RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 ZNF763Q0D2J5 394 aa14.81□□□□□ -0.04
UPF3A-208ENST00000484246 CHI3L2Q15782 390 aa14.81□□□□□ -0.04
UPF3A-208ENST00000484246 MEP1AQ16819 746 aa14.81□□□□□ -0.04
UPF3A-208ENST00000484246 XKR7Q5GH72 579 aa14.81□□□□□ -0.04
UPF3A-208ENST00000484246 SH2D4BQ5SQS7 431 aa14.81□□□□□ -0.04
UPF3A-208ENST00000484246 SCIMPQ6UWF3 145 aa14.81□□□□□ -0.04
UPF3A-208ENST00000484246 LINC00696Q6ZRV3 163 aa14.81□□□□□ -0.04
UPF3A-208ENST00000484246 Q6ZSR9 355 aa14.81□□□□□ -0.04
UPF3A-208ENST00000484246 CRLF3Q8IUI8 442 aa14.81□□□□□ -0.04
UPF3A-208ENST00000484246 KIF2BQ8N4N8 673 aa14.81□□□□□ -0.04
UPF3A-208ENST00000484246 AMER2Q8N7J2 671 aa14.81□□□□□ -0.04
UPF3A-208ENST00000484246 OR1N1Q8NGS0 311 aa14.81□□□□□ -0.04
UPF3A-208ENST00000484246 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.81□□□□□ -0.04
UPF3A-208ENST00000484246 TWIST2Q8WVJ9 160 aa14.81□□□□□ -0.04
UPF3A-208ENST00000484246 NCLNQ969V3 563 aa14.81□□□□□ -0.04
UPF3A-208ENST00000484246 ART5Q96L15 291 aa14.81□□□□□ -0.04
UPF3A-208ENST00000484246 EPN3Q9H201 632 aa14.81□□□□□ -0.04
UPF3A-208ENST00000484246 ABI3Q9P2A4 366 aa14.81□□□□□ -0.04
UPF3A-208ENST00000484246 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.81□□□□□ -0.04
UPF3A-208ENST00000484246 PCDHGA10Q9Y5H3 936 aa14.81□□□□□ -0.04
UPF3A-208ENST00000484246 DYTNA2CJ06 578 aa14.8□□□□□ -0.04
UPF3A-208ENST00000484246 GLOD5A6NK44 160 aa14.8□□□□□ -0.04
UPF3A-208ENST00000484246 A8MUA0 341 aa14.8□□□□□ -0.04
UPF3A-208ENST00000484246 TMEM233B4DJY2 109 aa14.8□□□□□ -0.04
UPF3A-208ENST00000484246 DYRK3O43781 588 aa14.8□□□□□ -0.04
UPF3A-208ENST00000484246 MLF1P58340 268 aa14.8□□□□□ -0.04
UPF3A-208ENST00000484246 ABCE1P61221 599 aaKnown RBP14.8□□□□□ -0.04
UPF3A-208ENST00000484246 TLR1Q15399 786 aa14.8□□□□□ -0.04
UPF3A-208ENST00000484246 IKBIPQ70UQ0 350 aa14.8□□□□□ -0.04
UPF3A-208ENST00000484246 RPS19BP1Q86WX3 136 aaKnown RBP14.8□□□□□ -0.04
UPF3A-208ENST00000484246 OR4N5Q8IXE1 308 aa14.8□□□□□ -0.04
UPF3A-208ENST00000484246 OR4K14Q8NGD5 310 aa14.8□□□□□ -0.04
UPF3A-208ENST00000484246 OR2T11Q8NH01 316 aa14.8□□□□□ -0.04
UPF3A-208ENST00000484246 PPP1R14CQ8TAE6 165 aa14.8□□□□□ -0.04
UPF3A-208ENST00000484246 RAB3IL1Q8TBN0 382 aa14.8□□□□□ -0.04
UPF3A-208ENST00000484246 SLC2A12Q8TD20 617 aa14.8□□□□□ -0.04
UPF3A-208ENST00000484246 C16orf78Q8WTQ4 265 aa14.8□□□□□ -0.04
UPF3A-208ENST00000484246 RBM18Q96H35 190 aaKnown RBP14.8□□□□□ -0.04
UPF3A-208ENST00000484246 ZNF764Q96H86 408 aaPredicted RBP14.8□□□□□ -0.04
UPF3A-208ENST00000484246 TRIM45Q9H8W5 580 aaPredicted RBP14.8□□□□□ -0.04
UPF3A-208ENST00000484246 LRTM1Q9HBL6 345 aa14.8□□□□□ -0.04
UPF3A-208ENST00000484246 MYNNQ9NPC7 610 aa14.8□□□□□ -0.04
UPF3A-208ENST00000484246 C1orf109Q9NX04 203 aa14.8□□□□□ -0.04
UPF3A-208ENST00000484246 TMED5Q9Y3A6 229 aa14.8□□□□□ -0.04
UPF3A-208ENST00000484246 PTGDR2Q9Y5Y4 395 aa14.8□□□□□ -0.04
UPF3A-208ENST00000484246 BOD1L1Q8NFC6 3051 aa14.8□□□□□ -0.04
UPF3A-208ENST00000484246 TRAV17A0A0B4J275 112 aa14.79□□□□□ -0.04
UPF3A-208ENST00000484246 TRBV11-1A0A0K0K1C0 115 aa14.79□□□□□ -0.04
UPF3A-208ENST00000484246 GNG14A0A1W2PPG7 69 aa14.79□□□□□ -0.04
UPF3A-208ENST00000484246 OR5H15A6NDH6 313 aa14.79□□□□□ -0.04
UPF3A-208ENST00000484246 WASHC1A8K0Z3 465 aa14.79□□□□□ -0.04
UPF3A-208ENST00000484246 LSM1O15116 133 aaKnown RBP14.79□□□□□ -0.04
UPF3A-208ENST00000484246 SLC28A2O43868 658 aa14.79□□□□□ -0.04
UPF3A-208ENST00000484246 OR10H2O60403 315 aa14.79□□□□□ -0.04
UPF3A-208ENST00000484246 ZFAND5O76080 213 aa14.79□□□□□ -0.04
UPF3A-208ENST00000484246 WDPCPO95876 746 aa14.79□□□□□ -0.04
UPF3A-208ENST00000484246 ATP1B1P05026 303 aa14.79□□□□□ -0.04
UPF3A-208ENST00000484246 ANXA4P09525 319 aaPredicted RBP14.79□□□□□ -0.04
UPF3A-208ENST00000484246 PIK3R1P27986 724 aa14.79□□□□□ -0.04
UPF3A-208ENST00000484246 TRHRP34981 398 aaPredicted RBP14.79□□□□□ -0.04
UPF3A-208ENST00000484246 TNFSF10P50591 281 aa14.79□□□□□ -0.04
UPF3A-208ENST00000484246 HEPACAMQ14CZ8 416 aa14.79□□□□□ -0.04
UPF3A-208ENST00000484246 CEBPEQ15744 281 aa14.79□□□□□ -0.04
UPF3A-208ENST00000484246 INAQ16352 499 aa14.79□□□□□ -0.04
UPF3A-208ENST00000484246 SPDYAQ5MJ70 313 aa14.79□□□□□ -0.04
UPF3A-208ENST00000484246 HHATQ5VTY9 493 aa14.79□□□□□ -0.04
UPF3A-208ENST00000484246 NOXRED1Q6NXP6 359 aa14.79□□□□□ -0.04
UPF3A-208ENST00000484246 RPUSD3Q6P087 351 aaKnown RBP14.79□□□□□ -0.04
UPF3A-208ENST00000484246 ZNF605Q86T29 641 aa14.79□□□□□ -0.04
UPF3A-208ENST00000484246 SAMD14Q8IZD0 417 aaPredicted RBP14.79□□□□□ -0.04
UPF3A-208ENST00000484246 BEST3Q8N1M1 668 aa14.79□□□□□ -0.04
UPF3A-208ENST00000484246 ZNF721Q8TF20 911 aa14.79□□□□□ -0.04
UPF3A-208ENST00000484246 UCN3Q969E3 161 aa14.79□□□□□ -0.04
UPF3A-208ENST00000484246 ARL8AQ96BM9 186 aa14.79□□□□□ -0.04
UPF3A-208ENST00000484246 ATP6V1G3Q96LB4 118 aa14.79□□□□□ -0.04
UPF3A-208ENST00000484246 ZNF681Q96N22 645 aa14.79□□□□□ -0.04
UPF3A-208ENST00000484246 DEFB126Q9BYW3 111 aa14.79□□□□□ -0.04
UPF3A-208ENST00000484246 CXorf21Q9HAI6 301 aa14.79□□□□□ -0.04
UPF3A-208ENST00000484246 NKIRAS1Q9NYS0 192 aa14.79□□□□□ -0.04
UPF3A-208ENST00000484246 STMN3Q9NZ72 180 aa14.79□□□□□ -0.04
UPF3A-208ENST00000484246 ZDHHC2Q9UIJ5 367 aa14.79□□□□□ -0.04
UPF3A-208ENST00000484246 PSME2Q9UL46 239 aa14.79□□□□□ -0.04
UPF3A-208ENST00000484246 DLGAP4Q9Y2H0 992 aa14.79□□□□□ -0.04
UPF3A-208ENST00000484246 RAP2CQ9Y3L5 183 aa14.79□□□□□ -0.04
UPF3A-208ENST00000484246 PCDHGB6Q9Y5F9 930 aa14.79□□□□□ -0.04
UPF3A-208ENST00000484246 CSAG2Q9Y5P2 127 aa14.79□□□□□ -0.04
UPF3A-208ENST00000484246 WDR91A4D1P6 747 aa14.78□□□□□ -0.04
UPF3A-208ENST00000484246 TMEM200CA6NKL6 621 aa14.78□□□□□ -0.04
UPF3A-208ENST00000484246 A8MUI8 341 aa14.78□□□□□ -0.04
UPF3A-208ENST00000484246 PIP5K1BO14986 540 aa14.78□□□□□ -0.04
UPF3A-208ENST00000484246 ITM2AO43736 263 aa14.78□□□□□ -0.04
UPF3A-208ENST00000484246 HSPA4LO95757 839 aa14.78□□□□□ -0.04
UPF3A-208ENST00000484246 UQCRHP07919 91 aa14.78□□□□□ -0.04
UPF3A-208ENST00000484246 IL3P08700 152 aa14.78□□□□□ -0.04
UPF3A-208ENST00000484246 CPMP14384 443 aa14.78□□□□□ -0.04
UPF3A-208ENST00000484246 PLA2G2AP14555 144 aa14.78□□□□□ -0.04
UPF3A-208ENST00000484246 CSNK2A2P19784 350 aaPredicted RBP14.78□□□□□ -0.04
UPF3A-208ENST00000484246 DDCP20711 480 aa14.78□□□□□ -0.04
UPF3A-208ENST00000484246 BGNP21810 368 aa14.78□□□□□ -0.04
UPF3A-208ENST00000484246 ARG2P78540 354 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms