RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 NINQ8N4C6 2090 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 PTPN13Q12923 2485 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 NUMA1Q14980 2115 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 GCN1Q92616 2671 aaKnown RBP4.71□□□□□ -1.65
SF3B6-202ENST00000478050 HEATR5BQ9P2D3 2071 aa4.71□□□□□ -1.65
SF3B6-202ENST00000478050 GNG14A0A1W2PPG7 69 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 C1orf226A1L170 272 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 BLACEA4D250 179 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 TMEM202A6NGA9 273 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 EPOPA6NHQ4 379 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 GABRR3A8MPY1 467 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 A8MVJ9 347 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 TTC34A8MYJ7 566 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 ALG1L2C9J202 215 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 PTGES3LE9PB15 166 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 E9PQ18 207 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 TMX2-CTNND1H3BSU7 103 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 hCG_2039718K7EN88 272 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 NPC1O15118 1278 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 ADAMDEC1O15204 470 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 SLC22A1O15245 554 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 RGS10O43665 173 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 PCDH7O60245 1069 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 MITFO75030 526 aaPredicted RBP4.71□□□□□ -1.66
SF3B6-202ENST00000478050 FAM20BO75063 409 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 INMTO95050 263 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 GABARAPO95166 117 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 C1orf105O95561 183 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 KRT75O95678 551 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 RB1P06400 928 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 CTSLP07711 333 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 RHOP08100 348 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 HNRNPA1P09651 372 aaKnown RBP eCLIP4.71□□□□□ -1.66
SF3B6-202ENST00000478050 C1GALT1C1LP0DN25 315 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 LAMP1P11279 417 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 ZNF182P17025 639 aaPredicted RBP4.71□□□□□ -1.66
SF3B6-202ENST00000478050 DDX5P17844 614 aaKnown RBP4.71□□□□□ -1.66
SF3B6-202ENST00000478050 EFNA1P20827 205 aaPredicted RBP4.71□□□□□ -1.66
SF3B6-202ENST00000478050 CD247P20963 164 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 HTR1BP28222 390 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 HOXA9P31269 272 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 GRK3P35626 688 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 SERPINB10P48595 397 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 PXNP49023 591 aaPredicted RBP4.71□□□□□ -1.66
SF3B6-202ENST00000478050 CTSCP53634 463 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 ST8SIA6P61647 398 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 RPS13P62277 151 aaKnown RBP4.71□□□□□ -1.66
SF3B6-202ENST00000478050 TBPL1P62380 186 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 SLC35A2P78381 396 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 HTRA4P83105 476 aaPredicted RBP4.71□□□□□ -1.66
SF3B6-202ENST00000478050 VLDLRP98155 873 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 IL1RL1Q01638 556 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 TEKQ02763 1124 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 OCA2Q04671 838 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 ZNF763Q0D2J5 394 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 FCHO2Q0JRZ9 810 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 ELP6Q0PNE2 266 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 PPP1R8Q12972 351 aaKnown RBP4.71□□□□□ -1.66
SF3B6-202ENST00000478050 FADDQ13158 208 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 SIM2Q14190 667 aaPredicted RBP4.71□□□□□ -1.66
SF3B6-202ENST00000478050 MAD2L1BPQ15013 274 aaPredicted RBP4.71□□□□□ -1.66
SF3B6-202ENST00000478050 RGNQ15493 299 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 NPTX1Q15818 432 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 HKDC1Q2TB90 917 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 IFI44LQ53G44 452 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 GCNT6Q5T4J0 391 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 SYT6Q5T7P8 510 aaPredicted RBP4.71□□□□□ -1.66
SF3B6-202ENST00000478050 TMEM215Q68D42 235 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 C16orf87Q6PH81 154 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 CRTC3Q6UUV7 619 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 LIPIQ6XZB0 460 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 SLC16A12Q6ZSM3 486 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 CCDC80Q76M96 950 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 CEP68Q76N32 757 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 PARS2Q7L3T8 475 aaKnown RBP4.71□□□□□ -1.66
SF3B6-202ENST00000478050 OTOP2Q7RTS6 562 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 PRSS48Q7RTY5 328 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 VTCN1Q7Z7D3 282 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 B3GNT8Q7Z7M8 397 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 GALNT5Q7Z7M9 940 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 TMPRSS11BQ86T26 416 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 ZNF554Q86TJ5 538 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 LAS2Q8IYD9 372 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 CLECL1Q8IZS7 167 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 RNF175Q8N4F7 328 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 NATD1Q8N6N6 113 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 ATG16L2Q8NAA4 619 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 DTWD2Q8NBA8 298 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 OR52N2Q8NGI0 321 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 OR4A15Q8NGL6 344 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 OR9A1PQ8NGU1 263 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 HUS1BQ8NHY5 278 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 CNIH3Q8TBE1 160 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 GIPC3Q8TF64 312 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 SETD7Q8WTS6 366 aaKnown RBP4.71□□□□□ -1.66
SF3B6-202ENST00000478050 S100ZQ8WXG8 99 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 SGCDQ92629 289 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 FCGR1BQ92637 280 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 TANKQ92844 425 aa4.71□□□□□ -1.66
SF3B6-202ENST00000478050 ABTB1Q969K4 478 aaPredicted RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms