RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 TBCELQ5QJ74 424 aa18.53■□□□□ 0.56
PDLIM1-202ENST00000477757 CNTN4Q8IWV2 1026 aa18.53■□□□□ 0.56
PDLIM1-202ENST00000477757 KRT78Q8N1N4 520 aa18.53■□□□□ 0.56
PDLIM1-202ENST00000477757 C9orf106Q8NAJ2 232 aa18.53■□□□□ 0.56
PDLIM1-202ENST00000477757 ANKRD9Q96BM1 317 aaPredicted RBP18.53■□□□□ 0.56
PDLIM1-202ENST00000477757 PERPQ96FX8 193 aa18.53■□□□□ 0.56
PDLIM1-202ENST00000477757 PDLIM5Q96HC4 596 aaKnown RBP18.53■□□□□ 0.56
PDLIM1-202ENST00000477757 SIGLEC10Q96LC7 697 aa18.53■□□□□ 0.56
PDLIM1-202ENST00000477757 BAG1Q99933 345 aaPredicted RBP18.53■□□□□ 0.56
PDLIM1-202ENST00000477757 SFXN3Q9BWM7 321 aa18.53■□□□□ 0.56
PDLIM1-202ENST00000477757 PITHD1Q9GZP4 211 aaPredicted RBP18.53■□□□□ 0.56
PDLIM1-202ENST00000477757 NT5DC2Q9H857 520 aa18.53■□□□□ 0.56
PDLIM1-202ENST00000477757 SONP18583 2426 aaKnown RBP18.53■□□□□ 0.56
PDLIM1-202ENST00000477757 ANKRD33BA6NCL7 494 aa18.52■□□□□ 0.56
PDLIM1-202ENST00000477757 CRLF1O75462 422 aa18.52■□□□□ 0.56
PDLIM1-202ENST00000477757 AHSGP02765 367 aa18.52■□□□□ 0.56
PDLIM1-202ENST00000477757 MSH2P43246 934 aa18.52■□□□□ 0.56
PDLIM1-202ENST00000477757 STT3AP46977 705 aa18.52■□□□□ 0.56
PDLIM1-202ENST00000477757 CPA2P48052 419 aa18.52■□□□□ 0.56
PDLIM1-202ENST00000477757 CDKL1Q00532 357 aa18.52■□□□□ 0.56
PDLIM1-202ENST00000477757 TGM3Q08188 693 aa18.52■□□□□ 0.56
PDLIM1-202ENST00000477757 NTRK2Q16620 822 aa18.52■□□□□ 0.56
PDLIM1-202ENST00000477757 DCST1Q5T197 706 aa18.52■□□□□ 0.56
PDLIM1-202ENST00000477757 GALNT7Q86SF2 657 aa18.52■□□□□ 0.56
PDLIM1-202ENST00000477757 C7orf57Q8NEG2 295 aa18.52■□□□□ 0.56
PDLIM1-202ENST00000477757 WDYHV1Q96HA8 205 aa18.52■□□□□ 0.56
PDLIM1-202ENST00000477757 FBXL20Q96IG2 436 aa18.52■□□□□ 0.56
PDLIM1-202ENST00000477757 ART5Q96L15 291 aa18.52■□□□□ 0.56
PDLIM1-202ENST00000477757 CCL19Q99731 98 aa18.52■□□□□ 0.56
PDLIM1-202ENST00000477757 UGT2B28Q9BY64 529 aa18.52■□□□□ 0.56
PDLIM1-202ENST00000477757 PRDM7Q9NQW5 492 aa18.52■□□□□ 0.56
PDLIM1-202ENST00000477757 SLC6A5Q9Y345 797 aa18.52■□□□□ 0.56
PDLIM1-202ENST00000477757 FREM3P0C091 2139 aa18.52■□□□□ 0.55
PDLIM1-202ENST00000477757 ANKDD1BA6NHY2 528 aa18.51■□□□□ 0.55
PDLIM1-202ENST00000477757 HRKO00198 91 aa18.51■□□□□ 0.55
PDLIM1-202ENST00000477757 CASKO14936 926 aa18.51■□□□□ 0.55
PDLIM1-202ENST00000477757 TRAPPC6AO75865 159 aa18.51■□□□□ 0.55
PDLIM1-202ENST00000477757 WDR47O94967 919 aa18.51■□□□□ 0.55
PDLIM1-202ENST00000477757 PGAM1P18669 254 aa18.51■□□□□ 0.55
PDLIM1-202ENST00000477757 SLC6A12P48065 614 aa18.51■□□□□ 0.55
PDLIM1-202ENST00000477757 KCNC1P48547 511 aa18.51■□□□□ 0.55
PDLIM1-202ENST00000477757 HNMTP50135 292 aa18.51■□□□□ 0.55
PDLIM1-202ENST00000477757 FOXF2Q12947 444 aa18.51■□□□□ 0.55
PDLIM1-202ENST00000477757 ADNP2Q6IQ32 1131 aa18.51■□□□□ 0.55
PDLIM1-202ENST00000477757 ZNF793Q6ZN11 406 aa18.51■□□□□ 0.55
PDLIM1-202ENST00000477757 LUZP2Q86TE4 346 aa18.51■□□□□ 0.55
PDLIM1-202ENST00000477757 ZFP3Q96NJ6 502 aa18.51■□□□□ 0.55
PDLIM1-202ENST00000477757 DGAT2Q96PD7 388 aa18.51■□□□□ 0.55
PDLIM1-202ENST00000477757 KCNC2Q96PR1 638 aa18.51■□□□□ 0.55
PDLIM1-202ENST00000477757 GAL3ST4Q96RP7 486 aa18.51■□□□□ 0.55
PDLIM1-202ENST00000477757 MAPKAP1Q9BPZ7 522 aa18.51■□□□□ 0.55
PDLIM1-202ENST00000477757 ROGDIQ9GZN7 287 aa18.51■□□□□ 0.55
PDLIM1-202ENST00000477757 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.51■□□□□ 0.55
PDLIM1-202ENST00000477757 C15orf41Q9Y2V0 281 aa18.51■□□□□ 0.55
PDLIM1-202ENST00000477757 NPFFR2Q9Y5X5 522 aa18.51■□□□□ 0.55
PDLIM1-202ENST00000477757 SIAH2O43255 324 aa18.5■□□□□ 0.55
PDLIM1-202ENST00000477757 DYRK3O43781 588 aa18.5■□□□□ 0.55
PDLIM1-202ENST00000477757 FGF17O60258 216 aa18.5■□□□□ 0.55
PDLIM1-202ENST00000477757 KRT14P02533 472 aa18.5■□□□□ 0.55
PDLIM1-202ENST00000477757 FPR1P21462 350 aa18.5■□□□□ 0.55
PDLIM1-202ENST00000477757 CBLBQ13191 982 aa18.5■□□□□ 0.55
PDLIM1-202ENST00000477757 RCAN2Q14206 197 aa18.5■□□□□ 0.55
PDLIM1-202ENST00000477757 PPP1R14CQ8TAE6 165 aa18.5■□□□□ 0.55
PDLIM1-202ENST00000477757 DIO2Q92813 273 aa18.5■□□□□ 0.55
PDLIM1-202ENST00000477757 EGFL8Q99944 293 aa18.5■□□□□ 0.55
PDLIM1-202ENST00000477757 WWTR1Q9GZV5 400 aa18.5■□□□□ 0.55
PDLIM1-202ENST00000477757 NDRG3Q9UGV2 375 aa18.5■□□□□ 0.55
PDLIM1-202ENST00000477757 CORO1CQ9ULV4 474 aaPredicted RBP18.5■□□□□ 0.55
PDLIM1-202ENST00000477757 SPACA6W5XKT8 324 aa18.5■□□□□ 0.55
PDLIM1-202ENST00000477757 NINQ8N4C6 2090 aa18.5■□□□□ 0.55
PDLIM1-202ENST00000477757 CHD3Q12873 2000 aaKnown RBP18.49■□□□□ 0.55
PDLIM1-202ENST00000477757 NPEPPSL1A6NEC2 478 aa18.49■□□□□ 0.55
PDLIM1-202ENST00000477757 CDC7O00311 574 aa18.49■□□□□ 0.55
PDLIM1-202ENST00000477757 ACSL3O95573 720 aa18.49■□□□□ 0.55
PDLIM1-202ENST00000477757 ZNF37AP17032 561 aaPredicted RBP18.49■□□□□ 0.55
PDLIM1-202ENST00000477757 RPL21P46778 160 aaKnown RBP18.49■□□□□ 0.55
PDLIM1-202ENST00000477757 PLIN5Q00G26 463 aa18.49■□□□□ 0.55
PDLIM1-202ENST00000477757 RPS6KA2Q15349 733 aa18.49■□□□□ 0.55
PDLIM1-202ENST00000477757 ACKR1Q16570 336 aa18.49■□□□□ 0.55
PDLIM1-202ENST00000477757 FNDC7Q5VTL7 733 aa18.49■□□□□ 0.55
PDLIM1-202ENST00000477757 FAM45BPQ6NSW5 357 aa18.49■□□□□ 0.55
PDLIM1-202ENST00000477757 DGAT2L6Q6ZPD8 337 aa18.49■□□□□ 0.55
PDLIM1-202ENST00000477757 SLC29A4Q7RTT9 530 aa18.49■□□□□ 0.55
PDLIM1-202ENST00000477757 FAM45AQ8TCE6 357 aa18.49■□□□□ 0.55
PDLIM1-202ENST00000477757 ZPLD1Q8TCW7 415 aa18.49■□□□□ 0.55
PDLIM1-202ENST00000477757 ANKRD7Q92527 254 aa18.49■□□□□ 0.55
PDLIM1-202ENST00000477757 RILPQ96NA2 401 aa18.49■□□□□ 0.55
PDLIM1-202ENST00000477757 F2RL3Q96RI0 385 aa18.49■□□□□ 0.55
PDLIM1-202ENST00000477757 GSX2Q9BZM3 304 aa18.49■□□□□ 0.55
PDLIM1-202ENST00000477757 EHD1Q9H4M9 534 aa18.49■□□□□ 0.55
PDLIM1-202ENST00000477757 UBTD1Q9HAC8 227 aa18.49■□□□□ 0.55
PDLIM1-202ENST00000477757 C6orf203Q9P0P8 240 aaPredicted RBP18.49■□□□□ 0.55
PDLIM1-202ENST00000477757 SLC17A6Q9P2U8 582 aa18.49■□□□□ 0.55
PDLIM1-202ENST00000477757 OARD1Q9Y530 152 aa18.49■□□□□ 0.55
PDLIM1-202ENST00000477757 RNF212BA8MTL3 300 aa18.48■□□□□ 0.55
PDLIM1-202ENST00000477757 DEFB108AA8MXU0 73 aa18.48■□□□□ 0.55
PDLIM1-202ENST00000477757 CTIFO43310 598 aaKnown RBP18.48■□□□□ 0.55
PDLIM1-202ENST00000477757 SCELO95171 688 aa18.48■□□□□ 0.55
PDLIM1-202ENST00000477757 SNX4O95219 450 aa18.48■□□□□ 0.55
PDLIM1-202ENST00000477757 CNOT4O95628 575 aaKnown RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms