RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 HPGDSO60760 199 aa16.88■□□□□ 0.29
CCM2-207ENST00000475551 SOX14O95416 240 aa16.88■□□□□ 0.29
CCM2-207ENST00000475551 IGFBP1P08833 259 aaPredicted RBP16.88■□□□□ 0.29
CCM2-207ENST00000475551 DDX5P17844 614 aaKnown RBP16.88■□□□□ 0.29
CCM2-207ENST00000475551 FGF9P31371 208 aaPredicted RBP16.88■□□□□ 0.29
CCM2-207ENST00000475551 ETV5P41161 510 aa16.88■□□□□ 0.29
CCM2-207ENST00000475551 ETV1P50549 477 aa16.88■□□□□ 0.29
CCM2-207ENST00000475551 AP1S2P56377 157 aa16.88■□□□□ 0.29
CCM2-207ENST00000475551 WNT4P56705 351 aa16.88■□□□□ 0.29
CCM2-207ENST00000475551 AP1S1P61966 158 aa16.88■□□□□ 0.29
CCM2-207ENST00000475551 POU6F2P78424 691 aaPredicted RBP16.88■□□□□ 0.29
CCM2-207ENST00000475551 IL18Q14116 193 aa16.88■□□□□ 0.29
CCM2-207ENST00000475551 CRTC2Q53ET0 693 aaPredicted RBP16.88■□□□□ 0.29
CCM2-207ENST00000475551 KLHL22Q53GT1 634 aa16.88■□□□□ 0.29
CCM2-207ENST00000475551 XKR6Q5GH73 641 aa16.88■□□□□ 0.29
CCM2-207ENST00000475551 TRILQ7L0X0 811 aa16.88■□□□□ 0.29
CCM2-207ENST00000475551 HDDC2Q7Z4H3 204 aa16.88■□□□□ 0.29
CCM2-207ENST00000475551 BCDIN3DQ7Z5W3 292 aaKnown RBP16.88■□□□□ 0.29
CCM2-207ENST00000475551 FAM26EQ8N5C1 309 aa16.88■□□□□ 0.29
CCM2-207ENST00000475551 SYT14Q8NB59 555 aa16.88■□□□□ 0.29
CCM2-207ENST00000475551 TM9SF4Q92544 642 aa16.88■□□□□ 0.29
CCM2-207ENST00000475551 ZDHHC3Q9NYG2 299 aa16.88■□□□□ 0.29
CCM2-207ENST00000475551 ING4Q9UNL4 249 aa16.88■□□□□ 0.29
CCM2-207ENST00000475551 ANGPT4Q9Y264 503 aa16.88■□□□□ 0.29
CCM2-207ENST00000475551 YARS2Q9Y2Z4 477 aaKnown RBP16.88■□□□□ 0.29
CCM2-207ENST00000475551 ZNF106Q9H2Y7 1883 aaKnown RBP16.88■□□□□ 0.29
CCM2-207ENST00000475551 PIKFYVEQ9Y2I7 2098 aa16.88■□□□□ 0.29
CCM2-207ENST00000475551 SMIM30A4D0T7 59 aa16.88■□□□□ 0.29
CCM2-207ENST00000475551 SNTNA6NMZ2 147 aa16.88■□□□□ 0.29
CCM2-207ENST00000475551 H0YIV9 168 aa16.88■□□□□ 0.29
CCM2-207ENST00000475551 GFYI3L273 518 aa16.88■□□□□ 0.29
CCM2-207ENST00000475551 SCO1O75880 301 aa16.88■□□□□ 0.29
CCM2-207ENST00000475551 ARAFP10398 606 aa16.88■□□□□ 0.29
CCM2-207ENST00000475551 LHCGRP22888 699 aa16.88■□□□□ 0.29
CCM2-207ENST00000475551 ATP5C1P36542 298 aaKnown RBP16.88■□□□□ 0.29
CCM2-207ENST00000475551 FOXD4Q12950 439 aaPredicted RBP16.88■□□□□ 0.29
CCM2-207ENST00000475551 SLC25A30Q5SVS4 291 aa16.88■□□□□ 0.29
CCM2-207ENST00000475551 PXDC1Q5TGL8 231 aa16.88■□□□□ 0.29
CCM2-207ENST00000475551 C16orf59Q7L2K0 433 aa16.88■□□□□ 0.29
CCM2-207ENST00000475551 SKA2Q8WVK7 121 aaPredicted RBP16.88■□□□□ 0.29
CCM2-207ENST00000475551 ATG10Q9H0Y0 220 aa16.88■□□□□ 0.29
CCM2-207ENST00000475551 RERGLQ9H628 205 aa16.88■□□□□ 0.29
CCM2-207ENST00000475551 RC3H2Q9HBD1 1191 aaKnown RBP16.88■□□□□ 0.29
CCM2-207ENST00000475551 RAB23Q9ULC3 237 aa16.88■□□□□ 0.29
CCM2-207ENST00000475551 EXO1Q9UQ84 846 aaKnown RBP16.88■□□□□ 0.29
CCM2-207ENST00000475551 FCF1Q9Y324 198 aaKnown RBP16.88■□□□□ 0.29
CCM2-207ENST00000475551 Q9Y3F1 56 aa16.88■□□□□ 0.29
CCM2-207ENST00000475551 SCN8AQ9UQD0 1980 aa16.87■□□□□ 0.29
CCM2-207ENST00000475551 H3BN98 237 aa16.87■□□□□ 0.29
CCM2-207ENST00000475551 TMEM189-UBE2V1I3L0A0 370 aa16.87■□□□□ 0.29
CCM2-207ENST00000475551 BET1O15155 118 aa16.87■□□□□ 0.29
CCM2-207ENST00000475551 INPPL1O15357 1258 aa16.87■□□□□ 0.29
CCM2-207ENST00000475551 ETHE1O95571 254 aa16.87■□□□□ 0.29
CCM2-207ENST00000475551 INPP1P49441 399 aa16.87■□□□□ 0.29
CCM2-207ENST00000475551 LIM2P55344 173 aa16.87■□□□□ 0.29
CCM2-207ENST00000475551 MFSD13AQ14CX5 517 aa16.87■□□□□ 0.29
CCM2-207ENST00000475551 C3orf38Q5JPI3 329 aa16.87■□□□□ 0.29
CCM2-207ENST00000475551 ADAM2Q99965 735 aa16.87■□□□□ 0.29
CCM2-207ENST00000475551 PPIL3Q9H2H8 161 aaKnown RBP16.87■□□□□ 0.29
CCM2-207ENST00000475551 RANBP3Q9H6Z4 567 aaPredicted RBP16.87■□□□□ 0.29
CCM2-207ENST00000475551 SLC28A3Q9HAS3 691 aa16.87■□□□□ 0.29
CCM2-207ENST00000475551 HMX1Q9NP08 348 aaPredicted RBP16.87■□□□□ 0.29
CCM2-207ENST00000475551 MALT1Q9UDY8 824 aa16.87■□□□□ 0.29
CCM2-207ENST00000475551 ASB4Q9Y574 426 aa16.87■□□□□ 0.29
CCM2-207ENST00000475551 ISM1B1AKI9 464 aa16.87■□□□□ 0.29
CCM2-207ENST00000475551 C6orf47O95873 294 aa16.87■□□□□ 0.29
CCM2-207ENST00000475551 CHRM5P08912 532 aaPredicted RBP16.87■□□□□ 0.29
CCM2-207ENST00000475551 NR2F6P10588 404 aa16.87■□□□□ 0.29
CCM2-207ENST00000475551 HNF1BP35680 557 aa16.87■□□□□ 0.29
CCM2-207ENST00000475551 PUM1Q14671 1186 aaKnown RBP eCLIP16.87■□□□□ 0.29
CCM2-207ENST00000475551 CTXN3Q4LDR2 81 aa16.87■□□□□ 0.29
CCM2-207ENST00000475551 SPIN4Q56A73 249 aa16.87■□□□□ 0.29
CCM2-207ENST00000475551 CD200R1LQ6Q8B3 271 aa16.87■□□□□ 0.29
CCM2-207ENST00000475551 ZNF598Q86UK7 904 aaKnown RBP16.87■□□□□ 0.29
CCM2-207ENST00000475551 ZNF280BQ86YH2 543 aa16.87■□□□□ 0.29
CCM2-207ENST00000475551 SLC30A8Q8IWU4 369 aa16.87■□□□□ 0.29
CCM2-207ENST00000475551 OR8H3Q8N146 312 aa16.87■□□□□ 0.29
CCM2-207ENST00000475551 OR4K1Q8NGD4 311 aa16.87■□□□□ 0.29
CCM2-207ENST00000475551 ZNF431Q8TF32 576 aaPredicted RBP16.87■□□□□ 0.29
CCM2-207ENST00000475551 ATF6BQ99941 703 aa16.87■□□□□ 0.29
CCM2-207ENST00000475551 AIFM2Q9BRQ8 373 aa16.87■□□□□ 0.29
CCM2-207ENST00000475551 I3L521 148 aa16.86■□□□□ 0.29
CCM2-207ENST00000475551 CHP2O43745 196 aa16.86■□□□□ 0.29
CCM2-207ENST00000475551 TPOP07202 933 aa16.86■□□□□ 0.29
CCM2-207ENST00000475551 TIA1P31483 386 aaKnown RBP eCLIP16.86■□□□□ 0.29
CCM2-207ENST00000475551 GABRA5P31644 462 aa16.86■□□□□ 0.29
CCM2-207ENST00000475551 CAV3P56539 151 aa16.86■□□□□ 0.29
CCM2-207ENST00000475551 DOC2AQ14183 400 aa16.86■□□□□ 0.29
CCM2-207ENST00000475551 SUZ12Q15022 739 aaKnown RBP16.86■□□□□ 0.29
CCM2-207ENST00000475551 SEC23BQ15437 767 aa16.86■□□□□ 0.29
CCM2-207ENST00000475551 GRHL2Q6ISB3 625 aa16.86■□□□□ 0.29
CCM2-207ENST00000475551 GDF6Q6KF10 455 aaPredicted RBP16.86■□□□□ 0.29
CCM2-207ENST00000475551 TMEM107Q6UX40 140 aa16.86■□□□□ 0.29
CCM2-207ENST00000475551 ZNF783Q6ZMS7 281 aa16.86■□□□□ 0.29
CCM2-207ENST00000475551 TPGS1Q6ZTW0 290 aa16.86■□□□□ 0.29
CCM2-207ENST00000475551 FBXO22Q8NEZ5 403 aa16.86■□□□□ 0.29
CCM2-207ENST00000475551 APOBEC4Q8WW27 367 aaKnown RBP16.86■□□□□ 0.29
CCM2-207ENST00000475551 PKP4Q99569 1192 aa16.86■□□□□ 0.29
CCM2-207ENST00000475551 POLDIP3Q9BY77 421 aaKnown RBP16.86■□□□□ 0.29
CCM2-207ENST00000475551 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms