RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 PPIEQ9UNP9 301 aaKnown RBP9.04□□□□□ -0.96
HDAC3-208ENST00000476739 TRAF6Q9Y4K3 522 aa9.04□□□□□ -0.96
HDAC3-208ENST00000476739 POLR3HQ9Y535 204 aaPredicted RBP9.04□□□□□ -0.96
HDAC3-208ENST00000476739 PCDHA9Q9Y5H5 950 aa9.04□□□□□ -0.96
HDAC3-208ENST00000476739 TRBV11-1A0A0K0K1C0 115 aa9.03□□□□□ -0.96
HDAC3-208ENST00000476739 TMEM200CA6NKL6 621 aa9.03□□□□□ -0.96
HDAC3-208ENST00000476739 PIP5K1BO14986 540 aa9.03□□□□□ -0.96
HDAC3-208ENST00000476739 BIRC5O15392 142 aa9.03□□□□□ -0.96
HDAC3-208ENST00000476739 SASH3O75995 380 aa9.03□□□□□ -0.96
HDAC3-208ENST00000476739 RSL1D1O76021 490 aaKnown RBP9.03□□□□□ -0.96
HDAC3-208ENST00000476739 DDAH2O95865 285 aa9.03□□□□□ -0.96
HDAC3-208ENST00000476739 JUNP05412 331 aaKnown RBP9.03□□□□□ -0.96
HDAC3-208ENST00000476739 IL3P08700 152 aa9.03□□□□□ -0.96
HDAC3-208ENST00000476739 CT62P0C5K7 136 aa9.03□□□□□ -0.96
HDAC3-208ENST00000476739 PLA2G2AP14555 144 aa9.03□□□□□ -0.96
HDAC3-208ENST00000476739 ALOX15P16050 662 aaPredicted RBP9.03□□□□□ -0.96
HDAC3-208ENST00000476739 TNNI3P19429 210 aa9.03□□□□□ -0.96
HDAC3-208ENST00000476739 CASRP41180 1078 aa9.03□□□□□ -0.96
HDAC3-208ENST00000476739 TAS2R50P59544 299 aa9.03□□□□□ -0.96
HDAC3-208ENST00000476739 ABCE1P61221 599 aaKnown RBP9.03□□□□□ -0.96
HDAC3-208ENST00000476739 DUSP2Q05923 314 aa9.03□□□□□ -0.96
HDAC3-208ENST00000476739 ACSM2AQ08AH3 577 aa9.03□□□□□ -0.96
HDAC3-208ENST00000476739 SERTAD2Q14140 314 aa9.03□□□□□ -0.96
HDAC3-208ENST00000476739 IMPG1Q17R60 797 aa9.03□□□□□ -0.96
HDAC3-208ENST00000476739 SPIN4Q56A73 249 aa9.03□□□□□ -0.96
HDAC3-208ENST00000476739 ACER2Q5QJU3 275 aa9.03□□□□□ -0.96
HDAC3-208ENST00000476739 ZNF468Q5VIY5 522 aaPredicted RBP9.03□□□□□ -0.96
HDAC3-208ENST00000476739 ACSM2BQ68CK6 577 aa9.03□□□□□ -0.96
HDAC3-208ENST00000476739 OR52E8Q6IFG1 317 aa9.03□□□□□ -0.96
HDAC3-208ENST00000476739 SLC48A1Q6P1K1 146 aa9.03□□□□□ -0.96
HDAC3-208ENST00000476739 GALNT18Q6P9A2 607 aa9.03□□□□□ -0.96
HDAC3-208ENST00000476739 CLYBLQ8N0X4 340 aa9.03□□□□□ -0.96
HDAC3-208ENST00000476739 ZADH2Q8N4Q0 377 aa9.03□□□□□ -0.96
HDAC3-208ENST00000476739 ZNF781Q8N8C0 355 aa9.03□□□□□ -0.96
HDAC3-208ENST00000476739 SLC2A12Q8TD20 617 aa9.03□□□□□ -0.96
HDAC3-208ENST00000476739 C16orf78Q8WTQ4 265 aa9.03□□□□□ -0.96
HDAC3-208ENST00000476739 THAP3Q8WTV1 239 aaPredicted RBP9.03□□□□□ -0.96
HDAC3-208ENST00000476739 TWIST2Q8WVJ9 160 aa9.03□□□□□ -0.96
HDAC3-208ENST00000476739 PNPLA2Q96AD5 504 aa9.03□□□□□ -0.96
HDAC3-208ENST00000476739 C3orf30Q96M34 536 aa9.03□□□□□ -0.96
HDAC3-208ENST00000476739 DGAT2Q96PD7 388 aa9.03□□□□□ -0.96
HDAC3-208ENST00000476739 OR8D2Q9GZM6 311 aa9.03□□□□□ -0.96
HDAC3-208ENST00000476739 EPS8L2Q9H6S3 715 aa9.03□□□□□ -0.96
HDAC3-208ENST00000476739 WDR41Q9HAD4 459 aa9.03□□□□□ -0.96
HDAC3-208ENST00000476739 EML4Q9HC35 981 aaKnown RBP9.03□□□□□ -0.96
HDAC3-208ENST00000476739 SIRT5Q9NXA8 310 aa9.03□□□□□ -0.96
HDAC3-208ENST00000476739 B3GNT3Q9Y2A9 372 aa9.03□□□□□ -0.96
HDAC3-208ENST00000476739 DLGAP4Q9Y2H0 992 aa9.03□□□□□ -0.96
HDAC3-208ENST00000476739 HEMK1Q9Y5R4 338 aaPredicted RBP9.03□□□□□ -0.96
HDAC3-208ENST00000476739 CLCA3PQ9Y6N3 262 aa9.03□□□□□ -0.96
HDAC3-208ENST00000476739 CROCCQ5TZA2 2017 aa9.02□□□□□ -0.97
HDAC3-208ENST00000476739 SPTA1P02549 2419 aa9.02□□□□□ -0.97
HDAC3-208ENST00000476739 GNG14A0A1W2PPG7 69 aa9.02□□□□□ -0.97
HDAC3-208ENST00000476739 C1orf226A1L170 272 aa9.02□□□□□ -0.97
HDAC3-208ENST00000476739 GOLGA6L10A6NI86 522 aa9.02□□□□□ -0.97
HDAC3-208ENST00000476739 LSM1O15116 133 aaKnown RBP9.02□□□□□ -0.97
HDAC3-208ENST00000476739 KLHL41O60662 606 aa9.02□□□□□ -0.97
HDAC3-208ENST00000476739 ZNF354AO60765 605 aaPredicted RBP9.02□□□□□ -0.97
HDAC3-208ENST00000476739 SEC22BO75396 215 aa9.02□□□□□ -0.97
HDAC3-208ENST00000476739 SKAP2O75563 359 aaPredicted RBP9.02□□□□□ -0.97
HDAC3-208ENST00000476739 HSPA4LO95757 839 aa9.02□□□□□ -0.97
HDAC3-208ENST00000476739 CLPSP04118 112 aa9.02□□□□□ -0.97
HDAC3-208ENST00000476739 SERPINE1P05121 402 aa9.02□□□□□ -0.97
HDAC3-208ENST00000476739 PRPH2P23942 346 aa9.02□□□□□ -0.97
HDAC3-208ENST00000476739 TACR1P25103 407 aa9.02□□□□□ -0.97
HDAC3-208ENST00000476739 PIK3R1P27986 724 aa9.02□□□□□ -0.97
HDAC3-208ENST00000476739 SOX18P35713 384 aa9.02□□□□□ -0.97
HDAC3-208ENST00000476739 SERPINB5P36952 375 aa9.02□□□□□ -0.97
HDAC3-208ENST00000476739 FEN1P39748 380 aaKnown RBP9.02□□□□□ -0.97
HDAC3-208ENST00000476739 ALDH9A1P49189 494 aa9.02□□□□□ -0.97
HDAC3-208ENST00000476739 TNFSF10P50591 281 aa9.02□□□□□ -0.97
HDAC3-208ENST00000476739 CLCN2P51788 898 aa9.02□□□□□ -0.97
HDAC3-208ENST00000476739 XKP51811 444 aa9.02□□□□□ -0.97
HDAC3-208ENST00000476739 MLF1P58340 268 aa9.02□□□□□ -0.97
HDAC3-208ENST00000476739 TRA2BP62995 288 aaKnown RBP9.02□□□□□ -0.97
HDAC3-208ENST00000476739 AP2B1P63010 937 aa9.02□□□□□ -0.97
HDAC3-208ENST00000476739 ERVK-8P63133 956 aa9.02□□□□□ -0.97
HDAC3-208ENST00000476739 ARG2P78540 354 aa9.02□□□□□ -0.97
HDAC3-208ENST00000476739 TLE1Q04724 770 aa9.02□□□□□ -0.97
HDAC3-208ENST00000476739 SRSF11Q05519 484 aaKnown RBP9.02□□□□□ -0.97
HDAC3-208ENST00000476739 IGFBP7Q16270 282 aa9.02□□□□□ -0.97
HDAC3-208ENST00000476739 MEP1AQ16819 746 aa9.02□□□□□ -0.97
HDAC3-208ENST00000476739 RFTN2Q52LD8 501 aaPredicted RBP9.02□□□□□ -0.97
HDAC3-208ENST00000476739 AGBL2Q5U5Z8 902 aa9.02□□□□□ -0.97
HDAC3-208ENST00000476739 ABHD17BQ5VST6 288 aa9.02□□□□□ -0.97
HDAC3-208ENST00000476739 RNF165Q6ZSG1 346 aa9.02□□□□□ -0.97
HDAC3-208ENST00000476739 HDXQ7Z353 690 aa9.02□□□□□ -0.97
HDAC3-208ENST00000476739 RPS19BP1Q86WX3 136 aaKnown RBP9.02□□□□□ -0.97
HDAC3-208ENST00000476739 HPS6Q86YV9 775 aa9.02□□□□□ -0.97
HDAC3-208ENST00000476739 DDIASQ8IXT1 998 aa9.02□□□□□ -0.97
HDAC3-208ENST00000476739 ST13P4Q8IZP2 240 aaPredicted RBP9.02□□□□□ -0.97
HDAC3-208ENST00000476739 TMEM132CQ8N3T6 1108 aa9.02□□□□□ -0.97
HDAC3-208ENST00000476739 OR4K14Q8NGD5 310 aa9.02□□□□□ -0.97
HDAC3-208ENST00000476739 OR1N1Q8NGS0 311 aa9.02□□□□□ -0.97
HDAC3-208ENST00000476739 OR14A16Q8NHC5 309 aa9.02□□□□□ -0.97
HDAC3-208ENST00000476739 PPP1R14CQ8TAE6 165 aa9.02□□□□□ -0.97
HDAC3-208ENST00000476739 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.02□□□□□ -0.97
HDAC3-208ENST00000476739 TM9SF4Q92544 642 aa9.02□□□□□ -0.97
HDAC3-208ENST00000476739 HAS2Q92819 552 aa9.02□□□□□ -0.97
HDAC3-208ENST00000476739 DAZLQ92904 295 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms