RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-223ENST00000479656 RIPK1Q13546 671 aa10.55□□□□□ -0.72
APTX-223ENST00000479656 C16orf72Q14CZ0 275 aa10.55□□□□□ -0.72
APTX-223ENST00000479656 ANGPTL8Q6UXH0 198 aa10.55□□□□□ -0.72
APTX-223ENST00000479656 DHFR2Q86XF0 187 aa10.55□□□□□ -0.72
APTX-223ENST00000479656 CALHM3Q86XJ0 350 aa10.55□□□□□ -0.72
APTX-223ENST00000479656 OR2T12Q8NG77 320 aa10.55□□□□□ -0.72
APTX-223ENST00000479656 OR51Q1Q8NH59 317 aa10.55□□□□□ -0.72
APTX-223ENST00000479656 SLC26A7Q8TE54 656 aa10.55□□□□□ -0.72
APTX-223ENST00000479656 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.55□□□□□ -0.72
APTX-223ENST00000479656 TANKQ92844 425 aa10.55□□□□□ -0.72
APTX-223ENST00000479656 COL26A1Q96A83 441 aa10.55□□□□□ -0.72
APTX-223ENST00000479656 MAGED4Q96JG8 741 aa10.55□□□□□ -0.72
APTX-223ENST00000479656 YIPF2Q9BWQ6 316 aa10.55□□□□□ -0.72
APTX-223ENST00000479656 GPATCH2Q9NW75 528 aa10.55□□□□□ -0.72
APTX-223ENST00000479656 AP3M1Q9Y2T2 418 aa10.55□□□□□ -0.72
APTX-223ENST00000479656 HCN4Q9Y3Q4 1203 aa10.55□□□□□ -0.72
APTX-223ENST00000479656 B4GALT2O60909 372 aa10.55□□□□□ -0.72
APTX-223ENST00000479656 KRT36O76013 467 aa10.55□□□□□ -0.72
APTX-223ENST00000479656 TIAF1O95411 115 aa10.55□□□□□ -0.72
APTX-223ENST00000479656 PPIBP23284 216 aaKnown RBP10.55□□□□□ -0.72
APTX-223ENST00000479656 CSTF2P33240 577 aaKnown RBP eCLIP10.55□□□□□ -0.72
APTX-223ENST00000479656 NBL1P41271 181 aa10.55□□□□□ -0.72
APTX-223ENST00000479656 CCT3P49368 545 aaKnown RBP10.55□□□□□ -0.72
APTX-223ENST00000479656 MVDP53602 400 aa10.55□□□□□ -0.72
APTX-223ENST00000479656 ABHD18Q0P651 414 aa10.55□□□□□ -0.72
APTX-223ENST00000479656 TRA2AQ13595 282 aaKnown RBP eCLIP10.55□□□□□ -0.72
APTX-223ENST00000479656 RGNQ15493 299 aa10.55□□□□□ -0.72
APTX-223ENST00000479656 SPDYE7PQ495Y7 208 aa10.55□□□□□ -0.72
APTX-223ENST00000479656 COX20Q5RI15 118 aa10.55□□□□□ -0.72
APTX-223ENST00000479656 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.55□□□□□ -0.72
APTX-223ENST00000479656 C1orf189Q5VU69 101 aa10.55□□□□□ -0.72
APTX-223ENST00000479656 GLYATQ6IB77 296 aa10.55□□□□□ -0.72
APTX-223ENST00000479656 GPR155Q7Z3F1 870 aa10.55□□□□□ -0.72
APTX-223ENST00000479656 PTRH1Q86Y79 214 aaKnown RBP10.55□□□□□ -0.72
APTX-223ENST00000479656 SPPL2CQ8IUH8 684 aa10.55□□□□□ -0.72
APTX-223ENST00000479656 ADCY4Q8NFM4 1077 aa10.55□□□□□ -0.72
APTX-223ENST00000479656 ZFP28Q8NHY6 868 aa10.55□□□□□ -0.72
APTX-223ENST00000479656 PSMA8Q8TAA3 256 aa10.55□□□□□ -0.72
APTX-223ENST00000479656 ANKRD9Q96BM1 317 aaPredicted RBP10.55□□□□□ -0.72
APTX-223ENST00000479656 EPS8L2Q9H6S3 715 aa10.55□□□□□ -0.72
APTX-223ENST00000479656 CLK4Q9HAZ1 481 aaKnown RBP10.55□□□□□ -0.72
APTX-223ENST00000479656 NEUROD4Q9HD90 331 aa10.55□□□□□ -0.72
APTX-223ENST00000479656 APMAPQ9HDC9 416 aa10.55□□□□□ -0.72
APTX-223ENST00000479656 PRDM9Q9NQV7 894 aa10.55□□□□□ -0.72
APTX-223ENST00000479656 ACTR3BQ9P1U1 418 aa10.55□□□□□ -0.72
APTX-223ENST00000479656 RARRES3Q9UL19 164 aa10.55□□□□□ -0.72
APTX-223ENST00000479656 MAP4K5Q9Y4K4 846 aa10.55□□□□□ -0.72
APTX-223ENST00000479656 PCDHB3Q9Y5E6 796 aa10.55□□□□□ -0.72
APTX-223ENST00000479656 GMEB1Q9Y692 573 aa10.55□□□□□ -0.72
APTX-223ENST00000479656 COL5A1P20908 1838 aaPredicted RBP10.55□□□□□ -0.72
APTX-223ENST00000479656 SCN2AQ99250 2005 aa10.54□□□□□ -0.72
APTX-223ENST00000479656 RNF103-CHMP3A0A140T963 221 aa10.54□□□□□ -0.72
APTX-223ENST00000479656 ELOVL7A1L3X0 281 aa10.54□□□□□ -0.72
APTX-223ENST00000479656 OR2W5A6NFC9 320 aa10.54□□□□□ -0.72
APTX-223ENST00000479656 EFCAB7A8K855 629 aa10.54□□□□□ -0.72
APTX-223ENST00000479656 H0Y3Z8 333 aa10.54□□□□□ -0.72
APTX-223ENST00000479656 DSCR3O14972 297 aa10.54□□□□□ -0.72
APTX-223ENST00000479656 ARPC2O15144 300 aa10.54□□□□□ -0.72
APTX-223ENST00000479656 LRP3O75074 770 aa10.54□□□□□ -0.72
APTX-223ENST00000479656 CDC123O75794 336 aaPredicted RBP10.54□□□□□ -0.72
APTX-223ENST00000479656 KCNK5O95279 499 aa10.54□□□□□ -0.72
APTX-223ENST00000479656 PSMG1O95456 288 aa10.54□□□□□ -0.72
APTX-223ENST00000479656 STAMBPO95630 424 aa10.54□□□□□ -0.72
APTX-223ENST00000479656 GPR75O95800 540 aa10.54□□□□□ -0.72
APTX-223ENST00000479656 CPMP14384 443 aa10.54□□□□□ -0.72
APTX-223ENST00000479656 PORP16435 677 aaPredicted RBP10.54□□□□□ -0.72
APTX-223ENST00000479656 CRATP43155 626 aa10.54□□□□□ -0.72
APTX-223ENST00000479656 PDX1P52945 283 aa10.54□□□□□ -0.72
APTX-223ENST00000479656 LTB4RQ15722 352 aa10.54□□□□□ -0.72
APTX-223ENST00000479656 C6orf120Q7Z4R8 191 aa10.54□□□□□ -0.72
APTX-223ENST00000479656 SERPINA11Q86U17 422 aa10.54□□□□□ -0.72
APTX-223ENST00000479656 SPATA24Q86W54 205 aa10.54□□□□□ -0.72
APTX-223ENST00000479656 RNF130Q86XS8 419 aa10.54□□□□□ -0.72
APTX-223ENST00000479656 LRRC25Q8N386 305 aaPredicted RBP10.54□□□□□ -0.72
APTX-223ENST00000479656 OR52N2Q8NGI0 321 aa10.54□□□□□ -0.72
APTX-223ENST00000479656 OR9A2Q8NGT5 310 aa10.54□□□□□ -0.72
APTX-223ENST00000479656 DOK4Q8TEW6 326 aa10.54□□□□□ -0.72
APTX-223ENST00000479656 STMN2Q93045 179 aa10.54□□□□□ -0.72
APTX-223ENST00000479656 MVB12AQ96EY5 273 aa10.54□□□□□ -0.72
APTX-223ENST00000479656 LRGUKQ96M69 825 aa10.54□□□□□ -0.72
APTX-223ENST00000479656 SLC7A5P2Q9GIP4 190 aa10.54□□□□□ -0.72
APTX-223ENST00000479656 ZNF304Q9HCX3 659 aa10.54□□□□□ -0.72
APTX-223ENST00000479656 SIDT1Q9NXL6 827 aaKnown RBP10.54□□□□□ -0.72
APTX-223ENST00000479656 BCAP29Q9UHQ4 241 aa10.54□□□□□ -0.72
APTX-223ENST00000479656 CDC14AQ9UNH5 594 aa10.54□□□□□ -0.72
APTX-223ENST00000479656 ADAMTS20P59510 1910 aa10.54□□□□□ -0.72
APTX-223ENST00000479656 FAM220BPB1ANY3 271 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 GSTA4O15217 222 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 JRKO75564 520 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 KRT75O95678 551 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 NUDT7P0C024 238 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 ETFAP13804 333 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 ATP6V1B2P21281 511 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 XCR1P46094 333 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 PRKAG1P54619 331 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 BTG2P78543 158 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 FXNQ16595 210 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 CYP51A1Q16850 503 aa10.53□□□□□ -0.72
APTX-223ENST00000479656 YOD1Q5VVQ6 348 aaPredicted RBP10.53□□□□□ -0.72
APTX-223ENST00000479656 SAXO2Q658L1 398 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms