RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 CHTF18Q8WVB6 975 aa17.82■□□□□ 0.44
SNX17-206ENST00000484886 TRMOQ9BU70 441 aa17.82■□□□□ 0.44
SNX17-206ENST00000484886 CNPPD1Q9BV87 410 aa17.82■□□□□ 0.44
SNX17-206ENST00000484886 FAIM2Q9BWQ8 316 aa17.82■□□□□ 0.44
SNX17-206ENST00000484886 KLHL1Q9NR64 748 aa17.82■□□□□ 0.44
SNX17-206ENST00000484886 ZNF223Q9UK11 482 aaPredicted RBP17.82■□□□□ 0.44
SNX17-206ENST00000484886 BAHCC1Q9P281 2608 aa17.82■□□□□ 0.44
SNX17-206ENST00000484886 DDAH2O95865 285 aa17.81■□□□□ 0.44
SNX17-206ENST00000484886 CD46P15529 392 aa17.81■□□□□ 0.44
SNX17-206ENST00000484886 CYB561P49447 251 aa17.81■□□□□ 0.44
SNX17-206ENST00000484886 GPR143P51810 404 aa17.81■□□□□ 0.44
SNX17-206ENST00000484886 ZNF267Q14586 743 aaPredicted RBP17.81■□□□□ 0.44
SNX17-206ENST00000484886 SPINK14Q6IE38 97 aa17.81■□□□□ 0.44
SNX17-206ENST00000484886 LRIG3Q6UXM1 1119 aa17.81■□□□□ 0.44
SNX17-206ENST00000484886 TMEM156Q8N614 296 aa17.81■□□□□ 0.44
SNX17-206ENST00000484886 ZNF321PQ8N8H1 164 aa17.81■□□□□ 0.44
SNX17-206ENST00000484886 OR4K14Q8NGD5 310 aa17.81■□□□□ 0.44
SNX17-206ENST00000484886 CDC26Q8NHZ8 85 aa17.81■□□□□ 0.44
SNX17-206ENST00000484886 PPP1R14CQ8TAE6 165 aa17.81■□□□□ 0.44
SNX17-206ENST00000484886 GRHL3Q8TE85 626 aa17.81■□□□□ 0.44
SNX17-206ENST00000484886 RIT1Q92963 219 aa17.81■□□□□ 0.44
SNX17-206ENST00000484886 APIPQ96GX9 242 aa17.81■□□□□ 0.44
SNX17-206ENST00000484886 ART5Q96L15 291 aa17.81■□□□□ 0.44
SNX17-206ENST00000484886 SIGLEC12Q96PQ1 595 aa17.81■□□□□ 0.44
SNX17-206ENST00000484886 EBPLQ9BY08 206 aa17.81■□□□□ 0.44
SNX17-206ENST00000484886 LIN28AQ9H9Z2 209 aaKnown RBP17.81■□□□□ 0.44
SNX17-206ENST00000484886 EML4Q9HC35 981 aaKnown RBP17.81■□□□□ 0.44
SNX17-206ENST00000484886 TNFRSF12AQ9NP84 129 aa17.81■□□□□ 0.44
SNX17-206ENST00000484886 LRFN1Q9P244 771 aa17.81■□□□□ 0.44
SNX17-206ENST00000484886 MCM8Q9UJA3 840 aa17.81■□□□□ 0.44
SNX17-206ENST00000484886 NTNG1Q9Y2I2 539 aa17.81■□□□□ 0.44
SNX17-206ENST00000484886 C1orf226A1L170 272 aa17.8■□□□□ 0.44
SNX17-206ENST00000484886 AZIN1O14977 448 aa17.8■□□□□ 0.44
SNX17-206ENST00000484886 TYROBPO43914 113 aa17.8■□□□□ 0.44
SNX17-206ENST00000484886 PRKNO60260 465 aaPredicted RBP17.8■□□□□ 0.44
SNX17-206ENST00000484886 NPHS1O60500 1241 aa17.8■□□□□ 0.44
SNX17-206ENST00000484886 ITGA10O75578 1167 aa17.8■□□□□ 0.44
SNX17-206ENST00000484886 ERAL1O75616 437 aaKnown RBP17.8■□□□□ 0.44
SNX17-206ENST00000484886 CHEK2O96017 543 aa17.8■□□□□ 0.44
SNX17-206ENST00000484886 GNLYP22749 145 aa17.8■□□□□ 0.44
SNX17-206ENST00000484886 SSR4P51571 173 aa17.8■□□□□ 0.44
SNX17-206ENST00000484886 ERVK-8P63133 956 aa17.8■□□□□ 0.44
SNX17-206ENST00000484886 NR6A1Q15406 480 aa17.8■□□□□ 0.44
SNX17-206ENST00000484886 INAQ16352 499 aa17.8■□□□□ 0.44
SNX17-206ENST00000484886 RPUSD3Q6P087 351 aaKnown RBP17.8■□□□□ 0.44
SNX17-206ENST00000484886 DGAT2L6Q6ZPD8 337 aa17.8■□□□□ 0.44
SNX17-206ENST00000484886 ZCCHC23Q6ZST2 131 aa17.8■□□□□ 0.44
SNX17-206ENST00000484886 MMP21Q8N119 569 aa17.8■□□□□ 0.44
SNX17-206ENST00000484886 TM4SF18Q96CE8 201 aa17.8■□□□□ 0.44
SNX17-206ENST00000484886 KLHL29Q96CT2 875 aa17.8■□□□□ 0.44
SNX17-206ENST00000484886 SENP5Q96HI0 755 aaPredicted RBP17.8■□□□□ 0.44
SNX17-206ENST00000484886 KCNK9Q9NPC2 374 aa17.8■□□□□ 0.44
SNX17-206ENST00000484886 RRAGDQ9NQL2 400 aaPredicted RBP17.8■□□□□ 0.44
SNX17-206ENST00000484886 PFDN4Q9NQP4 134 aa17.8■□□□□ 0.44
SNX17-206ENST00000484886 ERVK-19Q9WJR5 959 aa17.8■□□□□ 0.44
SNX17-206ENST00000484886 PCDHA9Q9Y5H5 950 aa17.8■□□□□ 0.44
SNX17-206ENST00000484886 SHANK1Q9Y566 2161 aa17.79■□□□□ 0.44
SNX17-206ENST00000484886 GOLGA6L10A6NI86 522 aa17.79■□□□□ 0.44
SNX17-206ENST00000484886 TCP11X1B4DZS4 312 aa17.79■□□□□ 0.44
SNX17-206ENST00000484886 WWP2O00308 870 aa17.79■□□□□ 0.44
SNX17-206ENST00000484886 OR2J2O76002 312 aa17.79■□□□□ 0.44
SNX17-206ENST00000484886 RASAL1O95294 804 aa17.79■□□□□ 0.44
SNX17-206ENST00000484886 ANXA4P09525 319 aaPredicted RBP17.79■□□□□ 0.44
SNX17-206ENST00000484886 SLC35E2P0CK97 266 aa17.79■□□□□ 0.44
SNX17-206ENST00000484886 TIA1P31483 386 aaKnown RBP eCLIP17.79■□□□□ 0.44
SNX17-206ENST00000484886 UQCRFS1P47985 274 aa17.79■□□□□ 0.44
SNX17-206ENST00000484886 HLCSP50747 726 aa17.79■□□□□ 0.44
SNX17-206ENST00000484886 XKP51811 444 aa17.79■□□□□ 0.44
SNX17-206ENST00000484886 TRA2BP62995 288 aaKnown RBP17.79■□□□□ 0.44
SNX17-206ENST00000484886 RNF4P78317 190 aa17.79■□□□□ 0.44
SNX17-206ENST00000484886 ELOAQ14241 798 aaKnown RBP17.79■□□□□ 0.44
SNX17-206ENST00000484886 ZNF468Q5VIY5 522 aaPredicted RBP17.79■□□□□ 0.44
SNX17-206ENST00000484886 C16orf47Q6ZP98 133 aaPredicted RBP17.79■□□□□ 0.44
SNX17-206ENST00000484886 EXOC3L1Q86VI1 746 aa17.79■□□□□ 0.44
SNX17-206ENST00000484886 BCORP1Q8N888 145 aa17.79■□□□□ 0.44
SNX17-206ENST00000484886 TMEM178AQ8NBL3 297 aa17.79■□□□□ 0.44
SNX17-206ENST00000484886 MDS2Q8NDY4 140 aa17.79■□□□□ 0.44
SNX17-206ENST00000484886 OR5L2Q8NGL0 311 aa17.79■□□□□ 0.44
SNX17-206ENST00000484886 ZNF721Q8TF20 911 aa17.79■□□□□ 0.44
SNX17-206ENST00000484886 TMEM125Q96AQ2 219 aa17.79■□□□□ 0.44
SNX17-206ENST00000484886 PKNOX2Q96KN3 472 aa17.79■□□□□ 0.44
SNX17-206ENST00000484886 HES7Q9BYE0 225 aa17.79■□□□□ 0.44
SNX17-206ENST00000484886 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.79■□□□□ 0.44
SNX17-206ENST00000484886 PSME2Q9UL46 239 aa17.79■□□□□ 0.44
SNX17-206ENST00000484886 MYO18BQ8IUG5 2567 aa17.79■□□□□ 0.44
SNX17-206ENST00000484886 A0A1W2PS29 197 aa17.78■□□□□ 0.44
SNX17-206ENST00000484886 SERTM1A2A2V5 107 aa17.78■□□□□ 0.44
SNX17-206ENST00000484886 HRKO00198 91 aa17.78■□□□□ 0.44
SNX17-206ENST00000484886 SLC25A12O75746 678 aa17.78■□□□□ 0.44
SNX17-206ENST00000484886 CHRNGP07510 517 aa17.78■□□□□ 0.44
SNX17-206ENST00000484886 BPGMP07738 259 aa17.78■□□□□ 0.44
SNX17-206ENST00000484886 IL3P08700 152 aa17.78■□□□□ 0.44
SNX17-206ENST00000484886 CPMP14384 443 aa17.78■□□□□ 0.44
SNX17-206ENST00000484886 NT5EP21589 574 aa17.78■□□□□ 0.44
SNX17-206ENST00000484886 RAE1P78406 368 aaKnown RBP17.78■□□□□ 0.44
SNX17-206ENST00000484886 MAPKAPK3Q16644 382 aa17.78■□□□□ 0.44
SNX17-206ENST00000484886 ARL13AQ5H913 290 aaPredicted RBP17.78■□□□□ 0.44
SNX17-206ENST00000484886 SLC48A1Q6P1K1 146 aa17.78■□□□□ 0.44
SNX17-206ENST00000484886 RNF111Q6ZNA4 994 aa17.78■□□□□ 0.44
SNX17-206ENST00000484886 NUDCD3Q8IVD9 361 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms