RNA–Protein interactions for RNA: ENST00000475716.5

SNX5-208, Transcript of sorting nexin 5, humanhuman

TSL 3

Gene SNX5, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-208ENST00000475716 LINGO1Q96FE5 620 aa9.09□□□□□ -0.95
SNX5-208ENST00000475716 ZC3HAV1LQ96H79 300 aaKnown RBP9.09□□□□□ -0.95
SNX5-208ENST00000475716 SFXN3Q9BWM7 321 aa9.09□□□□□ -0.95
SNX5-208ENST00000475716 REG4Q9BYZ8 158 aa9.09□□□□□ -0.95
SNX5-208ENST00000475716 UBQLN3Q9H347 655 aa9.09□□□□□ -0.95
SNX5-208ENST00000475716 PELI2Q9HAT8 420 aa9.09□□□□□ -0.95
SNX5-208ENST00000475716 ZNF701Q9NV72 531 aaPredicted RBP9.09□□□□□ -0.95
SNX5-208ENST00000475716 SLC22A14Q9Y267 594 aa9.09□□□□□ -0.95
SNX5-208ENST00000475716 MRPS33Q9Y291 106 aaKnown RBP9.09□□□□□ -0.95
SNX5-208ENST00000475716 DYRK1BQ9Y463 629 aa9.09□□□□□ -0.95
SNX5-208ENST00000475716 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.08□□□□□ -0.96
SNX5-208ENST00000475716 BTNL10A8MVZ5 291 aa9.08□□□□□ -0.96
SNX5-208ENST00000475716 AP3B1O00203 1094 aa9.08□□□□□ -0.96
SNX5-208ENST00000475716 TNFSF13O75888 250 aa9.08□□□□□ -0.96
SNX5-208ENST00000475716 IGKV3-11P04433 115 aa9.08□□□□□ -0.96
SNX5-208ENST00000475716 CYP4B1P13584 511 aa9.08□□□□□ -0.96
SNX5-208ENST00000475716 PAMP19021 973 aa9.08□□□□□ -0.96
SNX5-208ENST00000475716 SERPINB3P29508 390 aa9.08□□□□□ -0.96
SNX5-208ENST00000475716 MSH2P43246 934 aa9.08□□□□□ -0.96
SNX5-208ENST00000475716 FBXW4P57775 412 aa9.08□□□□□ -0.96
SNX5-208ENST00000475716 SP140Q13342 867 aa9.08□□□□□ -0.96
SNX5-208ENST00000475716 CLEC12BQ2HXU8 276 aa9.08□□□□□ -0.96
SNX5-208ENST00000475716 C18orf21Q32NC0 220 aaPredicted RBP9.08□□□□□ -0.96
SNX5-208ENST00000475716 RBM20Q5T481 1227 aaKnown RBP9.08□□□□□ -0.96
SNX5-208ENST00000475716 ANKRD34AQ69YU3 496 aa9.08□□□□□ -0.96
SNX5-208ENST00000475716 ADNP2Q6IQ32 1131 aa9.08□□□□□ -0.96
SNX5-208ENST00000475716 ABHD17CQ6PCB6 329 aa9.08□□□□□ -0.96
SNX5-208ENST00000475716 ZNF474Q6S9Z5 364 aaPredicted RBP9.08□□□□□ -0.96
SNX5-208ENST00000475716 VN1R5Q7Z5H4 357 aa9.08□□□□□ -0.96
SNX5-208ENST00000475716 MYO1HQ8N1T3 1032 aa9.08□□□□□ -0.96
SNX5-208ENST00000475716 SLC15A4Q8N697 577 aa9.08□□□□□ -0.96
SNX5-208ENST00000475716 ATL1Q8WXF7 558 aa9.08□□□□□ -0.96
SNX5-208ENST00000475716 CALR3Q96L12 384 aaKnown RBP9.08□□□□□ -0.96
SNX5-208ENST00000475716 ZNF597Q96LX8 424 aa9.08□□□□□ -0.96
SNX5-208ENST00000475716 SERINC2Q96SA4 455 aa9.08□□□□□ -0.96
SNX5-208ENST00000475716 MAPKAP1Q9BPZ7 522 aa9.08□□□□□ -0.96
SNX5-208ENST00000475716 MED18Q9BUE0 208 aa9.08□□□□□ -0.96
SNX5-208ENST00000475716 G6PC3Q9BUM1 346 aa9.08□□□□□ -0.96
SNX5-208ENST00000475716 TSGA10Q9BZW7 698 aa9.08□□□□□ -0.96
SNX5-208ENST00000475716 PRDM7Q9NQW5 492 aa9.08□□□□□ -0.96
SNX5-208ENST00000475716 ZNF226Q9NYT6 803 aa9.08□□□□□ -0.96
SNX5-208ENST00000475716 COPS7AQ9UBW8 275 aa9.08□□□□□ -0.96
SNX5-208ENST00000475716 FBXO5Q9UKT4 447 aa9.08□□□□□ -0.96
SNX5-208ENST00000475716 COMMD10Q9Y6G5 202 aa9.08□□□□□ -0.96
SNX5-208ENST00000475716 DOCK7Q96N67 2140 aa9.08□□□□□ -0.96
SNX5-208ENST00000475716 ANKRD33BA6NCL7 494 aa9.07□□□□□ -0.96
SNX5-208ENST00000475716 WASHC1A8K0Z3 465 aa9.07□□□□□ -0.96
SNX5-208ENST00000475716 GNB5O14775 395 aa9.07□□□□□ -0.96
SNX5-208ENST00000475716 CD5LO43866 347 aa9.07□□□□□ -0.96
SNX5-208ENST00000475716 TGM6O95932 706 aa9.07□□□□□ -0.96
SNX5-208ENST00000475716 PLAUP00749 431 aa9.07□□□□□ -0.96
SNX5-208ENST00000475716 TP53P04637 393 aaPredicted RBP9.07□□□□□ -0.96
SNX5-208ENST00000475716 C1GALT1C1LP0DN25 315 aa9.07□□□□□ -0.96
SNX5-208ENST00000475716 GABRB3P28472 473 aa9.07□□□□□ -0.96
SNX5-208ENST00000475716 KCNJ1P48048 391 aa9.07□□□□□ -0.96
SNX5-208ENST00000475716 STARP49675 285 aa9.07□□□□□ -0.96
SNX5-208ENST00000475716 RGS4P49798 205 aa9.07□□□□□ -0.96
SNX5-208ENST00000475716 MTTPP55157 894 aa9.07□□□□□ -0.96
SNX5-208ENST00000475716 TBL3Q12788 808 aaKnown RBP9.07□□□□□ -0.96
SNX5-208ENST00000475716 SERTAD2Q14140 314 aa9.07□□□□□ -0.96
SNX5-208ENST00000475716 RCAN2Q14206 197 aa9.07□□□□□ -0.96
SNX5-208ENST00000475716 EFTUD2Q15029 972 aaKnown RBP eCLIP9.07□□□□□ -0.96
SNX5-208ENST00000475716 NTRK2Q16620 822 aa9.07□□□□□ -0.96
SNX5-208ENST00000475716 CHRFAM7AQ494W8 412 aa9.07□□□□□ -0.96
SNX5-208ENST00000475716 HSP90AA5PQ58FG0 334 aa9.07□□□□□ -0.96
SNX5-208ENST00000475716 ANKRD22Q5VYY1 191 aa9.07□□□□□ -0.96
SNX5-208ENST00000475716 TMIGD1Q6UXZ0 262 aa9.07□□□□□ -0.96
SNX5-208ENST00000475716 UBE3DQ7Z6J8 389 aa9.07□□□□□ -0.96
SNX5-208ENST00000475716 ADGRE4PQ86SQ3 457 aa9.07□□□□□ -0.96
SNX5-208ENST00000475716 FAM83FQ8NEG4 500 aaPredicted RBP9.07□□□□□ -0.96
SNX5-208ENST00000475716 OR2L5Q8NG80 312 aa9.07□□□□□ -0.96
SNX5-208ENST00000475716 TMEM171Q8WVE6 324 aa9.07□□□□□ -0.96
SNX5-208ENST00000475716 STARD4Q96DR4 205 aa9.07□□□□□ -0.96
SNX5-208ENST00000475716 HES6Q96HZ4 224 aa9.07□□□□□ -0.96
SNX5-208ENST00000475716 RILPQ96NA2 401 aa9.07□□□□□ -0.96
SNX5-208ENST00000475716 FAM111AQ96PZ2 611 aa9.07□□□□□ -0.96
SNX5-208ENST00000475716 F2RL3Q96RI0 385 aa9.07□□□□□ -0.96
SNX5-208ENST00000475716 GAL3ST4Q96RP7 486 aa9.07□□□□□ -0.96
SNX5-208ENST00000475716 TM9SF2Q99805 663 aa9.07□□□□□ -0.96
SNX5-208ENST00000475716 ANGPTL4Q9BY76 406 aa9.07□□□□□ -0.96
SNX5-208ENST00000475716 FRMD8P1Q9BZ68 369 aaPredicted RBP9.07□□□□□ -0.96
SNX5-208ENST00000475716 REXO4Q9GZR2 422 aaKnown RBP9.07□□□□□ -0.96
SNX5-208ENST00000475716 PIGMQ9H3S5 423 aa9.07□□□□□ -0.96
SNX5-208ENST00000475716 IARS2Q9NSE4 1012 aaKnown RBP9.07□□□□□ -0.96
SNX5-208ENST00000475716 C20orf96Q9NUD7 363 aaPredicted RBP9.07□□□□□ -0.96
SNX5-208ENST00000475716 C15orf41Q9Y2V0 281 aa9.07□□□□□ -0.96
SNX5-208ENST00000475716 IKBKGQ9Y6K9 419 aa9.07□□□□□ -0.96
SNX5-208ENST00000475716 C2orf72A6NCS6 295 aa9.06□□□□□ -0.96
SNX5-208ENST00000475716 MIF4GDA9UHW6 222 aaKnown RBP9.06□□□□□ -0.96
SNX5-208ENST00000475716 RTCAO00442 366 aaKnown RBP9.06□□□□□ -0.96
SNX5-208ENST00000475716 TLX2O43763 284 aaPredicted RBP9.06□□□□□ -0.96
SNX5-208ENST00000475716 FGF17O60258 216 aa9.06□□□□□ -0.96
SNX5-208ENST00000475716 H2AFYO75367 372 aaKnown RBP9.06□□□□□ -0.96
SNX5-208ENST00000475716 SMNDC1O75940 238 aaKnown RBP eCLIP9.06□□□□□ -0.96
SNX5-208ENST00000475716 CPN1P15169 458 aa9.06□□□□□ -0.96
SNX5-208ENST00000475716 TPSB2P20231 275 aa9.06□□□□□ -0.96
SNX5-208ENST00000475716 CD79BP40259 229 aa9.06□□□□□ -0.96
SNX5-208ENST00000475716 GDF5P43026 501 aa9.06□□□□□ -0.96
SNX5-208ENST00000475716 RPL21P46778 160 aaKnown RBP9.06□□□□□ -0.96
SNX5-208ENST00000475716 STT3AP46977 705 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms