RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 ZNF789Q5FWF6 425 aa3.24□□□□□ -1.89
SMARCA1-204ENST00000478420 LCE1FQ5T754 118 aa3.24□□□□□ -1.89
SMARCA1-204ENST00000478420 PM20D1Q6GTS8 502 aa3.24□□□□□ -1.89
SMARCA1-204ENST00000478420 C17orf107Q6ZR85 190 aa3.24□□□□□ -1.89
SMARCA1-204ENST00000478420 Q6ZVQ6 151 aa3.24□□□□□ -1.89
SMARCA1-204ENST00000478420 RUFY3Q7L099 469 aa3.24□□□□□ -1.89
SMARCA1-204ENST00000478420 ZNF410Q86VK4 478 aa3.24□□□□□ -1.89
SMARCA1-204ENST00000478420 AMZ2Q86W34 360 aa3.24□□□□□ -1.89
SMARCA1-204ENST00000478420 FAM131BQ86XD5 332 aa3.24□□□□□ -1.89
SMARCA1-204ENST00000478420 CCDC83Q8IWF9 413 aa3.24□□□□□ -1.89
SMARCA1-204ENST00000478420 DND1Q8IYX4 353 aaKnown RBP3.24□□□□□ -1.89
SMARCA1-204ENST00000478420 TDHQ8IZJ6 230 aa3.24□□□□□ -1.89
SMARCA1-204ENST00000478420 TAF15Q92804 592 aaKnown RBP eCLIP3.24□□□□□ -1.89
SMARCA1-204ENST00000478420 ZNF560Q96MR9 790 aa3.24□□□□□ -1.89
SMARCA1-204ENST00000478420 CARD6Q9BX69 1037 aa3.24□□□□□ -1.89
SMARCA1-204ENST00000478420 SRD5A3Q9H8P0 318 aa3.24□□□□□ -1.89
SMARCA1-204ENST00000478420 PALMDQ9NP74 551 aa3.24□□□□□ -1.89
SMARCA1-204ENST00000478420 GPR173Q9NS66 373 aa3.24□□□□□ -1.89
SMARCA1-204ENST00000478420 CENPMQ9NSP4 180 aa3.24□□□□□ -1.89
SMARCA1-204ENST00000478420 FAM212BQ9NTI7 297 aaPredicted RBP3.24□□□□□ -1.89
SMARCA1-204ENST00000478420 NMRK1Q9NWW6 199 aa3.24□□□□□ -1.89
SMARCA1-204ENST00000478420 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.24□□□□□ -1.895e-11■■■□□ 15.5
SMARCA1-204ENST00000478420 ANKMY1Q9P2S6 941 aa3.24□□□□□ -1.89
SMARCA1-204ENST00000478420 KLK13Q9UKR3 277 aa3.24□□□□□ -1.89
SMARCA1-204ENST00000478420 CCPG1Q9ULG6 757 aa3.24□□□□□ -1.89
SMARCA1-204ENST00000478420 NUDCQ9Y266 331 aa3.24□□□□□ -1.89
SMARCA1-204ENST00000478420 CAB39Q9Y376 341 aaPredicted RBP3.24□□□□□ -1.89
SMARCA1-204ENST00000478420 IGHV3-20A0A0C4DH32 117 aa3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 A0A1B0GWJ7 208 aa3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 ANKDD1BA6NHY2 528 aa3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 ZNF732B4DXR9 585 aa3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 MAGEB3O15480 346 aa3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 TTI1O43156 1089 aa3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 GPRIN2O60269 458 aa3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 POP4O95707 220 aaKnown RBP3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 CXCL14O95715 111 aa3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 GH1P01241 217 aa3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 ACP1P24666 158 aa3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 DNAJB1P25685 340 aa3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 CCND2P30279 289 aa3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 SERPINB6P35237 376 aa3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 FRKP42685 505 aaPredicted RBP3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 MTIF2P46199 727 aaKnown RBP3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 TAF6P49848 677 aa3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 METAP1P53582 386 aa3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 PAX8Q06710 450 aa3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 CNTN1Q12860 1018 aa3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 GPM6BQ13491 265 aa3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 GCKRQ14397 625 aa3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 SLC1A5Q15758 541 aa3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 UPP1Q16831 310 aa3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 EPC2Q52LR7 807 aa3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 HERC4Q5GLZ8 1057 aaPredicted RBP3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 RIPPLY2Q5TAB7 128 aa3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 PRAMEF8Q5VWM4 474 aa3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 OR6B2Q6IFH4 312 aa3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 ZNF343Q6P1L6 599 aa3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 PODNL1Q6PEZ8 512 aa3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 AFTPHQ6ULP2 937 aa3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 CDHR3Q6ZTQ4 885 aa3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 GPRIN3Q6ZVF9 776 aa3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 TOM1L2Q6ZVM7 507 aa3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 RFPL4BQ6ZWI9 263 aa3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 Q71RC1 249 aaPredicted RBP3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 CDH26Q8IXH8 852 aa3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 SMYD1Q8NB12 490 aa3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 CLEC1AQ8NC01 280 aa3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 RNF149Q8NC42 400 aa3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 CCNYQ8ND76 341 aa3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 OR6C4Q8NGE1 309 aa3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 EXOC6Q8TAG9 804 aa3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 NPRL2Q8WTW4 380 aa3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 FAM222BQ8WU58 562 aa3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 CHPT1Q8WUD6 406 aa3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 ANKRD49Q8WVL7 239 aa3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 THRSPQ92748 146 aa3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 SNRNP40Q96DI7 357 aaKnown RBP3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 EEF2KMTQ96G04 330 aa3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 ZNF577Q9BSK1 485 aa3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 EDEM2Q9BV94 578 aa3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 PUS3Q9BZE2 481 aaKnown RBP3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 MTIF3Q9H2K0 278 aaKnown RBP3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 CUEDC2Q9H467 287 aa3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 GORASP2Q9H8Y8 452 aa3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 AKIRIN1Q9H9L7 192 aaPredicted RBP3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 THAP10Q9P2Z0 257 aaPredicted RBP3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 PLEKHA6Q9Y2H5 1048 aa3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 MRPS18CQ9Y3D5 142 aaKnown RBP3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 KIAA1217Q5T5P2 1943 aa3.23□□□□□ -1.89
SMARCA1-204ENST00000478420 IGHV3-38A0A0C4DH36 116 aa3.22□□□□□ -1.89
SMARCA1-204ENST00000478420 TRBV2A0A0J9YWF9 115 aa3.22□□□□□ -1.89
SMARCA1-204ENST00000478420 CFAP73A6NFT4 308 aa3.22□□□□□ -1.89
SMARCA1-204ENST00000478420 LMO7DNF2Z398 122 aa3.22□□□□□ -1.89
SMARCA1-204ENST00000478420 F8WDY8 70 aa3.22□□□□□ -1.89
SMARCA1-204ENST00000478420 M0R296 226 aa3.22□□□□□ -1.89
SMARCA1-204ENST00000478420 CXCL11O14625 94 aa3.22□□□□□ -1.89
SMARCA1-204ENST00000478420 INPP4BO15327 924 aa3.22□□□□□ -1.89
SMARCA1-204ENST00000478420 TNFSF12O43508 249 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms