RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 COX6A1P12074 109 aa10.67□□□□□ -0.7
NUP50-216ENST00000486184 ICAM2P13598 275 aa10.67□□□□□ -0.7
NUP50-216ENST00000486184 PORP16435 677 aaPredicted RBP10.67□□□□□ -0.7
NUP50-216ENST00000486184 CSNK2A2P19784 350 aaPredicted RBP10.67□□□□□ -0.7
NUP50-216ENST00000486184 TACR1P25103 407 aa10.67□□□□□ -0.7
NUP50-216ENST00000486184 NTSP30990 170 aa10.67□□□□□ -0.7
NUP50-216ENST00000486184 STT3AP46977 705 aa10.67□□□□□ -0.7
NUP50-216ENST00000486184 XKP51811 444 aa10.67□□□□□ -0.7
NUP50-216ENST00000486184 GYS2P54840 703 aa10.67□□□□□ -0.7
NUP50-216ENST00000486184 STX1BP61266 288 aa10.67□□□□□ -0.7
NUP50-216ENST00000486184 GNGT1P63211 74 aa10.67□□□□□ -0.7
NUP50-216ENST00000486184 PTGR1Q14914 329 aa10.67□□□□□ -0.7
NUP50-216ENST00000486184 ELAVL1Q15717 326 aaKnown RBP10.67□□□□□ -0.7
NUP50-216ENST00000486184 EXT1Q16394 746 aa10.67□□□□□ -0.7
NUP50-216ENST00000486184 FAM71E1Q6IPT2 247 aa10.67□□□□□ -0.7
NUP50-216ENST00000486184 PAPD4Q6PIY7 484 aaKnown RBP10.67□□□□□ -0.7
NUP50-216ENST00000486184 RIPOR1Q6ZS17 1223 aa10.67□□□□□ -0.7
NUP50-216ENST00000486184 GPR155Q7Z3F1 870 aa10.67□□□□□ -0.7
NUP50-216ENST00000486184 MAVSQ7Z434 540 aa10.67□□□□□ -0.7
NUP50-216ENST00000486184 TICAM1Q8IUC6 712 aa10.67□□□□□ -0.7
NUP50-216ENST00000486184 ST13P4Q8IZP2 240 aaPredicted RBP10.67□□□□□ -0.7
NUP50-216ENST00000486184 MMP21Q8N119 569 aa10.67□□□□□ -0.7
NUP50-216ENST00000486184 DNAJB14Q8TBM8 379 aa10.67□□□□□ -0.7
NUP50-216ENST00000486184 DAZLQ92904 295 aaKnown RBP10.67□□□□□ -0.7
NUP50-216ENST00000486184 ANKRD9Q96BM1 317 aaPredicted RBP10.67□□□□□ -0.7
NUP50-216ENST00000486184 PPCDCQ96CD2 204 aa10.67□□□□□ -0.7
NUP50-216ENST00000486184 MTERF3Q96E29 417 aa10.67□□□□□ -0.7
NUP50-216ENST00000486184 CHMP6Q96FZ7 201 aa10.67□□□□□ -0.7
NUP50-216ENST00000486184 MAELQ96JY0 434 aaKnown RBP10.67□□□□□ -0.7
NUP50-216ENST00000486184 EGLN2Q96KS0 407 aa10.67□□□□□ -0.7
NUP50-216ENST00000486184 BBS4Q96RK4 519 aa10.67□□□□□ -0.7
NUP50-216ENST00000486184 ZBTB18Q99592 522 aa10.67□□□□□ -0.7
NUP50-216ENST00000486184 DPY30Q9C005 99 aa10.67□□□□□ -0.7
NUP50-216ENST00000486184 ZNF700Q9H0M5 742 aa10.67□□□□□ -0.7
NUP50-216ENST00000486184 REEP4Q9H6H4 257 aa10.67□□□□□ -0.7
NUP50-216ENST00000486184 ZNF160Q9HCG1 818 aa10.67□□□□□ -0.7
NUP50-216ENST00000486184 ATP13A2Q9NQ11 1180 aa10.67□□□□□ -0.7
NUP50-216ENST00000486184 ATAD3AQ9NVI7 634 aa10.67□□□□□ -0.7
NUP50-216ENST00000486184 SH3BP4Q9P0V3 963 aa10.67□□□□□ -0.7
NUP50-216ENST00000486184 C5AR2Q9P296 337 aa10.67□□□□□ -0.7
NUP50-216ENST00000486184 HEY2Q9UBP5 337 aa10.67□□□□□ -0.7
NUP50-216ENST00000486184 MAP1BP46821 2468 aaKnown RBP10.67□□□□□ -0.7
NUP50-216ENST00000486184 FRYQ5TBA9 3013 aa10.67□□□□□ -0.7
NUP50-216ENST00000486184 SAGE2PA6NJ88 616 aa10.66□□□□□ -0.7
NUP50-216ENST00000486184 C17orf105B2RV13 164 aa10.66□□□□□ -0.7
NUP50-216ENST00000486184 E9PBE3 544 aa10.66□□□□□ -0.7
NUP50-216ENST00000486184 ZNF195O14628 629 aa10.66□□□□□ -0.7
NUP50-216ENST00000486184 PDPK1O15530 556 aa10.66□□□□□ -0.7
NUP50-216ENST00000486184 KLHL41O60662 606 aa10.66□□□□□ -0.7
NUP50-216ENST00000486184 SLC35E2P0CK97 266 aa10.66□□□□□ -0.7
NUP50-216ENST00000486184 CPMP14384 443 aa10.66□□□□□ -0.7
NUP50-216ENST00000486184 IDO1P14902 403 aa10.66□□□□□ -0.7
NUP50-216ENST00000486184 PRPS1L1P21108 318 aa10.66□□□□□ -0.7
NUP50-216ENST00000486184 ITGA3P26006 1051 aa10.66□□□□□ -0.7
NUP50-216ENST00000486184 FEN1P39748 380 aaKnown RBP10.66□□□□□ -0.7
NUP50-216ENST00000486184 IDH3AP50213 366 aa10.66□□□□□ -0.7
NUP50-216ENST00000486184 PGDP52209 483 aa10.66□□□□□ -0.7
NUP50-216ENST00000486184 EFNA3P52797 238 aa10.66□□□□□ -0.7
NUP50-216ENST00000486184 CLNS1AP54105 237 aaKnown RBP10.66□□□□□ -0.7
NUP50-216ENST00000486184 DIO3P55073 304 aa10.66□□□□□ -0.7
NUP50-216ENST00000486184 IGLV3-21P80748 117 aaPredicted RBP10.66□□□□□ -0.7
NUP50-216ENST00000486184 AIMP2Q13155 320 aaKnown RBP10.66□□□□□ -0.7
NUP50-216ENST00000486184 PCOLCEQ15113 449 aa10.66□□□□□ -0.7
NUP50-216ENST00000486184 TERF2Q15554 542 aa10.66□□□□□ -0.7
NUP50-216ENST00000486184 GSTA3Q16772 222 aa10.66□□□□□ -0.7
NUP50-216ENST00000486184 BTBD16Q32M84 506 aa10.66□□□□□ -0.7
NUP50-216ENST00000486184 LSM12Q3MHD2 195 aaKnown RBP10.66□□□□□ -0.7
NUP50-216ENST00000486184 DCAF10Q5QP82 559 aa10.66□□□□□ -0.7
NUP50-216ENST00000486184 BORAQ6PGQ7 559 aa10.66□□□□□ -0.7
NUP50-216ENST00000486184 C19orf48Q6RUI8 117 aa10.66□□□□□ -0.7
NUP50-216ENST00000486184 LRRC25Q8N386 305 aaPredicted RBP10.66□□□□□ -0.7
NUP50-216ENST00000486184 OR14A16Q8NHC5 309 aa10.66□□□□□ -0.7
NUP50-216ENST00000486184 ZFP28Q8NHY6 868 aa10.66□□□□□ -0.7
NUP50-216ENST00000486184 APOBEC4Q8WW27 367 aaKnown RBP10.66□□□□□ -0.7
NUP50-216ENST00000486184 UCN3Q969E3 161 aa10.66□□□□□ -0.7
NUP50-216ENST00000486184 ART5Q96L15 291 aa10.66□□□□□ -0.7
NUP50-216ENST00000486184 OR52B2Q96RD2 323 aa10.66□□□□□ -0.7
NUP50-216ENST00000486184 EBF4Q9BQW3 602 aa10.66□□□□□ -0.7
NUP50-216ENST00000486184 ARHGAP9Q9BRR9 750 aa10.66□□□□□ -0.7
NUP50-216ENST00000486184 CCDC28BQ9BUN5 200 aa10.66□□□□□ -0.7
NUP50-216ENST00000486184 ING2Q9H160 280 aa10.66□□□□□ -0.7
NUP50-216ENST00000486184 SLC35C2Q9NQQ7 365 aa10.66□□□□□ -0.7
NUP50-216ENST00000486184 AIG1Q9NVV5 245 aa10.66□□□□□ -0.7
NUP50-216ENST00000486184 COPS7AQ9UBW8 275 aa10.66□□□□□ -0.7
NUP50-216ENST00000486184 TRIM33Q9UPN9 1127 aa10.66□□□□□ -0.7
NUP50-216ENST00000486184 A0A1W2PQ72 361 aa10.65□□□□□ -0.7
NUP50-216ENST00000486184 WASHC1A8K0Z3 465 aa10.65□□□□□ -0.7
NUP50-216ENST00000486184 TGFBR3LH3BV60 316 aa10.65□□□□□ -0.7
NUP50-216ENST00000486184 SCAMP2O15127 329 aaKnown RBP10.65□□□□□ -0.7
NUP50-216ENST00000486184 ITGB2P05107 769 aa10.65□□□□□ -0.7
NUP50-216ENST00000486184 NT5EP21589 574 aa10.65□□□□□ -0.7
NUP50-216ENST00000486184 LSP1P33241 339 aa10.65□□□□□ -0.7
NUP50-216ENST00000486184 MPIP34949 423 aa10.65□□□□□ -0.7
NUP50-216ENST00000486184 ARFIP2P53365 341 aa10.65□□□□□ -0.7
NUP50-216ENST00000486184 NME5P56597 212 aa10.65□□□□□ -0.7
NUP50-216ENST00000486184 CLDN8P56748 225 aa10.65□□□□□ -0.7
NUP50-216ENST00000486184 CHAF1BQ13112 559 aa10.65□□□□□ -0.7
NUP50-216ENST00000486184 COL28A1Q2UY09 1125 aa10.65□□□□□ -0.7
NUP50-216ENST00000486184 CPTPQ5TA50 214 aa10.65□□□□□ -0.7
NUP50-216ENST00000486184 CPLX4Q7Z7G2 160 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms