RNA–Protein interactions for RNA: ENST00000480828.5

UBE2F-221, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 802 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-221ENST00000480828 H3BMH7 237 aa3.19□□□□□ -1.9
UBE2F-221ENST00000480828 ANXA9O76027 345 aa3.19□□□□□ -1.9
UBE2F-221ENST00000480828 KIAA0754O94854 1291 aa3.19□□□□□ -1.9
UBE2F-221ENST00000480828 UFL1O94874 794 aa3.19□□□□□ -1.9
UBE2F-221ENST00000480828 MFN2O95140 757 aa3.19□□□□□ -1.9
UBE2F-221ENST00000480828 PLA2G2AP14555 144 aa3.19□□□□□ -1.9
UBE2F-221ENST00000480828 RPL35AP18077 110 aaKnown RBP3.19□□□□□ -1.9
UBE2F-221ENST00000480828 AADACP22760 399 aa3.19□□□□□ -1.9
UBE2F-221ENST00000480828 MARK3P27448 753 aa3.19□□□□□ -1.9
UBE2F-221ENST00000480828 DPP4P27487 766 aa3.19□□□□□ -1.9
UBE2F-221ENST00000480828 PTPN6P29350 595 aa3.19□□□□□ -1.9
UBE2F-221ENST00000480828 OTX2P32243 289 aa3.19□□□□□ -1.9
UBE2F-221ENST00000480828 DCTP40126 519 aa3.19□□□□□ -1.9
UBE2F-221ENST00000480828 ALDH3B1P43353 468 aa3.19□□□□□ -1.9
UBE2F-221ENST00000480828 OR3A2P47893 321 aa3.19□□□□□ -1.9
UBE2F-221ENST00000480828 LINC00205P59089 165 aa3.19□□□□□ -1.9
UBE2F-221ENST00000480828 RPS4XP62701 263 aaKnown RBP3.19□□□□□ -1.9
UBE2F-221ENST00000480828 NAAAQ02083 359 aa3.19□□□□□ -1.9
UBE2F-221ENST00000480828 SRSF9Q13242 221 aaKnown RBP eCLIP3.19□□□□□ -1.9
UBE2F-221ENST00000480828 EXOSC2Q13868 293 aaKnown RBP3.19□□□□□ -1.9
UBE2F-221ENST00000480828 KLF5Q13887 457 aaPredicted RBP3.19□□□□□ -1.9
UBE2F-221ENST00000480828 LRIT3Q3SXY7 679 aa3.19□□□□□ -1.9
UBE2F-221ENST00000480828 KCTD21Q4G0X4 260 aa3.19□□□□□ -1.9
UBE2F-221ENST00000480828 ATP1A1-AS1Q5TC04 95 aa3.19□□□□□ -1.9
UBE2F-221ENST00000480828 C9orf57Q5W0N0 161 aa3.19□□□□□ -1.9
UBE2F-221ENST00000480828 NIPAL3Q6P499 406 aa3.19□□□□□ -1.9
UBE2F-221ENST00000480828 SLC39A4Q6P5W5 647 aa3.19□□□□□ -1.9
UBE2F-221ENST00000480828 CBLN3Q6UW01 205 aa3.19□□□□□ -1.9
UBE2F-221ENST00000480828 ZYG11AQ6WRX3 759 aa3.19□□□□□ -1.9
UBE2F-221ENST00000480828 Q6ZRG5 221 aa3.19□□□□□ -1.9
UBE2F-221ENST00000480828 SPATA2LQ8IUW3 424 aaPredicted RBP3.19□□□□□ -1.9
UBE2F-221ENST00000480828 CDH26Q8IXH8 852 aa3.19□□□□□ -1.9
UBE2F-221ENST00000480828 DMBX1Q8NFW5 382 aa3.19□□□□□ -1.9
UBE2F-221ENST00000480828 GIPC3Q8TF64 312 aa3.19□□□□□ -1.9
UBE2F-221ENST00000480828 SUSD6Q92537 303 aa3.19□□□□□ -1.9
UBE2F-221ENST00000480828 CASP10Q92851 521 aa3.19□□□□□ -1.9
UBE2F-221ENST00000480828 ZBTB9Q96C00 473 aa3.19□□□□□ -1.9
UBE2F-221ENST00000480828 TCEANC2Q96MN5 208 aa3.19□□□□□ -1.9
UBE2F-221ENST00000480828 INPP4AQ96PE3 977 aaPredicted RBP3.19□□□□□ -1.9
UBE2F-221ENST00000480828 VPS35Q96QK1 796 aa3.19□□□□□ -1.9
UBE2F-221ENST00000480828 ALG12Q9BV10 488 aa3.19□□□□□ -1.9
UBE2F-221ENST00000480828 TRIM6Q9C030 488 aaPredicted RBP3.19□□□□□ -1.9
UBE2F-221ENST00000480828 ATP13A3Q9H7F0 1226 aa3.19□□□□□ -1.9
UBE2F-221ENST00000480828 KAT8Q9H7Z6 458 aaKnown RBP3.19□□□□□ -1.9
UBE2F-221ENST00000480828 SLC25A19Q9HC21 320 aa3.19□□□□□ -1.9
UBE2F-221ENST00000480828 MED17Q9NVC6 651 aa3.19□□□□□ -1.9
UBE2F-221ENST00000480828 RAI14Q9P0K7 980 aa3.19□□□□□ -1.9
UBE2F-221ENST00000480828 CTNNA3Q9UI47 895 aa3.19□□□□□ -1.9
UBE2F-221ENST00000480828 ZNF490Q9ULM2 529 aaPredicted RBP3.19□□□□□ -1.9
UBE2F-221ENST00000480828 CLEC4AQ9UMR7 237 aa3.19□□□□□ -1.9
UBE2F-221ENST00000480828 SLC6A5Q9Y345 797 aa3.19□□□□□ -1.9
UBE2F-221ENST00000480828 PARD3Q8TEW0 1356 aa3.19□□□□□ -1.9
UBE2F-221ENST00000480828 CACNA1IQ9P0X4 2223 aa3.19□□□□□ -1.9
UBE2F-221ENST00000480828 CKAP5Q14008 2032 aa3.19□□□□□ -1.9
UBE2F-221ENST00000480828 GSAPA4D1B5 854 aa3.18□□□□□ -1.9
UBE2F-221ENST00000480828 DCXO43602 365 aa3.18□□□□□ -1.9
UBE2F-221ENST00000480828 NUDT21O43809 227 aaKnown RBP3.18□□□□□ -1.9
UBE2F-221ENST00000480828 KLHL41O60662 606 aa3.18□□□□□ -1.9
UBE2F-221ENST00000480828 TSC22D2O75157 780 aa3.18□□□□□ -1.9
UBE2F-221ENST00000480828 SURF6O75683 361 aaKnown RBP3.18□□□□□ -1.9
UBE2F-221ENST00000480828 KRT33AO76009 404 aa3.18□□□□□ -1.9
UBE2F-221ENST00000480828 NEBLO76041 1014 aa3.18□□□□□ -1.9
UBE2F-221ENST00000480828 SEC24AO95486 1093 aa3.18□□□□□ -1.9
UBE2F-221ENST00000480828 ADCY5O95622 1261 aa3.18□□□□□ -1.9
UBE2F-221ENST00000480828 IL1BP01584 269 aa3.18□□□□□ -1.9
UBE2F-221ENST00000480828 VTNP04004 478 aa3.18□□□□□ -1.9
UBE2F-221ENST00000480828 NGFRP08138 427 aa3.18□□□□□ -1.9
UBE2F-221ENST00000480828 F7P08709 466 aaPredicted RBP3.18□□□□□ -1.9
UBE2F-221ENST00000480828 ANXA4P09525 319 aaPredicted RBP3.18□□□□□ -1.9
UBE2F-221ENST00000480828 FAM157CP0CG43 387 aa3.18□□□□□ -1.9
UBE2F-221ENST00000480828 SLC2A2P11168 524 aaPredicted RBP3.18□□□□□ -1.9
UBE2F-221ENST00000480828 GP9P14770 177 aa3.18□□□□□ -1.9
UBE2F-221ENST00000480828 CYLC1P35663 651 aaPredicted RBP3.18□□□□□ -1.9
UBE2F-221ENST00000480828 TRIM23P36406 574 aa3.18□□□□□ -1.9
UBE2F-221ENST00000480828 FEN1P39748 380 aaKnown RBP3.18□□□□□ -1.9
UBE2F-221ENST00000480828 SOX3P41225 446 aa3.18□□□□□ -1.9
UBE2F-221ENST00000480828 MTIF2P46199 727 aaKnown RBP3.18□□□□□ -1.9
UBE2F-221ENST00000480828 RGS4P49798 205 aa3.18□□□□□ -1.9
UBE2F-221ENST00000480828 XGP55808 180 aa3.18□□□□□ -1.9
UBE2F-221ENST00000480828 TNFRSF17Q02223 184 aa3.18□□□□□ -1.9
UBE2F-221ENST00000480828 DRP2Q13474 957 aa3.18□□□□□ -1.9
UBE2F-221ENST00000480828 ZMYND11Q15326 602 aa3.18□□□□□ -1.9
UBE2F-221ENST00000480828 P2RY14Q15391 338 aa3.18□□□□□ -1.9
UBE2F-221ENST00000480828 CAMK4Q16566 473 aa3.18□□□□□ -1.9
UBE2F-221ENST00000480828 TPD52L1Q16890 204 aaPredicted RBP3.18□□□□□ -1.9
UBE2F-221ENST00000480828 ZNF699Q32M78 642 aa3.18□□□□□ -1.9
UBE2F-221ENST00000480828 FAM106AQ4KMX7 169 aa3.18□□□□□ -1.9
UBE2F-221ENST00000480828 TCHHL1Q5QJ38 904 aaPredicted RBP3.18□□□□□ -1.9
UBE2F-221ENST00000480828 SPATA46Q5T0L3 261 aa3.18□□□□□ -1.9
UBE2F-221ENST00000480828 ARHGAP17Q68EM7 881 aa3.18□□□□□ -1.9
UBE2F-221ENST00000480828 SLC25A47Q6Q0C1 308 aa3.18□□□□□ -1.9
UBE2F-221ENST00000480828 PRSS57Q6UWY2 283 aa3.18□□□□□ -1.9
UBE2F-221ENST00000480828 RBMS3Q6XE24 437 aaKnown RBP3.18□□□□□ -1.9
UBE2F-221ENST00000480828 ZNF730Q6ZMV8 503 aa3.18□□□□□ -1.9
UBE2F-221ENST00000480828 C9orf47Q6ZRZ4 202 aa3.18□□□□□ -1.9
UBE2F-221ENST00000480828 FOXL2NBQ6ZUU3 175 aa3.18□□□□□ -1.9
UBE2F-221ENST00000480828 Q6ZVQ6 151 aa3.18□□□□□ -1.9
UBE2F-221ENST00000480828 GOLGA7Q7Z5G4 137 aa3.18□□□□□ -1.9
UBE2F-221ENST00000480828 CBWD2Q8IUF1 395 aa3.18□□□□□ -1.9
UBE2F-221ENST00000480828 ARFGAP2Q8N6H7 521 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms