RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 MTFR2Q6P444 385 aa4.28□□□□□ -1.72
CKS1B-207ENST00000477676 Q6ZNX1 250 aa4.28□□□□□ -1.72
CKS1B-207ENST00000477676 FKBP9P1Q75LS8 142 aa4.28□□□□□ -1.72
CKS1B-207ENST00000477676 GALNTL5Q7Z4T8 443 aa4.28□□□□□ -1.72
CKS1B-207ENST00000477676 VN1R4Q7Z5H5 301 aa4.28□□□□□ -1.72
CKS1B-207ENST00000477676 CPEB2Q7Z5Q1 589 aaKnown RBP4.28□□□□□ -1.72
CKS1B-207ENST00000477676 ANKRD37Q7Z713 158 aa4.28□□□□□ -1.72
CKS1B-207ENST00000477676 STRA8Q7Z7C7 330 aa4.28□□□□□ -1.72
CKS1B-207ENST00000477676 PDSS2Q86YH6 399 aa4.28□□□□□ -1.72
CKS1B-207ENST00000477676 CDKL3Q8IVW4 592 aaPredicted RBP4.28□□□□□ -1.72
CKS1B-207ENST00000477676 VSTM4Q8IW00 320 aa4.28□□□□□ -1.72
CKS1B-207ENST00000477676 MYO1HQ8N1T3 1032 aa4.28□□□□□ -1.72
CKS1B-207ENST00000477676 TMEM132CQ8N3T6 1108 aa4.28□□□□□ -1.72
CKS1B-207ENST00000477676 KIF2BQ8N4N8 673 aa4.28□□□□□ -1.72
CKS1B-207ENST00000477676 CPSF7Q8N684 471 aaKnown RBP4.28□□□□□ -1.72
CKS1B-207ENST00000477676 CSNK1A1LQ8N752 337 aa4.28□□□□□ -1.72
CKS1B-207ENST00000477676 LRRC57Q8N9N7 239 aa4.28□□□□□ -1.72
CKS1B-207ENST00000477676 PPFIBP2Q8ND30 876 aa4.28□□□□□ -1.72
CKS1B-207ENST00000477676 OR9A4Q8NGU2 314 aa4.28□□□□□ -1.72
CKS1B-207ENST00000477676 PHF10Q8WUB8 498 aaKnown RBP4.28□□□□□ -1.72
CKS1B-207ENST00000477676 ASZ1Q8WWH4 475 aa4.28□□□□□ -1.72
CKS1B-207ENST00000477676 ASB10Q8WXI3 467 aa4.28□□□□□ -1.72
CKS1B-207ENST00000477676 SLC22A18Q96BI1 424 aa4.28□□□□□ -1.72
CKS1B-207ENST00000477676 SDCCAG3Q96C92 435 aa4.28□□□□□ -1.72
CKS1B-207ENST00000477676 MMABQ96EY8 250 aaPredicted RBP4.28□□□□□ -1.72
CKS1B-207ENST00000477676 CABS1Q96KC9 395 aa4.28□□□□□ -1.72
CKS1B-207ENST00000477676 CCDC42Q96M95 316 aa4.28□□□□□ -1.72
CKS1B-207ENST00000477676 Q96MF0 132 aa4.28□□□□□ -1.72
CKS1B-207ENST00000477676 BIRC8Q96P09 236 aa4.28□□□□□ -1.72
CKS1B-207ENST00000477676 CYTH2Q99418 400 aa4.28□□□□□ -1.72
CKS1B-207ENST00000477676 CXXC4Q9H2H0 198 aa4.28□□□□□ -1.72
CKS1B-207ENST00000477676 LRRC40Q9H9A6 602 aa4.28□□□□□ -1.72
CKS1B-207ENST00000477676 MKKSQ9NPJ1 570 aaPredicted RBP4.28□□□□□ -1.72
CKS1B-207ENST00000477676 LANCL2Q9NS86 450 aa4.28□□□□□ -1.72
CKS1B-207ENST00000477676 SLC39A10Q9ULF5 831 aa4.28□□□□□ -1.72
CKS1B-207ENST00000477676 TTC7AQ9ULT0 858 aaPredicted RBP4.28□□□□□ -1.72
CKS1B-207ENST00000477676 SH2B3Q9UQQ2 575 aa4.28□□□□□ -1.72
CKS1B-207ENST00000477676 MTO1Q9Y2Z2 717 aaKnown RBP4.28□□□□□ -1.72
CKS1B-207ENST00000477676 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.28□□□□□ -1.72
CKS1B-207ENST00000477676 COMMD10Q9Y6G5 202 aa4.28□□□□□ -1.72
CKS1B-207ENST00000477676 USF3Q68DE3 2245 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 ABCA1O95477 2261 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 CTAGE15A4D2H0 777 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 GABRR3A8MPY1 467 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 E9PLN8 166 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 SGK494L7N484 410 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 MYO1CO00159 1063 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 QSOX1O00391 747 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 PRMT5O14744 637 aaPredicted RBP4.27□□□□□ -1.73
CKS1B-207ENST00000477676 LCMT2O60294 686 aaKnown RBP4.27□□□□□ -1.73
CKS1B-207ENST00000477676 NIPSNAP2O75323 286 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 PROP1O75360 226 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 ERN1O75460 977 aaKnown RBP4.27□□□□□ -1.73
CKS1B-207ENST00000477676 SUN1O94901 812 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 NADKO95544 446 aaPredicted RBP4.27□□□□□ -1.73
CKS1B-207ENST00000477676 SCGB1D2O95969 90 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 IGLV2-14P01704 120 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 SP1P08047 785 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 C8orf89P0DMQ9 161 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 CCND1P24385 295 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 CXCR2P25025 360 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 CTNNA2P26232 953 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 NMBRP28336 390 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 ECHS1P30084 290 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 GNALP38405 381 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 RFC3P40938 356 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 DLX5P56178 289 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 RHAGQ02094 409 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 PRDX1Q06830 199 aaKnown RBP4.27□□□□□ -1.73
CKS1B-207ENST00000477676 FOXF2Q12947 444 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 SP140Q13342 867 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 FAM53BQ14153 422 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 KCNJ11Q14654 390 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 OASLQ15646 514 aaKnown RBP4.27□□□□□ -1.73
CKS1B-207ENST00000477676 LONRF1Q17RB8 773 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 BTBD16Q32M84 506 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 GFOD2Q3B7J2 385 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 KRTCAP3Q53RY4 240 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 CMPK2Q5EBM0 449 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 ACSBG2Q5FVE4 666 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 ICE2Q659A1 982 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 NXNQ6DKJ4 435 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 PPP4R4Q6NUP7 873 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 AFTPHQ6ULP2 937 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 CTAGE6Q86UF2 777 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 CCDC71Q8IV32 467 aaPredicted RBP4.27□□□□□ -1.73
CKS1B-207ENST00000477676 TC2NQ8N9U0 490 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 OR9A1PQ8NGU1 263 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 ATG4AQ8WYN0 398 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 TSLPQ969D9 159 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 RAD51AP1Q96B01 352 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 FAM136AQ96C01 138 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 MVB12AQ96EY5 273 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 MAGED4Q96JG8 741 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 PKP4Q99569 1192 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 VKORC1Q9BQB6 163 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 TUBB6Q9BUF5 446 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 DRC3Q9H069 523 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 BCO1Q9HAY6 547 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 CHRAC1Q9NRG0 131 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms