RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 DGAT2Q96PD7 388 aa9.59□□□□□ -0.87
HDAC6-222ENST00000478095 SORT1Q99523 831 aa9.59□□□□□ -0.87
HDAC6-222ENST00000478095 SH3GL2Q99962 352 aa9.59□□□□□ -0.87
HDAC6-222ENST00000478095 LRTM1Q9HBL6 345 aa9.59□□□□□ -0.87
HDAC6-222ENST00000478095 MMP25Q9NPA2 562 aa9.59□□□□□ -0.87
HDAC6-222ENST00000478095 ZNF446Q9NWS9 450 aa9.59□□□□□ -0.87
HDAC6-222ENST00000478095 VTI1BQ9UEU0 232 aa9.59□□□□□ -0.87
HDAC6-222ENST00000478095 DLGAP4Q9Y2H0 992 aa9.59□□□□□ -0.87
HDAC6-222ENST00000478095 PCDHA9Q9Y5H5 950 aa9.59□□□□□ -0.87
HDAC6-222ENST00000478095 CLCA3PQ9Y6N3 262 aa9.59□□□□□ -0.87
HDAC6-222ENST00000478095 SMG1Q96Q15 3661 aaKnown RBP9.58□□□□□ -0.88
HDAC6-222ENST00000478095 ATP6AP2A0A1C7CYW4 349 aa9.58□□□□□ -0.88
HDAC6-222ENST00000478095 OR10H2O60403 315 aa9.58□□□□□ -0.88
HDAC6-222ENST00000478095 GUCY1B2O75343 617 aa9.58□□□□□ -0.88
HDAC6-222ENST00000478095 SEC22BO75396 215 aa9.58□□□□□ -0.88
HDAC6-222ENST00000478095 ERAL1O75616 437 aaKnown RBP9.58□□□□□ -0.88
HDAC6-222ENST00000478095 ATP6AP2O75787 350 aa9.58□□□□□ -0.88
HDAC6-222ENST00000478095 GPR75O95800 540 aa9.58□□□□□ -0.88
HDAC6-222ENST00000478095 JUNP05412 331 aaKnown RBP9.58□□□□□ -0.88
HDAC6-222ENST00000478095 ANXA4P09525 319 aaPredicted RBP9.58□□□□□ -0.88
HDAC6-222ENST00000478095 ALOX15P16050 662 aaPredicted RBP9.58□□□□□ -0.88
HDAC6-222ENST00000478095 GRK2P25098 689 aa9.58□□□□□ -0.88
HDAC6-222ENST00000478095 PTGER1P34995 402 aa9.58□□□□□ -0.88
HDAC6-222ENST00000478095 SOX11P35716 441 aa9.58□□□□□ -0.88
HDAC6-222ENST00000478095 RPL38P63173 70 aaKnown RBP9.58□□□□□ -0.88
HDAC6-222ENST00000478095 IGLV3-21P80748 117 aaPredicted RBP9.58□□□□□ -0.88
HDAC6-222ENST00000478095 PLIN5Q00G26 463 aa9.58□□□□□ -0.88
HDAC6-222ENST00000478095 ZNF763Q0D2J5 394 aa9.58□□□□□ -0.88
HDAC6-222ENST00000478095 KLRB1Q12918 225 aa9.58□□□□□ -0.88
HDAC6-222ENST00000478095 STX3Q13277 289 aa9.58□□□□□ -0.88
HDAC6-222ENST00000478095 MFAP5Q13361 173 aa9.58□□□□□ -0.88
HDAC6-222ENST00000478095 PDCD2Q16342 344 aaPredicted RBP9.58□□□□□ -0.88
HDAC6-222ENST00000478095 GALNTL6Q49A17 601 aa9.58□□□□□ -0.88
HDAC6-222ENST00000478095 CRB2Q5IJ48 1285 aa9.58□□□□□ -0.88
HDAC6-222ENST00000478095 JMJD6Q6NYC1 403 aaPredicted RBP9.58□□□□□ -0.88
HDAC6-222ENST00000478095 SLC48A1Q6P1K1 146 aa9.58□□□□□ -0.88
HDAC6-222ENST00000478095 GALNT18Q6P9A2 607 aa9.58□□□□□ -0.88
HDAC6-222ENST00000478095 PRICKLE2Q7Z3G6 844 aa9.58□□□□□ -0.88
HDAC6-222ENST00000478095 RETREG3Q86VR2 466 aa9.58□□□□□ -0.88
HDAC6-222ENST00000478095 CRLF3Q8IUI8 442 aa9.58□□□□□ -0.88
HDAC6-222ENST00000478095 TMEM132CQ8N3T6 1108 aa9.58□□□□□ -0.88
HDAC6-222ENST00000478095 RBMXL3Q8N7X1 1067 aaKnown RBP9.58□□□□□ -0.88
HDAC6-222ENST00000478095 TEX19Q8NA77 164 aa9.58□□□□□ -0.88
HDAC6-222ENST00000478095 B3GNT7Q8NFL0 401 aa9.58□□□□□ -0.88
HDAC6-222ENST00000478095 ELP5Q8TE02 316 aa9.58□□□□□ -0.88
HDAC6-222ENST00000478095 C16orf78Q8WTQ4 265 aa9.58□□□□□ -0.88
HDAC6-222ENST00000478095 THAP3Q8WTV1 239 aaPredicted RBP9.58□□□□□ -0.88
HDAC6-222ENST00000478095 TM9SF4Q92544 642 aa9.58□□□□□ -0.88
HDAC6-222ENST00000478095 KLHL29Q96CT2 875 aa9.58□□□□□ -0.88
HDAC6-222ENST00000478095 C11orf24Q96F05 449 aaPredicted RBP9.58□□□□□ -0.88
HDAC6-222ENST00000478095 NPAS2Q99743 824 aa9.58□□□□□ -0.88
HDAC6-222ENST00000478095 CNPPD1Q9BV87 410 aa9.58□□□□□ -0.88
HDAC6-222ENST00000478095 FAIM2Q9BWQ8 316 aa9.58□□□□□ -0.88
HDAC6-222ENST00000478095 OR8D2Q9GZM6 311 aa9.58□□□□□ -0.88
HDAC6-222ENST00000478095 EPS8L2Q9H6S3 715 aa9.58□□□□□ -0.88
HDAC6-222ENST00000478095 C1orf109Q9NX04 203 aa9.58□□□□□ -0.88
HDAC6-222ENST00000478095 PLA2G3Q9NZ20 509 aa9.58□□□□□ -0.88
HDAC6-222ENST00000478095 HEY2Q9UBP5 337 aa9.58□□□□□ -0.88
HDAC6-222ENST00000478095 ZNF223Q9UK11 482 aaPredicted RBP9.58□□□□□ -0.88
HDAC6-222ENST00000478095 PCDHGB7Q9Y5F8 929 aa9.58□□□□□ -0.88
HDAC6-222ENST00000478095 HEMK1Q9Y5R4 338 aaPredicted RBP9.58□□□□□ -0.88
HDAC6-222ENST00000478095 PIEZO2Q9H5I5 2752 aa9.58□□□□□ -0.88
HDAC6-222ENST00000478095 BOD1L1Q8NFC6 3051 aa9.57□□□□□ -0.88
HDAC6-222ENST00000478095 C1orf226A1L170 272 aa9.57□□□□□ -0.88
HDAC6-222ENST00000478095 HMGB1P1B2RPK0 211 aaPredicted RBP9.57□□□□□ -0.88
HDAC6-222ENST00000478095 B8ZZF3 427 aa9.57□□□□□ -0.88
HDAC6-222ENST00000478095 HRKO00198 91 aa9.57□□□□□ -0.88
HDAC6-222ENST00000478095 LSM1O15116 133 aaKnown RBP9.57□□□□□ -0.88
HDAC6-222ENST00000478095 PRKNO60260 465 aaPredicted RBP9.57□□□□□ -0.88
HDAC6-222ENST00000478095 KLHL41O60662 606 aa9.57□□□□□ -0.88
HDAC6-222ENST00000478095 DPM1O60762 260 aa9.57□□□□□ -0.88
HDAC6-222ENST00000478095 PEX11AO75192 247 aa9.57□□□□□ -0.88
HDAC6-222ENST00000478095 DDAH2O95865 285 aa9.57□□□□□ -0.88
HDAC6-222ENST00000478095 WDPCPO95876 746 aa9.57□□□□□ -0.88
HDAC6-222ENST00000478095 COX7A2P14406 83 aa9.57□□□□□ -0.88
HDAC6-222ENST00000478095 TACR1P25103 407 aa9.57□□□□□ -0.88
HDAC6-222ENST00000478095 PIK3R1P27986 724 aa9.57□□□□□ -0.88
HDAC6-222ENST00000478095 FEN1P39748 380 aaKnown RBP9.57□□□□□ -0.88
HDAC6-222ENST00000478095 MMP16P51512 607 aa9.57□□□□□ -0.88
HDAC6-222ENST00000478095 CLCN2P51788 898 aa9.57□□□□□ -0.88
HDAC6-222ENST00000478095 XKP51811 444 aa9.57□□□□□ -0.88
HDAC6-222ENST00000478095 SLC18A1P54219 525 aa9.57□□□□□ -0.88
HDAC6-222ENST00000478095 TRA2BP62995 288 aaKnown RBP9.57□□□□□ -0.88
HDAC6-222ENST00000478095 AP2B1P63010 937 aa9.57□□□□□ -0.88
HDAC6-222ENST00000478095 ARG2P78540 354 aa9.57□□□□□ -0.88
HDAC6-222ENST00000478095 ZNF267Q14586 743 aaPredicted RBP9.57□□□□□ -0.88
HDAC6-222ENST00000478095 KIAA0040Q15053 153 aa9.57□□□□□ -0.88
HDAC6-222ENST00000478095 TERF2Q15554 542 aa9.57□□□□□ -0.88
HDAC6-222ENST00000478095 RFTN2Q52LD8 501 aaPredicted RBP9.57□□□□□ -0.88
HDAC6-222ENST00000478095 XKR7Q5GH72 579 aa9.57□□□□□ -0.88
HDAC6-222ENST00000478095 ACER2Q5QJU3 275 aa9.57□□□□□ -0.88
HDAC6-222ENST00000478095 ABHD17BQ5VST6 288 aa9.57□□□□□ -0.88
HDAC6-222ENST00000478095 SLC6A19Q695T7 634 aa9.57□□□□□ -0.88
HDAC6-222ENST00000478095 NOXRED1Q6NXP6 359 aa9.57□□□□□ -0.88
HDAC6-222ENST00000478095 RNF165Q6ZSG1 346 aa9.57□□□□□ -0.88
HDAC6-222ENST00000478095 ST13P4Q8IZP2 240 aaPredicted RBP9.57□□□□□ -0.88
HDAC6-222ENST00000478095 BEST3Q8N1M1 668 aa9.57□□□□□ -0.88
HDAC6-222ENST00000478095 ZADH2Q8N4Q0 377 aa9.57□□□□□ -0.88
HDAC6-222ENST00000478095 SLC5A8Q8N695 610 aa9.57□□□□□ -0.88
HDAC6-222ENST00000478095 CATSPER1Q8NEC5 780 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms