RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 ZNF607Q96SK3 696 aa15.61■□□□□ 0.09
TMEM53-208ENST00000476724 SLAMF7Q9NQ25 335 aa15.61■□□□□ 0.09
TMEM53-208ENST00000476724 TRPV5Q9NQA5 729 aa15.61■□□□□ 0.09
TMEM53-208ENST00000476724 ZSCAN32Q9NX65 697 aa15.61■□□□□ 0.09
TMEM53-208ENST00000476724 CFAP20Q9Y6A4 193 aaKnown RBP15.61■□□□□ 0.09
TMEM53-208ENST00000476724 TMEM265A0A087WTH1 108 aa15.6■□□□□ 0.09
TMEM53-208ENST00000476724 SH3BP5O60239 455 aa15.6■□□□□ 0.09
TMEM53-208ENST00000476724 MFN2O95140 757 aa15.6■□□□□ 0.09
TMEM53-208ENST00000476724 OXSR1O95747 527 aaPredicted RBP15.6■□□□□ 0.09
TMEM53-208ENST00000476724 BCHEP06276 602 aa15.6■□□□□ 0.09
TMEM53-208ENST00000476724 CD72P21854 359 aa15.6■□□□□ 0.09
TMEM53-208ENST00000476724 C21orf33P30042 268 aaPredicted RBP15.6■□□□□ 0.09
TMEM53-208ENST00000476724 TRIM23P36406 574 aa15.6■□□□□ 0.09
TMEM53-208ENST00000476724 MAGEA8P43361 318 aa15.6■□□□□ 0.09
TMEM53-208ENST00000476724 GSSP48637 474 aa15.6■□□□□ 0.09
TMEM53-208ENST00000476724 CRISP1P54107 249 aa15.6■□□□□ 0.09
TMEM53-208ENST00000476724 NCS1P62166 190 aa15.6■□□□□ 0.09
TMEM53-208ENST00000476724 OLR1P78380 273 aa15.6■□□□□ 0.09
TMEM53-208ENST00000476724 PUM1Q14671 1186 aaKnown RBP eCLIP15.6■□□□□ 0.09
TMEM53-208ENST00000476724 TIGD6Q17RP2 521 aa15.6■□□□□ 0.09
TMEM53-208ENST00000476724 SPDYE7PQ495Y7 208 aa15.6■□□□□ 0.09
TMEM53-208ENST00000476724 CYP27C1Q4G0S4 372 aa15.6■□□□□ 0.09
TMEM53-208ENST00000476724 SDE2Q6IQ49 451 aa15.6■□□□□ 0.09
TMEM53-208ENST00000476724 STX19Q8N4C7 294 aa15.6■□□□□ 0.09
TMEM53-208ENST00000476724 AQP11Q8NBQ7 271 aa15.6■□□□□ 0.09
TMEM53-208ENST00000476724 GANCQ8TET4 914 aa15.6■□□□□ 0.09
TMEM53-208ENST00000476724 FERD3LQ96RJ6 166 aa15.6■□□□□ 0.09
TMEM53-208ENST00000476724 RAB11FIP5Q9BXF6 653 aa15.6■□□□□ 0.09
TMEM53-208ENST00000476724 WDR26Q9H7D7 661 aa15.6■□□□□ 0.09
TMEM53-208ENST00000476724 UBE2ZQ9H832 354 aaPredicted RBP15.6■□□□□ 0.09
TMEM53-208ENST00000476724 CD93Q9NPY3 652 aa15.6■□□□□ 0.09
TMEM53-208ENST00000476724 LHX9Q9NQ69 397 aa15.6■□□□□ 0.09
TMEM53-208ENST00000476724 TM7SF3Q9NS93 570 aa15.6■□□□□ 0.09
TMEM53-208ENST00000476724 EHD3Q9NZN3 535 aa15.6■□□□□ 0.09
TMEM53-208ENST00000476724 OSGIN1Q9UJX0 560 aa15.6■□□□□ 0.09
TMEM53-208ENST00000476724 TMCC3Q9ULS5 477 aa15.6■□□□□ 0.09
TMEM53-208ENST00000476724 PLXND1Q9Y4D7 1925 aa15.6■□□□□ 0.09
TMEM53-208ENST00000476724 EFCAB10A6NFE3 127 aa15.59■□□□□ 0.09
TMEM53-208ENST00000476724 OR1F1O43749 312 aa15.59■□□□□ 0.09
TMEM53-208ENST00000476724 AIREO43918 545 aa15.59■□□□□ 0.09
TMEM53-208ENST00000476724 KCNJ13O60928 360 aa15.59■□□□□ 0.09
TMEM53-208ENST00000476724 RECKO95980 971 aa15.59■□□□□ 0.09
TMEM53-208ENST00000476724 PAK4O96013 591 aaPredicted RBP15.59■□□□□ 0.09
TMEM53-208ENST00000476724 ADAP00813 363 aa15.59■□□□□ 0.09
TMEM53-208ENST00000476724 CTSKP43235 329 aa15.59■□□□□ 0.09
TMEM53-208ENST00000476724 CLK1P49759 484 aaKnown RBP15.59■□□□□ 0.09
TMEM53-208ENST00000476724 SMIM11AP58511 58 aa15.59■□□□□ 0.09
TMEM53-208ENST00000476724 CSNK1G2P78368 415 aa15.59■□□□□ 0.09
TMEM53-208ENST00000476724 PRDX1Q06830 199 aaKnown RBP15.59■□□□□ 0.09
TMEM53-208ENST00000476724 GANABQ14697 944 aaKnown RBP15.59■□□□□ 0.09
TMEM53-208ENST00000476724 TBC1D25Q3MII6 688 aa15.59■□□□□ 0.09
TMEM53-208ENST00000476724 OR4C11Q6IEV9 310 aa15.59■□□□□ 0.09
TMEM53-208ENST00000476724 FRMPD2BQ6IN97 320 aa15.59■□□□□ 0.09
TMEM53-208ENST00000476724 ZNF770Q6IQ21 691 aaPredicted RBP15.59■□□□□ 0.09
TMEM53-208ENST00000476724 TNFAIP8L2Q6P589 184 aaPredicted RBP15.59■□□□□ 0.09
TMEM53-208ENST00000476724 SLC44A2Q8IWA5 706 aaPredicted RBP15.59■□□□□ 0.09
TMEM53-208ENST00000476724 MINDY2Q8NBR6 621 aa15.59■□□□□ 0.09
TMEM53-208ENST00000476724 TMEM19Q96HH6 336 aa15.59■□□□□ 0.09
TMEM53-208ENST00000476724 GAS2L1Q99501 681 aaPredicted RBP15.59■□□□□ 0.09
TMEM53-208ENST00000476724 NMNAT1Q9HAN9 279 aaPredicted RBP15.59■□□□□ 0.09
TMEM53-208ENST00000476724 PHPT1Q9NRX4 125 aaPredicted RBP15.59■□□□□ 0.09
TMEM53-208ENST00000476724 SIRT3Q9NTG7 399 aaPredicted RBP15.59■□□□□ 0.09
TMEM53-208ENST00000476724 CNOT2Q9NZN8 540 aaKnown RBP15.59■□□□□ 0.09
TMEM53-208ENST00000476724 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.59■□□□□ 0.09
TMEM53-208ENST00000476724 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.59■□□□□ 0.09
TMEM53-208ENST00000476724 CCDC88CQ9P219 2028 aa15.59■□□□□ 0.09
TMEM53-208ENST00000476724 FEZF1A0PJY2 475 aa15.59■□□□□ 0.09
TMEM53-208ENST00000476724 ZAR1LA6NP61 321 aa15.59■□□□□ 0.09
TMEM53-208ENST00000476724 M0R082 166 aa15.59■□□□□ 0.09
TMEM53-208ENST00000476724 SERPINB7O75635 380 aa15.59■□□□□ 0.09
TMEM53-208ENST00000476724 GASTP01350 101 aa15.59■□□□□ 0.09
TMEM53-208ENST00000476724 DNTTP04053 509 aa15.59■□□□□ 0.09
TMEM53-208ENST00000476724 LIPAP38571 399 aa15.59■□□□□ 0.09
TMEM53-208ENST00000476724 CCT3P49368 545 aaKnown RBP15.59■□□□□ 0.09
TMEM53-208ENST00000476724 SMAD4Q13485 552 aaKnown RBP15.59■□□□□ 0.09
TMEM53-208ENST00000476724 TMEM35AQ53FP2 167 aa15.59■□□□□ 0.09
TMEM53-208ENST00000476724 NIPAL1Q6NVV3 410 aa15.59■□□□□ 0.09
TMEM53-208ENST00000476724 KLHL17Q6TDP4 642 aa15.59■□□□□ 0.09
TMEM53-208ENST00000476724 OR14C36Q8NHC7 312 aa15.59■□□□□ 0.09
TMEM53-208ENST00000476724 ZNF675Q8TD23 568 aa15.59■□□□□ 0.09
TMEM53-208ENST00000476724 TIMM29Q9BSF4 260 aa15.59■□□□□ 0.09
TMEM53-208ENST00000476724 SLIRPQ9GZT3 109 aaKnown RBP15.59■□□□□ 0.09
TMEM53-208ENST00000476724 RMI1Q9H9A7 625 aa15.59■□□□□ 0.09
TMEM53-208ENST00000476724 DNAAF2Q9NVR5 837 aaKnown RBP15.59■□□□□ 0.09
TMEM53-208ENST00000476724 FTSJ1Q9UET6 329 aa15.59■□□□□ 0.09
TMEM53-208ENST00000476724 MGAT4BQ9UQ53 548 aa15.59■□□□□ 0.09
TMEM53-208ENST00000476724 TOR1BO14657 336 aa15.58■□□□□ 0.09
TMEM53-208ENST00000476724 TMPRSS11DO60235 418 aa15.58■□□□□ 0.09
TMEM53-208ENST00000476724 DRD1P21728 446 aa15.58■□□□□ 0.09
TMEM53-208ENST00000476724 PSMB5P28074 263 aa15.58■□□□□ 0.09
TMEM53-208ENST00000476724 ALDH4A1P30038 563 aa15.58■□□□□ 0.09
TMEM53-208ENST00000476724 KCNJ5P48544 419 aa15.58■□□□□ 0.09
TMEM53-208ENST00000476724 RAB28P51157 221 aa15.58■□□□□ 0.09
TMEM53-208ENST00000476724 LIM2P55344 173 aa15.58■□□□□ 0.09
TMEM53-208ENST00000476724 HSPB3Q12988 150 aa15.58■□□□□ 0.09
TMEM53-208ENST00000476724 IRF3Q14653 427 aa15.58■□□□□ 0.09
TMEM53-208ENST00000476724 IRF4Q15306 451 aa15.58■□□□□ 0.09
TMEM53-208ENST00000476724 SLC46A3Q7Z3Q1 461 aa15.58■□□□□ 0.09
TMEM53-208ENST00000476724 RPLP0P6Q8NHW5 317 aa15.58■□□□□ 0.09
TMEM53-208ENST00000476724 GTPBP3Q969Y2 492 aaKnown RBP15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms