RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 C9P02748 559 aa13.24□□□□□ -0.29
CLK3-204ENST00000483723 TFPTP0C1Z6 253 aa13.24□□□□□ -0.29
CLK3-204ENST00000483723 TLX1P31314 330 aaPredicted RBP13.24□□□□□ -0.29
CLK3-204ENST00000483723 ARRB1P49407 418 aaPredicted RBP13.24□□□□□ -0.29
CLK3-204ENST00000483723 SELENOWP63302 87 aa13.24□□□□□ -0.29
CLK3-204ENST00000483723 MED21Q13503 144 aa13.24□□□□□ -0.29
CLK3-204ENST00000483723 NRF1Q16656 503 aa13.24□□□□□ -0.29
CLK3-204ENST00000483723 ZNF750Q32MQ0 723 aa13.24□□□□□ -0.29
CLK3-204ENST00000483723 CYBRD1Q53TN4 286 aa13.24□□□□□ -0.29
CLK3-204ENST00000483723 CEACAM20Q6UY09 585 aa13.24□□□□□ -0.29
CLK3-204ENST00000483723 FAM92BQ6ZTR7 304 aa13.24□□□□□ -0.29
CLK3-204ENST00000483723 PRSS41Q7RTY9 318 aa13.24□□□□□ -0.29
CLK3-204ENST00000483723 GALNT10Q86SR1 603 aa13.24□□□□□ -0.29
CLK3-204ENST00000483723 CA13Q8N1Q1 262 aa13.24□□□□□ -0.29
CLK3-204ENST00000483723 MARVELD2Q8N4S9 558 aa13.24□□□□□ -0.29
CLK3-204ENST00000483723 METTL25Q8N6Q8 603 aa13.24□□□□□ -0.29
CLK3-204ENST00000483723 NFKBIDQ8NI38 313 aa13.24□□□□□ -0.29
CLK3-204ENST00000483723 MIPOL1Q8TD10 442 aa13.24□□□□□ -0.29
CLK3-204ENST00000483723 ZDHHC12Q96GR4 267 aa13.24□□□□□ -0.29
CLK3-204ENST00000483723 NECAB3Q96P71 396 aaPredicted RBP13.24□□□□□ -0.29
CLK3-204ENST00000483723 CCDC3Q9BQI4 270 aa13.24□□□□□ -0.29
CLK3-204ENST00000483723 DOHHQ9BU89 302 aa13.24□□□□□ -0.29
CLK3-204ENST00000483723 SERHL2Q9H4I8 314 aa13.24□□□□□ -0.29
CLK3-204ENST00000483723 THUMPD1Q9NXG2 353 aaKnown RBP13.24□□□□□ -0.29
CLK3-204ENST00000483723 PLCL2Q9UPR0 1127 aa13.24□□□□□ -0.29
CLK3-204ENST00000483723 AK5Q9Y6K8 562 aa13.24□□□□□ -0.29
CLK3-204ENST00000483723 ZNF780BQ9Y6R6 833 aa13.24□□□□□ -0.29
CLK3-204ENST00000483723 TECTAO75443 2155 aa13.24□□□□□ -0.29
CLK3-204ENST00000483723 IGHV5-51A0A0C4DH38 117 aa13.23□□□□□ -0.29
CLK3-204ENST00000483723 A0A1W2PS29 197 aa13.23□□□□□ -0.29
CLK3-204ENST00000483723 PDLIM1O00151 329 aa13.23□□□□□ -0.29
CLK3-204ENST00000483723 ZNF682O95780 498 aa13.23□□□□□ -0.29
CLK3-204ENST00000483723 CST1P01037 141 aa13.23□□□□□ -0.29
CLK3-204ENST00000483723 CTSBP07858 339 aa13.23□□□□□ -0.29
CLK3-204ENST00000483723 GPC1P35052 558 aa13.23□□□□□ -0.29
CLK3-204ENST00000483723 FEN1P39748 380 aaKnown RBP13.23□□□□□ -0.29
CLK3-204ENST00000483723 GFERP55789 205 aa13.23□□□□□ -0.29
CLK3-204ENST00000483723 KCNJ10P78508 379 aa13.23□□□□□ -0.29
CLK3-204ENST00000483723 SPIDRQ14159 915 aa13.23□□□□□ -0.29
CLK3-204ENST00000483723 MAPK11Q15759 364 aa13.23□□□□□ -0.29
CLK3-204ENST00000483723 SPDYE7PQ495Y7 208 aa13.23□□□□□ -0.29
CLK3-204ENST00000483723 NHSL2Q5HYW2 709 aa13.23□□□□□ -0.29
CLK3-204ENST00000483723 ZDHHC21Q8IVQ6 265 aa13.23□□□□□ -0.29
CLK3-204ENST00000483723 ZC3H7AQ8IWR0 971 aaKnown RBP13.23□□□□□ -0.29
CLK3-204ENST00000483723 OR4K14Q8NGD5 310 aa13.23□□□□□ -0.29
CLK3-204ENST00000483723 TMBIM1Q969X1 311 aa13.23□□□□□ -0.29
CLK3-204ENST00000483723 ELP4Q96EB1 424 aa13.23□□□□□ -0.29
CLK3-204ENST00000483723 C7orf34Q96L11 122 aa13.23□□□□□ -0.29
CLK3-204ENST00000483723 CSF3RQ99062 836 aa13.23□□□□□ -0.29
CLK3-204ENST00000483723 OSBPL11Q9BXB4 747 aa13.23□□□□□ -0.29
CLK3-204ENST00000483723 ADPRHL2Q9NX46 363 aa13.23□□□□□ -0.29
CLK3-204ENST00000483723 FBXO4Q9UKT5 387 aa13.23□□□□□ -0.29
CLK3-204ENST00000483723 NAALAD2Q9Y3Q0 740 aa13.23□□□□□ -0.29
CLK3-204ENST00000483723 ZNF451Q9Y4E5 1061 aa13.23□□□□□ -0.29
CLK3-204ENST00000483723 AP4B1Q9Y6B7 739 aa13.23□□□□□ -0.29
CLK3-204ENST00000483723 M0QX08 132 aa13.22□□□□□ -0.29
CLK3-204ENST00000483723 HMGN4O00479 90 aa13.22□□□□□ -0.29
CLK3-204ENST00000483723 EMC8O43402 210 aa13.22□□□□□ -0.29
CLK3-204ENST00000483723 SUV39H1O43463 412 aa13.22□□□□□ -0.29
CLK3-204ENST00000483723 C8orf89P0DMQ9 161 aa13.22□□□□□ -0.29
CLK3-204ENST00000483723 EPHA8P29322 1005 aaPredicted RBP13.22□□□□□ -0.29
CLK3-204ENST00000483723 OR1D5P58170 312 aa13.22□□□□□ -0.29
CLK3-204ENST00000483723 TXNL4AP83876 142 aaKnown RBP13.22□□□□□ -0.29
CLK3-204ENST00000483723 CFHR1Q03591 330 aa13.22□□□□□ -0.29
CLK3-204ENST00000483723 FAM53BQ14153 422 aa13.22□□□□□ -0.29
CLK3-204ENST00000483723 DEFB110Q30KQ9 67 aa13.22□□□□□ -0.29
CLK3-204ENST00000483723 INAVAQ3KP66 663 aa13.22□□□□□ -0.29
CLK3-204ENST00000483723 REEP3Q6NUK4 255 aa13.22□□□□□ -0.29
CLK3-204ENST00000483723 BHLHB9Q6PI77 547 aa13.22□□□□□ -0.29
CLK3-204ENST00000483723 TBPL2Q6SJ96 375 aa13.22□□□□□ -0.29
CLK3-204ENST00000483723 VTCN1Q7Z7D3 282 aa13.22□□□□□ -0.29
CLK3-204ENST00000483723 OR10Q1Q8NGQ4 319 aa13.22□□□□□ -0.29
CLK3-204ENST00000483723 SLC38A5Q8WUX1 472 aa13.22□□□□□ -0.29
CLK3-204ENST00000483723 NCSTNQ92542 709 aa13.22□□□□□ -0.29
CLK3-204ENST00000483723 TAMM41Q96BW9 452 aa13.22□□□□□ -0.29
CLK3-204ENST00000483723 VPS50Q96JG6 964 aa13.22□□□□□ -0.29
CLK3-204ENST00000483723 HSH2DQ96JZ2 352 aa13.22□□□□□ -0.29
CLK3-204ENST00000483723 SLC35G5Q96KT7 338 aa13.22□□□□□ -0.29
CLK3-204ENST00000483723 TGM7Q96PF1 710 aa13.22□□□□□ -0.29
CLK3-204ENST00000483723 Q9H521 79 aa13.22□□□□□ -0.29
CLK3-204ENST00000483723 CLK4Q9HAZ1 481 aaKnown RBP13.22□□□□□ -0.29
CLK3-204ENST00000483723 STARD5Q9NSY2 213 aa13.22□□□□□ -0.29
CLK3-204ENST00000483723 ZCCHC3Q9NUD5 404 aaKnown RBP13.22□□□□□ -0.29
CLK3-204ENST00000483723 NLGN3Q9NZ94 848 aa13.22□□□□□ -0.29
CLK3-204ENST00000483723 ANGPT4Q9Y264 503 aa13.22□□□□□ -0.29
CLK3-204ENST00000483723 SPACA6W5XKT8 324 aa13.22□□□□□ -0.29
CLK3-204ENST00000483723 TTC28Q96AY4 2481 aa13.22□□□□□ -0.29
CLK3-204ENST00000483723 FITM1A5D6W6 292 aa13.22□□□□□ -0.29
CLK3-204ENST00000483723 PLOD2O00469 737 aa13.22□□□□□ -0.29
CLK3-204ENST00000483723 FOXS1O43638 330 aa13.22□□□□□ -0.29
CLK3-204ENST00000483723 ZBTB11O95625 1053 aaPredicted RBP13.22□□□□□ -0.29
CLK3-204ENST00000483723 FHP07954 510 aa13.22□□□□□ -0.29
CLK3-204ENST00000483723 IFI6P09912 130 aa13.22□□□□□ -0.29
CLK3-204ENST00000483723 MATN1P21941 496 aa13.22□□□□□ -0.29
CLK3-204ENST00000483723 ALDH4A1P30038 563 aa13.22□□□□□ -0.29
CLK3-204ENST00000483723 CLCN2P51788 898 aa13.22□□□□□ -0.29
CLK3-204ENST00000483723 XKP51811 444 aa13.22□□□□□ -0.29
CLK3-204ENST00000483723 EMP3P54852 163 aa13.22□□□□□ -0.29
CLK3-204ENST00000483723 RAB38P57729 211 aa13.22□□□□□ -0.29
CLK3-204ENST00000483723 RPS26P62854 115 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms