RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 PRAMEF20Q5VT98 475 aa17.74■□□□□ 0.43
COL27A1-205ENST00000485397 SLC22A10Q63ZE4 541 aa17.74■□□□□ 0.43
COL27A1-205ENST00000485397 MAATS1Q7Z4T9 603 aa17.74■□□□□ 0.43
COL27A1-205ENST00000485397 TBC1D1Q86TI0 1168 aaPredicted RBP17.74■□□□□ 0.43
COL27A1-205ENST00000485397 GPR180Q86V85 440 aa17.74■□□□□ 0.43
COL27A1-205ENST00000485397 SPATA4Q8NEY3 305 aa17.74■□□□□ 0.43
COL27A1-205ENST00000485397 SLC22A8Q8TCC7 542 aa17.74■□□□□ 0.43
COL27A1-205ENST00000485397 RGMAQ96B86 450 aa17.74■□□□□ 0.43
COL27A1-205ENST00000485397 EXO5Q9H790 373 aa17.74■□□□□ 0.43
COL27A1-205ENST00000485397 DMRT3Q9NQL9 472 aa17.74■□□□□ 0.43
COL27A1-205ENST00000485397 ALKBH4Q9NXW9 302 aa17.74■□□□□ 0.43
COL27A1-205ENST00000485397 SPRR3Q9UBC9 169 aa17.74■□□□□ 0.43
COL27A1-205ENST00000485397 Q9UFV3 132 aa17.74■□□□□ 0.43
COL27A1-205ENST00000485397 TRGV5A0A0B4J1U4 118 aa17.73■□□□□ 0.43
COL27A1-205ENST00000485397 SUSD5O60279 629 aa17.73■□□□□ 0.43
COL27A1-205ENST00000485397 RFPL3SP0C7P2 107 aa17.73■□□□□ 0.43
COL27A1-205ENST00000485397 ALOX15P16050 662 aaPredicted RBP17.73■□□□□ 0.43
COL27A1-205ENST00000485397 EPB42P16452 691 aa17.73■□□□□ 0.43
COL27A1-205ENST00000485397 ENDOUP21128 410 aaKnown RBP17.73■□□□□ 0.43
COL27A1-205ENST00000485397 CRABP2P29373 138 aa17.73■□□□□ 0.43
COL27A1-205ENST00000485397 PLTPP55058 493 aa17.73■□□□□ 0.43
COL27A1-205ENST00000485397 RPS13P62277 151 aaKnown RBP17.73■□□□□ 0.43
COL27A1-205ENST00000485397 HERVK_113P63132 956 aa17.73■□□□□ 0.43
COL27A1-205ENST00000485397 ERVK-8P63133 956 aa17.73■□□□□ 0.43
COL27A1-205ENST00000485397 PLIN5Q00G26 463 aa17.73■□□□□ 0.43
COL27A1-205ENST00000485397 TNFRSF17Q02223 184 aa17.73■□□□□ 0.43
COL27A1-205ENST00000485397 C2orf54Q08AI8 447 aa17.73■□□□□ 0.43
COL27A1-205ENST00000485397 TRADDQ15628 312 aa17.73■□□□□ 0.43
COL27A1-205ENST00000485397 C1orf185Q5T7R7 199 aa17.73■□□□□ 0.43
COL27A1-205ENST00000485397 CCDC25Q86WR0 208 aa17.73■□□□□ 0.43
COL27A1-205ENST00000485397 MYLK4Q86YV6 388 aaPredicted RBP17.73■□□□□ 0.43
COL27A1-205ENST00000485397 C7orf57Q8NEG2 295 aa17.73■□□□□ 0.43
COL27A1-205ENST00000485397 FBF1Q8TES7 1133 aa17.73■□□□□ 0.43
COL27A1-205ENST00000485397 PAQR8Q8TEZ7 354 aa17.73■□□□□ 0.43
COL27A1-205ENST00000485397 KCTD4Q8WVF5 259 aa17.73■□□□□ 0.43
COL27A1-205ENST00000485397 TANKQ92844 425 aa17.73■□□□□ 0.43
COL27A1-205ENST00000485397 SARAFQ96BY9 339 aa17.73■□□□□ 0.43
COL27A1-205ENST00000485397 SPACA9Q96E40 222 aaPredicted RBP17.73■□□□□ 0.43
COL27A1-205ENST00000485397 FBXL20Q96IG2 436 aa17.73■□□□□ 0.43
COL27A1-205ENST00000485397 MTERF1Q99551 399 aaKnown RBP17.73■□□□□ 0.43
COL27A1-205ENST00000485397 ERVK-6Q9BXR3 956 aa17.73■□□□□ 0.43
COL27A1-205ENST00000485397 PROK2Q9HC23 129 aa17.73■□□□□ 0.43
COL27A1-205ENST00000485397 MS4A12Q9NXJ0 267 aa17.73■□□□□ 0.43
COL27A1-205ENST00000485397 KCNN3Q9UGI6 736 aa17.73■□□□□ 0.43
COL27A1-205ENST00000485397 ADGRE2Q9UHX3 823 aa17.73■□□□□ 0.43
COL27A1-205ENST00000485397 PHF11Q9UIL8 331 aa17.73■□□□□ 0.43
COL27A1-205ENST00000485397 ERVK-19Q9WJR5 959 aa17.73■□□□□ 0.43
COL27A1-205ENST00000485397 SPG11Q96JI7 2443 aa17.73■□□□□ 0.43
COL27A1-205ENST00000485397 LRRC14BA6NHZ5 514 aa17.72■□□□□ 0.43
COL27A1-205ENST00000485397 DYRK3O43781 588 aa17.72■□□□□ 0.43
COL27A1-205ENST00000485397 HCN1O60741 890 aa17.72■□□□□ 0.43
COL27A1-205ENST00000485397 WDR1O75083 606 aa17.72■□□□□ 0.43
COL27A1-205ENST00000485397 LRATO95237 230 aa17.72■□□□□ 0.43
COL27A1-205ENST00000485397 PIK3CBP42338 1070 aa17.72■□□□□ 0.43
COL27A1-205ENST00000485397 MAGEA4P43358 317 aa17.72■□□□□ 0.43
COL27A1-205ENST00000485397 DLX5P56178 289 aa17.72■□□□□ 0.43
COL27A1-205ENST00000485397 IRF9Q00978 393 aa17.72■□□□□ 0.43
COL27A1-205ENST00000485397 MYBPHQ13203 477 aa17.72■□□□□ 0.43
COL27A1-205ENST00000485397 ZNF267Q14586 743 aaPredicted RBP17.72■□□□□ 0.43
COL27A1-205ENST00000485397 WLSQ5T9L3 541 aa17.72■□□□□ 0.43
COL27A1-205ENST00000485397 CES4AQ5XG92 561 aa17.72■□□□□ 0.43
COL27A1-205ENST00000485397 TMEM200AQ86VY9 491 aa17.72■□□□□ 0.43
COL27A1-205ENST00000485397 CENPLQ8N0S6 344 aaPredicted RBP17.72■□□□□ 0.43
COL27A1-205ENST00000485397 CLYBLQ8N0X4 340 aa17.72■□□□□ 0.43
COL27A1-205ENST00000485397 ZCCHC7Q8N3Z6 543 aaKnown RBP17.72■□□□□ 0.43
COL27A1-205ENST00000485397 OR10G3Q8NGC4 313 aa17.72■□□□□ 0.43
COL27A1-205ENST00000485397 NRGNQ92686 78 aa17.72■□□□□ 0.43
COL27A1-205ENST00000485397 UCN3Q969E3 161 aa17.72■□□□□ 0.43
COL27A1-205ENST00000485397 ART5Q96L15 291 aa17.72■□□□□ 0.43
COL27A1-205ENST00000485397 GAL3ST4Q96RP7 486 aa17.72■□□□□ 0.43
COL27A1-205ENST00000485397 ZNF717Q9BY31 904 aaPredicted RBP17.72■□□□□ 0.43
COL27A1-205ENST00000485397 ZNF703Q9H7S9 590 aaPredicted RBP17.72■□□□□ 0.43
COL27A1-205ENST00000485397 ANGPTL3Q9Y5C1 460 aa17.72■□□□□ 0.43
COL27A1-205ENST00000485397 IQANK1A0A1B0GTG1 560 aa17.71■□□□□ 0.43
COL27A1-205ENST00000485397 LRRC3CA6NJW4 275 aa17.71■□□□□ 0.43
COL27A1-205ENST00000485397 GLOD5A6NK44 160 aa17.71■□□□□ 0.43
COL27A1-205ENST00000485397 PROM1O43490 865 aa17.71■□□□□ 0.43
COL27A1-205ENST00000485397 TMPRSS11DO60235 418 aa17.71■□□□□ 0.43
COL27A1-205ENST00000485397 EEDO75530 441 aaKnown RBP17.71■□□□□ 0.43
COL27A1-205ENST00000485397 GPR75O95800 540 aa17.71■□□□□ 0.43
COL27A1-205ENST00000485397 TLX1P31314 330 aaPredicted RBP17.71■□□□□ 0.43
COL27A1-205ENST00000485397 KCNJ2P63252 427 aa17.71■□□□□ 0.43
COL27A1-205ENST00000485397 BIKQ13323 160 aa17.71■□□□□ 0.43
COL27A1-205ENST00000485397 MRM1Q6IN84 353 aaKnown RBP17.71■□□□□ 0.43
COL27A1-205ENST00000485397 ST13P4Q8IZP2 240 aaPredicted RBP17.71■□□□□ 0.43
COL27A1-205ENST00000485397 SLC15A4Q8N697 577 aa17.71■□□□□ 0.43
COL27A1-205ENST00000485397 FAM13CQ8NE31 585 aa17.71■□□□□ 0.43
COL27A1-205ENST00000485397 FBXO25Q8TCJ0 367 aa17.71■□□□□ 0.43
COL27A1-205ENST00000485397 CENPKQ9BS16 269 aa17.71■□□□□ 0.43
COL27A1-205ENST00000485397 ACTR8Q9H981 624 aa17.71■□□□□ 0.43
COL27A1-205ENST00000485397 ZFP64Q9NPA5 681 aa17.71■□□□□ 0.43
COL27A1-205ENST00000485397 BOKQ9UMX3 212 aaPredicted RBP17.71■□□□□ 0.43
COL27A1-205ENST00000485397 ACOT9Q9Y305 439 aa17.71■□□□□ 0.43
COL27A1-205ENST00000485397 ASB4Q9Y574 426 aa17.71■□□□□ 0.43
COL27A1-205ENST00000485397 A0A1W2PR48 441 aa17.7■□□□□ 0.42
COL27A1-205ENST00000485397 OR10H2O60403 315 aa17.7■□□□□ 0.42
COL27A1-205ENST00000485397 CLPSP04118 112 aa17.7■□□□□ 0.42
COL27A1-205ENST00000485397 FBXO45P0C2W1 286 aa17.7■□□□□ 0.42
COL27A1-205ENST00000485397 STX2P32856 288 aa17.7■□□□□ 0.42
COL27A1-205ENST00000485397 BSGP35613 385 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms