RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 LATS2Q9NRM7 1088 aa14.54□□□□□ -0.08
CLSTN1-205ENST00000477264 UBQLN2Q9UHD9 624 aa14.54□□□□□ -0.08
CLSTN1-205ENST00000477264 SLC6A14Q9UN76 642 aa14.54□□□□□ -0.08
CLSTN1-205ENST00000477264 INSL6Q9Y581 213 aa14.54□□□□□ -0.08
CLSTN1-205ENST00000477264 CSNK1G3Q9Y6M4 447 aa14.54□□□□□ -0.08
CLSTN1-205ENST00000477264 PIKFYVEQ9Y2I7 2098 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 RPS10-NUDT3A0A1W2PQS6 291 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 C7orf66A4D0T2 115 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 F5H5T6 163 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 KDELR3O43731 214 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 CHP2O43745 196 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 SCO1O75880 301 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 SLC25A14O95258 325 aaPredicted RBP14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 IFNA16P05015 189 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 URODP06132 367 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 CLEC2LP0C7M8 214 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 OR56A5P0C7T3 313 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 SRCP12931 536 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 RPL17P18621 184 aaKnown RBP14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 TACR2P21452 398 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 STOMP27105 288 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 SSTR4P31391 388 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 GPR15P49685 360 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 ADAM15Q13444 863 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 DSG2Q14126 1118 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 GARNL3Q5VVW2 1013 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 BRAT1Q6PJG6 821 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 CASP12Q6UXS9 341 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 MACC1Q6ZN28 852 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 GPAT4Q86UL3 456 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 SERPINA9Q86WD7 417 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 FAM217AQ8IXS0 508 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 LKAAEAR1Q8TD35 194 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 HGDQ93099 445 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 CXorf40BQ96DE9 158 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 COPS8Q99627 209 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 TSSK6Q9BXA6 273 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 MGAT4BQ9UQ53 548 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 FNDC3AQ9Y2H6 1198 aaKnown RBP14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 SNX11Q9Y5W9 270 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 DHFRP00374 187 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 TRBC1P01850 177 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 RRASP10301 218 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 ITGALP20701 1170 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 GSTM5P46439 218 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 SOX9P48436 509 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 EVX1P49640 407 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 SCARB2Q14108 478 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 IL18Q14116 193 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 DUSP6Q16828 381 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 CRB2Q5IJ48 1285 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 C3orf38Q5JPI3 329 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 TMEM240Q5SV17 173 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 USP30Q70CQ3 517 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 TRILQ7L0X0 811 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 PDZD3Q86UT5 571 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 SORCS2Q96PQ0 1159 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 GFM1Q96RP9 751 aaKnown RBP14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 TM9SF2Q99805 663 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 TCF25Q9BQ70 676 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 SLC28A3Q9HAS3 691 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 KCTD5Q9NXV2 234 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 DNAJC27Q9NZQ0 273 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 KCND3Q9UK17 655 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 HCN2Q9UL51 889 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 MGAT4AQ9UM21 535 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 RWDD3Q9Y3V2 267 aa14.53□□□□□ -0.08
CLSTN1-205ENST00000477264 UGDHO60701 494 aa14.52□□□□□ -0.08
CLSTN1-205ENST00000477264 SRPRAP08240 638 aaKnown RBP14.52□□□□□ -0.08
CLSTN1-205ENST00000477264 NR2F6P10588 404 aa14.52□□□□□ -0.08
CLSTN1-205ENST00000477264 HSD3B1P14060 373 aa14.52□□□□□ -0.08
CLSTN1-205ENST00000477264 SYN1P17600 705 aa14.52□□□□□ -0.08
CLSTN1-205ENST00000477264 HSD3B2P26439 372 aa14.52□□□□□ -0.08
CLSTN1-205ENST00000477264 GABRA5P31644 462 aa14.52□□□□□ -0.08
CLSTN1-205ENST00000477264 HNMTP50135 292 aa14.52□□□□□ -0.08
CLSTN1-205ENST00000477264 ETV1P50549 477 aa14.52□□□□□ -0.08
CLSTN1-205ENST00000477264 WNT4P56705 351 aa14.52□□□□□ -0.08
CLSTN1-205ENST00000477264 RAB14P61106 215 aa14.52□□□□□ -0.08
CLSTN1-205ENST00000477264 HTRA4P83105 476 aaPredicted RBP14.52□□□□□ -0.08
CLSTN1-205ENST00000477264 SNTA1Q13424 505 aa14.52□□□□□ -0.08
CLSTN1-205ENST00000477264 TPBGQ13641 420 aa14.52□□□□□ -0.08
CLSTN1-205ENST00000477264 ZNF630Q2M218 657 aaPredicted RBP14.52□□□□□ -0.08
CLSTN1-205ENST00000477264 SLC25A30Q5SVS4 291 aa14.52□□□□□ -0.08
CLSTN1-205ENST00000477264 CPTPQ5TA50 214 aa14.52□□□□□ -0.08
CLSTN1-205ENST00000477264 HACD4Q5VWC8 232 aa14.52□□□□□ -0.08
CLSTN1-205ENST00000477264 CD276Q5ZPR3 534 aa14.52□□□□□ -0.08
CLSTN1-205ENST00000477264 ZNF770Q6IQ21 691 aaPredicted RBP14.52□□□□□ -0.08
CLSTN1-205ENST00000477264 GLCCI1Q86VQ1 547 aa14.52□□□□□ -0.08
CLSTN1-205ENST00000477264 OXR1Q8N573 874 aa14.52□□□□□ -0.08
CLSTN1-205ENST00000477264 PHF21AQ96BD5 680 aa14.52□□□□□ -0.08
CLSTN1-205ENST00000477264 TOE1Q96GM8 510 aaKnown RBP14.52□□□□□ -0.08
CLSTN1-205ENST00000477264 EBPLQ9BY08 206 aa14.52□□□□□ -0.08
CLSTN1-205ENST00000477264 B3GAT2Q9NPZ5 323 aa14.52□□□□□ -0.08
CLSTN1-205ENST00000477264 C11orf16Q9NQ32 467 aa14.52□□□□□ -0.08
CLSTN1-205ENST00000477264 TAS2R7Q9NYW3 318 aa14.52□□□□□ -0.08
CLSTN1-205ENST00000477264 ZNF224Q9NZL3 707 aa14.52□□□□□ -0.08
CLSTN1-205ENST00000477264 MARCH2Q9P0N8 246 aa14.52□□□□□ -0.08
CLSTN1-205ENST00000477264 KIAA1671Q9BY89 1806 aa14.52□□□□□ -0.09
CLSTN1-205ENST00000477264 A0A1B0GVI7 797 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms