.4
HMGN1-216ENST00000486741 DCDC1P59894 354 aa12.58□□□□□ -0.4
HMGN1-216ENST00000486741 WASH2PQ6VEQ5 465 aa12.58□□□□□ -0.4
HMGN1-216ENST00000486741 GATSQ8NAP1 163 aa12.58□□□□□ -0.4
HMGN1-216ENST00000486741 OR9A2Q8NGT5 310 aa12.58□□□□□ -0.4
HMGN1-216ENST00000486741 OR56A3Q8NH54 315 aa12.58□□□□□ -0.4
HMGN1-216ENST00000486741 ZNF300Q96RE9 604 aaPredicted RBP12.58□□□□□ -0.4
HMGN1-216ENST00000486741 ANKRA2Q9H9E1 313 aa12.58□□□□□ -0.4
HMGN1-216ENST00000486741 ANKMY1Q9P2S6 941 aa12.58□□□□□ -0.4
HMGN1-216ENST00000486741 CRNNQ9UBG3 495 aaPredicted RBP12.58□□□□□ -0.4
HMGN1-216ENST00000486741 DDCP20711 480 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 BLKP51451 505 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 BLVRAP53004 296 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 RPA4Q13156 261 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 GGTA1PQ4G0N0 100 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 C10orf62Q5T681 223 aaPredicted RBP12.57□□□□□ -0.4
HMGN1-216ENST00000486741 LCTLQ6UWM7 567 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 FAM131AQ6UXB0 335 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 CHDHQ8NE62 594 aaPredicted RBP12.57□□□□□ -0.4
HMGN1-216ENST00000486741 OR56A1Q8NGH5 318 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 ENKURQ8TC29 256 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 MVB12BQ9H7P6 319 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 RNF6Q9Y252 685 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 GPR52Q9Y2T5 361 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 PRAMEF33A0A0G2JMD5 474 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 H3BMQ9 156 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 CLPXO76031 633 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 ATE1O95260 518 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 HIST1H2ABP04908 130 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 SMIM18P0DKX4 95 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 PHC1P78364 1004 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 MESP2Q0VG99 397 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 ZNF267Q14586 743 aaPredicted RBP12.57□□□□□ -0.4
HMGN1-216ENST00000486741 C6orf132Q5T0Z8 1188 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 HIST3H2AQ7L7L0 130 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 SPRED1Q7Z699 444 aa12.57□□□□□ -0.4
HMGN1-216ENST00000486741 SPARTQ8N0X7 666 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms